Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rmnd5b

Gene Name Gene ID Reads Annotation
rmnd5b ENSDARG00000043359 3054 required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]










Genes with expression patterns similar to rmnd5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rmnd5b ENSDARG00000043359 3054 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
2. RNF38 ENSDARG00000062055 3901 2.506 - - - - 0.940 0.844 0.722 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
3. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 2.484 - 0.722 - - 0.946 - 0.816 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
4. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 2.293 - 0.729 - - 0.859 - 0.705 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
5. cdk12 ENSDARG00000063726 1220 1.765 - - - - 0.975 0.790 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
6. h2afy2_1 ENSDARG00000087897 9887 1.757 - - - - 0.890 0.867 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
7. scocb ENSDARG00000002217 1844 1.754 - - - - 0.952 0.802 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
8. C7H4orf48 C7H4orf48 1455 1.748 - - - - 0.953 0.795 - - -
9. cand1 ENSDARG00000017841 8164 1.738 - - - - 0.955 0.783 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
10. ARHGAP23 ARHGAP23 3946 1.72 - - - - 0.936 0.784 - - -
11. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.702 - - - - 0.952 0.750 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
12. rbm28 ENSDARG00000025332 2685 1.698 - - - - 0.945 0.753 - - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
13. e2f7 ENSDARG00000008986 1439 1.696 - 0.747 - - 0.949 - - - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
14. fmr1 ENSDARG00000037433 5132 1.689 - - - - 0.969 - 0.720 - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
15. CABZ01076275.1 ENSDARG00000100753 5137 1.688 - - - - 0.951 - 0.737 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
16. nhsl1b ENSDARG00000042627 3697 1.685 - 0.741 - - 0.944 - - - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
17. plp1a ENSDARG00000103732 3544 1.683 - - - - 0.942 0.741 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
18. gars ENSDARG00000059070 17015 1.679 - - - - 0.955 - 0.724 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
19. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.678 - - - - 0.955 0.723 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
20. rc3h1 rc3h1 1087 1.677 - - - - 0.955 - - 0.722 -
21. sipa1l2 ENSDARG00000061640 4545 1.663 - - - - 0.917 0.746 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
22. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.652 - - - - 0.947 - 0.705 - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
23. ubr4 ENSDARG00000009549 5565 1.65 - - - - 0.916 - - 0.734 - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
24. cox6c ENSDARG00000038577 16845 1.611 - - - - 0.790 - 0.821 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
25. psma4 ENSDARG00000045928 5112 1.594 - - - - - 0.884 0.710 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
26. USMG5 USMG5 10356 1.586 - - - - 0.873 - 0.713 - -
27. nop58 ENSDARG00000104353 8497 1.584 - 0.747 - - 0.837 - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
28. Sep-02 Sep-02 10074 1.584 - - - - - 0.776 0.808 - -
29. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.568 - - - - - 0.792 0.776 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
30. rac1 rac1 7341 1.562 - - - - - 0.789 0.773 - -
31. plcg1 ENSDARG00000038442 5324 1.551 - - - - 0.812 0.739 - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
32. SERBP1 SERBP1 9276 1.551 - 0.755 - - - 0.796 - - -
33. ptenb ENSDARG00000056623 5783 1.551 - - - - 0.817 - 0.734 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
34. psenen ENSDARG00000068698 2777 1.551 - - - - - 0.822 0.729 - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
35. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.55 - 0.719 - - - 0.831 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
36. znf710a ENSDARG00000014680 582 1.545 - - - - - 0.802 - 0.743 - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
37. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.545 - 0.733 - - - - 0.812 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
38. UNKL ENSDARG00000037838 1086 1.543 - - - - - 0.815 - 0.728 - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
39. tead3a ENSDARG00000074321 2240 1.537 - - - 0.740 - - 0.797 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
40. hnrpl 6412 1.535 - 0.718 - - 0.817 - - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
41. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.534 - - - - - 0.815 0.719 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
42. slc7a6os ENSDARG00000010596 1599 1.532 - - - - - 0.782 0.750 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
43. qki2 ENSDARG00000010018 2230 1.53 - 0.705 - - - 0.825 - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
44. taf11 ENSDARG00000037855 2624 1.527 - - - - - 0.766 0.761 - - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
45. puf60b ENSDARG00000001241 13827 1.526 - - - - 0.810 0.716 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
46. TNS3 TNS3 1286 1.524 - 0.823 - - - 0.701 - - -
47. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.523 - 0.791 - - - - - 0.732 - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
48. tiparp ENSDARG00000061841 3642 1.521 - 0.728 - - - 0.793 - - - TCDD-inducible poly(ADP-ribose) polymerase [Source:ZFIN;Acc:ZDB-GENE-031002-47]
49. atp5j 4272 1.51 - 0.756 - - - - 0.754 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
50. arglu1a ENSDARG00000019223 8716 1.508 - 0.764 - - - 0.744 - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
51. mrpl17 ENSDARG00000075677 1840 1.486 - - - - - - 0.761 0.725 - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
52. SNRPG ENSDARG00000099667 18697 1.48 - 0.764 - - - - 0.716 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
53. rps8a ENSDARG00000055996 2785 1.48 - 0.775 - - - - 0.705 - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
54. pcca ENSDARG00000028982, ENSDARG00000110281 3212 1.467 - 0.746 - - - - 0.721 - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
55. eif4h ENSDARG00000042252 6742 1.466 - - - - - 0.760 0.706 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
56. angptl4 ENSDARG00000035859 2701 1.465 - 0.720 - - - - 0.745 - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
57. hsbp1b ENSDARG00000041921 6170 1.465 - 0.728 - - 0.737 - - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
58. hspa14 ENSDARG00000058030, ENSDARG00000112257, ENSDARG00000114313 1614 1.458 - 0.724 - - - - 0.734 - - heat shock protein 14 [Source:ZFIN;Acc:ZDB-GENE-041210-73]
59. ubn2 ubn2 534 1.452 - - - - - 0.722 - 0.730 -
60. arhgef2 ENSDARG00000075819 2173 1.447 - 0.713 - - - 0.734 - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
61. MATR3 MATR3 3962 1.443 - - - - - 0.722 0.721 - -
62. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.434 - - - - 0.710 0.724 - - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
63. fam60al 2846 1.433 - 0.703 - - - 0.730 - - - family with sequence similarity 60, member A, like
64. thoc2 ENSDARG00000037503 8711 1.433 - - - - 0.709 - 0.724 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
65. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.432 - - - - - 0.703 - 0.729 - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
66. snrpf ENSDARG00000105037 10241 1.428 - - - - - 0.709 0.719 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
67. ndufs6 ENSDARG00000056583 7220 1.427 - 0.718 - - - - 0.709 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
68. kifc1 ENSDARG00000001558 6658 0.984 - - - - 0.984 - - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
69. NRD1 NRD1 3486 0.97 - - - - 0.970 - - - -
70. fmnl2b ENSDARG00000075041 1744 0.97 - - - - 0.970 - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
71. dbx2 2971 0.963 - - - - 0.963 - - - - developing brain homeobox 2
72. srrm1 ENSDARG00000001244 4972 0.958 - - - - 0.958 - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
73. e2f5 ENSDARG00000038812 388 0.957 - - - - 0.957 - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
74. ZBTB22 ZBTB22 1053 0.957 - - - - 0.957 - - - -
75. MEX3D MEX3D 293 0.957 - - - - 0.957 - - - -
76. si:ch211-223a21.1 ENSDARG00000098892 306 0.957 - - - - 0.957 - - - - si:ch211-223a21.1 [Source:ZFIN;Acc:ZDB-GENE-110913-137]
77. d2hgdh ENSDARG00000060210 362 0.957 - - - - 0.957 - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
78. ATXN7 ENSDARG00000074804 1137 0.956 - - - - 0.956 - - - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
79. ift140 ENSDARG00000031886 573 0.955 - - - - 0.955 - - - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
80. CCDC106 CCDC106 1908 0.955 - - - - 0.955 - - - -
81. rad50 ENSDARG00000038917 1105 0.955 - - - - 0.955 - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
82. si:ch211-132g1.3 ENSDARG00000089477 769 0.955 - - - - 0.955 - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
83. TIMM21 ENSDARG00000071594 722 0.955 - - - - 0.955 - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
84. SRR SRR 544 0.954 - - - - 0.954 - - - -
85. zgc:66443 ENSDARG00000057707 624 0.954 - - - - 0.954 - - - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
86. sptlc2a ENSDARG00000018976 937 0.954 - - - - 0.954 - - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
87. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.954 - - - - 0.954 - - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
88. drgx ENSDARG00000069329 610 0.954 - - - - 0.954 - - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
89. ftsjd2 ftsjd2 2694 0.953 - - - - 0.953 - - - -
90. rnf185 ENSDARG00000032997 1490 0.953 - - - - 0.953 - - - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
91. TANC2 TANC2 1104 0.953 - - - - 0.953 - - - -
92. parp12b ENSDARG00000057974, ENSDARG00000115844 1435 0.952 - - - - 0.952 - - - - poly (ADP-ribose) polymerase family, member 12b [Source:ZFIN;Acc:ZDB-GENE-030131-2617]
93. psma3 ENSDARG00000086618 6200 0.952 - - - - 0.952 - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
94. lppr3a lppr3a 1294 0.952 - - - - 0.952 - - - -
95. MAP4_1 MAP4_1 1153 0.952 - - - - 0.952 - - - -
96. cicb ENSDARG00000055502 1356 0.952 - - - - 0.952 - - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
97. dgkh ENSDARG00000018716 795 0.952 - - - - 0.952 - - - - diacylglycerol kinase, eta [Source:ZFIN;Acc:ZDB-GENE-070912-328]
98. hsf2 ENSDARG00000053097 1188 0.952 - - - - 0.952 - - - - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
99. chd2 ENSDARG00000060687 3832 0.952 - - - - 0.952 - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
100. ppm1la ENSDARG00000063218 2142 0.952 - - - - 0.952 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]

There are 1779 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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