Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rmdn3

Gene Name Gene ID Reads Annotation
rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]










Genes with expression patterns similar to rmdn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
2. mettl1 ENSDARG00000076518 366 2.279 - 0.865 - 0.700 - - 0.714 - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
3. zgc:113385 zgc:113385 297 1.77 0.843 0.927 - - - - - - -
4. si:ch211-105d18.6 si:ch211-105d18.6 59 1.752 - 0.955 - - - - 0.797 - -
5. lcn15 ENSDARG00000067851 140 1.734 0.873 0.861 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
6. CABZ01085085.1 CABZ01085085.1 123 1.692 - 0.899 - - - - 0.793 - -
7. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 1.667 0.714 0.953 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
8. cables1 ENSDARG00000099395 361 1.66 0.872 - - 0.788 - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
9. SFT2D2_1 SFT2D2_1 219 1.643 0.873 - - - - - 0.770 - -
10. si:ch211-51h9.7 ENSDARG00000074720 227 1.643 - 0.935 - - - - 0.708 - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
11. RBMS1 RBMS1 258 1.628 0.709 0.919 - - - - - - -
12. gna13a ENSDARG00000073765 925 1.619 - 0.887 - 0.732 - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
13. pdf ENSDARG00000013950 293 1.614 - 0.907 - 0.707 - - - - - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
14. cart1 ENSDARG00000070930 46 1.613 0.873 - - - - - 0.740 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
15. aqp7 ENSDARG00000026787 37 1.608 0.801 - - - - - 0.807 - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
16. CABZ01085888.1 CABZ01085888.1 868 1.607 0.751 0.856 - - - - - - -
17. gtf3c6 ENSDARG00000043301 97 1.598 - - - 0.859 - 0.739 - - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
18. spon2b ENSDARG00000002732 115 1.586 - - - 0.791 - - 0.795 - - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
19. lzts2b ENSDARG00000077207 22 1.586 - - - 0.846 - - 0.740 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
20. fgf10b ENSDARG00000100475 17 1.584 0.873 - - - - - 0.711 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
21. si:ch211-255g12.8 ENSDARG00000069627 22 1.574 0.873 - - - - - 0.701 - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
22. phactr3b ENSDARG00000019304 447 1.548 0.726 0.822 - - - - - - - phosphatase and actin regulator 3b [Source:ZFIN;Acc:ZDB-GENE-050522-156]
23. c1d ENSDARG00000021112 2839 1.527 0.731 0.796 - - - - - - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
24. wars2 ENSDARG00000011801 134 1.525 0.786 - - 0.739 - - - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
25. prkcsh ENSDARG00000004470 1424 1.486 - 0.747 - 0.739 - - - - - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
26. zgc:194621 ENSDARG00000074696 85 1.464 0.714 - - 0.750 - - - - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
27. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.456 - 0.716 - - - - 0.740 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
28. si:ch73-109d9.1 ENSDARG00000052019 248 1.448 - - - 0.721 - - 0.727 - - si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
29. rsph9 ENSDARG00000017355 144 1.411 - - - 0.707 - 0.704 - - - radial spoke head 9 homolog [Source:ZFIN;Acc:ZDB-GENE-051120-129]
30. sergef ENSDARG00000070986, ENSDARG00000111782 48 0.988 0.988 - - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
31. nipsnap1 ENSDARG00000005320 330 0.977 - 0.977 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
32. CYSTM1 CYSTM1 176 0.976 - 0.976 - - - - - - -
33. acad11 ENSDARG00000045411 350 0.972 - 0.972 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
34. tmem150a tmem150a 543 0.971 - 0.971 - - - - - - -
35. si:ch211-215d8.2 ENSDARG00000093233 784 0.97 - 0.970 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
36. si:dkey-154p10.3 ENSDARG00000068366 153 0.969 - 0.969 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
37. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.969 - 0.969 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
38. unc13d ENSDARG00000078249 91 0.967 - 0.967 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
39. pgap2 ENSDARG00000044596 60 0.966 - 0.966 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
40. NUDT8 ENSDARG00000007722 329 0.965 - 0.965 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
41. si:ch1073-155h21.1 ENSDARG00000007582 137 0.963 - 0.963 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
42. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.963 - 0.963 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
43. RNF130 ENSDARG00000089767 559 0.962 - 0.962 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
44. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.962 - 0.962 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
45. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.962 - 0.962 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
46. kcnj1a.4 ENSDARG00000090635 356 0.961 - 0.961 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
47. smdt1 smdt1 99 0.959 - 0.959 - - - - - - -
48. si:dkey-114b16.4 si:dkey-114b16.4 35 0.959 - 0.959 - - - - - - -
49. UBASH3B UBASH3B 292 0.959 - 0.959 - - - - - - -
50. CABZ01066717.1 CABZ01066717.1 351 0.959 - 0.959 - - - - - - -
51. cyp2aa1 ENSDARG00000099003 297 0.958 - 0.958 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
52. ACKR3 ACKR3 235 0.958 - 0.958 - - - - - - -
53. CT573322.1 CT573322.1 38 0.958 - 0.958 - - - - - - -
54. MAP3K2 ENSDARG00000062884 34 0.958 - 0.958 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
55. si:ch211-39a7.1 ENSDARG00000037427 31 0.957 - 0.957 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
56. ZP2 ZP2 14 0.957 - 0.957 - - - - - - -
57. plekhg6 ENSDARG00000086056 368 0.957 - 0.957 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
58. SLC38A9 ENSDARG00000032769 35 0.957 - 0.957 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
59. CABZ01109624.1 CABZ01109624.1 25 0.957 - 0.957 - - - - - - -
60. ppapdc2 ppapdc2 67 0.957 - 0.957 - - - - - - -
61. U3_5 U3_5 67 0.957 - 0.957 - - - - - - -
62. si:dkey-228i19.34 si:dkey-228i19.34 43 0.957 - 0.957 - - - - - - -
63. cacng6a ENSDARG00000036457 344 0.956 - 0.956 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
64. CABZ01114089.1 CABZ01114089.1 127 0.956 - 0.956 - - - - - - -
65. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.956 - 0.956 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
66. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.956 - 0.956 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
67. rnf34a ENSDARG00000038300 179 0.956 - 0.956 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
68. casp2 ENSDARG00000062052 559 0.956 - 0.956 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
69. unc93a ENSDARG00000041554 427 0.955 - 0.955 - - - - - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
70. usp45 ENSDARG00000075013 227 0.955 - 0.955 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
71. CR388047.3 ENSDARG00000117023 89 0.955 - 0.955 - - - - - - -
72. C12H10orf2 C12H10orf2 245 0.954 - 0.954 - - - - - - -
73. fam217b ENSDARG00000088505 104 0.954 0.954 - - - - - - - - family with sequence similarity 217, member B [Source:ZFIN;Acc:ZDB-GENE-090313-236]
74. TEAD1 TEAD1 43 0.953 - 0.953 - - - - - - -
75. ormdl2 ENSDARG00000058022 1146 0.952 - 0.952 - - - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
76. kcnk13a ENSDARG00000008212 136 0.952 - 0.952 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
77. zgc:109744 ENSDARG00000070800 262 0.951 - 0.951 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
78. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.951 - 0.951 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
79. wnt6b ENSDARG00000073935 236 0.951 - 0.951 - - - - - - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
80. grk5 ENSDARG00000032801 490 0.951 - 0.951 - - - - - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
81. tex261 ENSDARG00000044584 513 0.949 - 0.949 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
82. foxn4 ENSDARG00000010591 2332 0.948 - 0.948 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
83. gpam ENSDARG00000074169 488 0.948 - 0.948 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
84. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.946 - 0.946 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
85. kremen1 ENSDARG00000062579 190 0.946 - 0.946 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
86. cd74a ENSDARG00000009087 20 0.946 - 0.946 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
87. TM2D2 ENSDARG00000035515 561 0.945 - 0.945 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
88. plce1 ENSDARG00000087921 44 0.945 - 0.945 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
89. rab33ba ENSDARG00000052290 914 0.945 - 0.945 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
90. fam57ba ENSDARG00000026875 504 0.944 - 0.944 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
91. cflara ENSDARG00000055966 464 0.944 - 0.944 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
92. fam105bb fam105bb 1253 0.944 - 0.944 - - - - - - -
93. fam63b 484 0.944 - 0.944 - - - - - - - family with sequence similarity 63, member B
94. sh3pxd2aa ENSDARG00000060148 913 0.944 - 0.944 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
95. casp3b ENSDARG00000055045 54 0.943 - 0.943 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
96. rab40c ENSDARG00000061208 1072 0.943 - 0.943 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
97. btbd6a ENSDARG00000076440 748 0.942 - 0.942 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
98. pc pc 116 0.942 - 0.942 - - - - - - -
99. ATP5J 343 0.941 - 0.941 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
100. CR376783.1 ENSDARG00000074235 259 0.941 - 0.941 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA