Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ripply1

Gene Name Gene ID Reads Annotation
ripply1 ENSDARG00000054103 367 ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]










Genes with expression patterns similar to ripply1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ripply1 ENSDARG00000054103 367 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
2. si:ch211-134c9.2 ENSDARG00000095593 86 2.481 0.860 - - - - - 0.728 0.893 - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
3. ttc12 ENSDARG00000056896 97 2.35 - 0.754 0.749 0.847 - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
4. wdr16 wdr16 532 2.183 - - - 0.733 0.712 - - 0.738 -
5. gdf10b ENSDARG00000073891 116 1.776 - - - 0.863 0.913 - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
6. slc16a6a ENSDARG00000102793 60 1.744 0.908 - - 0.836 - - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
7. si:ch211-117n7.8 si:ch211-117n7.8 83 1.744 0.856 - - - - - - 0.888 -
8. adar ENSDARG00000012389 520 1.743 0.850 - - - - - - 0.893 - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
9. polr3c ENSDARG00000057562 123 1.722 - - - 0.811 - - - 0.911 - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
10. ids ENSDARG00000071699 265 1.712 - 0.874 - - - - - 0.838 - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
11. hepacam 73 1.707 - - - - - 0.891 0.816 - - hepatic and glial cell adhesion molecule, transcript variant X2
12. OVOL1 75 1.7 0.897 0.803 - - - - - - - ovo-like zinc finger 1, transcript variant X1
13. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 1.696 0.844 - - - - - - 0.852 - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
14. zgc:114037_3 17 1.689 0.897 - - - 0.792 - - - - zgc:114037
15. CCDC30 ENSDARG00000056961 178 1.689 0.881 - - - - - - 0.808 - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
16. fut9d ENSDARG00000028098 427 1.68 - 0.803 - - - - - 0.877 - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
17. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1.669 - 0.767 - - - - - 0.902 - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
18. fbxo32 ENSDARG00000040277 93 1.668 0.948 0.720 - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
19. b3gnt3.3 ENSDARG00000093521 430 1.664 - 0.858 - - - - - 0.806 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
20. CABZ01063556.1 ENSDARG00000116344 319 1.661 - - - - - 0.754 - 0.907 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
21. syne2a 63 1.66 0.853 - - - 0.807 - - - - spectrin repeat containing, nuclear envelope 2a
22. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.66 - - - - - - 0.743 0.917 - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
23. dnaaf1 ENSDARG00000012030 58 1.65 - - - 0.866 0.784 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
24. morn2 ENSDARG00000071360 44 1.648 0.889 - - - 0.759 - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
25. acsl3a ENSDARG00000032079 897 1.641 - 0.784 - - - 0.857 - - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
26. eif3eb ENSDARG00000002549, ENSDARG00000113466 223 1.641 - - - 0.752 - - - 0.889 - eukaryotic translation initiation factor 3, subunit E, b [Source:ZFIN;Acc:ZDB-GENE-050208-283]
27. rem2 ENSDARG00000074064, ENSDARG00000109687 219 1.639 - - 0.810 - - - - 0.829 - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
28. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.631 - - - 0.825 - 0.806 - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
29. ncaldb ENSDARG00000011334 123 1.63 - 0.792 - - - - - 0.838 - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
30. RFESD_1 RFESD_1 65 1.622 - - - - - - 0.734 0.888 -
31. BX890577.2 BX890577.2 94 1.62 - - - 0.851 0.769 - - - -
32. tspan11 ENSDARG00000001781 743 1.606 - 0.791 - - - - - 0.815 - tetraspanin 11 [Source:ZFIN;Acc:ZDB-GENE-041210-93]
33. chd5 ENSDARG00000105083 132 1.603 - - - - 0.787 - 0.816 - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
34. cyp26a1 ENSDARG00000033999 1136 1.602 - - - 0.861 - - - 0.741 - cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
35. ZNF784_1 ZNF784_1 155 1.6 - 0.803 - - - 0.797 - - -
36. si:rp71-80o10.4 ENSDARG00000094316 279 1.6 0.885 0.715 - - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
37. osbpl10 osbpl10 836 1.599 - - - - - 0.880 - 0.719 -
38. ppp1r3da ENSDARG00000077513 109 1.599 - - 0.755 - - - - 0.844 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
39. illr4 ENSDARG00000008075 164 1.597 - 0.767 - 0.830 - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
40. nr1i2 ENSDARG00000029766 458 1.593 0.807 0.786 - - - - - - - nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]
41. lrch4 ENSDARG00000068258 24 1.592 - 0.798 - - 0.794 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
42. pigp ENSDARG00000038805 611 1.588 - - - 0.724 - - - 0.864 - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
43. stambpb ENSDARG00000086906 265 1.587 - 0.830 - - - 0.757 - - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
44. crabp2b ENSDARG00000030449 3091 1.585 - - - 0.821 0.764 - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
45. serpinb1l2 ENSDARG00000070396 37 1.577 - - - 0.855 0.722 - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
46. fam151a ENSDARG00000058218 40 1.572 - 0.791 - - - 0.781 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
47. CCDC64B CCDC64B 337 1.57 0.840 - - - - - - 0.730 -
48. gdf6b ENSDARG00000005510 106 1.569 - - - 0.868 0.701 - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
49. plekha3 ENSDARG00000056601 213 1.568 0.832 - - 0.736 - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
50. drd4a ENSDARG00000038363 82 1.566 - - - 0.799 - 0.767 - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
51. elovl2 ENSDARG00000045414 119 1.565 - - - 0.749 - - 0.816 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
52. TMEM246 ENSDARG00000061553 168 1.561 - 0.781 - 0.780 - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
53. pappa2 ENSDARG00000076020 89 1.557 - - - 0.827 0.730 - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
54. CABZ01070852.2 ENSDARG00000114999 16 1.556 - 0.789 - - - - 0.767 - -
55. zgc:175008 zgc:175008 55 1.555 - 0.798 0.757 - - - - - -
56. tbx6 ENSDARG00000011785 132 1.552 - - 0.736 - - - 0.816 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
57. foxj1a ENSDARG00000101919 1095 1.552 - - - 0.798 0.754 - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
58. C5H9orf117 C5H9orf117 88 1.552 - 0.734 - 0.818 - - - - -
59. pcdh8 ENSDARG00000006467 317 1.551 - - - 0.793 0.758 - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
60. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 1.549 0.847 - - - - - - - 0.702 methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
61. ulk4 ENSDARG00000004176 85 1.548 - 0.791 - - 0.757 - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
62. spred2b ENSDARG00000008372 405 1.546 0.746 - - 0.800 - - - - - sprouty-related, EVH1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2342]
63. im:7140055 ENSDARG00000092181 450 1.545 0.754 0.791 - - - - - - - im:7140055 [Source:ZFIN;Acc:ZDB-GENE-041111-101]
64. TEKT4 ENSDARG00000028899 47 1.545 - - 0.750 - 0.795 - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
65. pou5f3 ENSDARG00000044774 212 1.544 - - - 0.724 0.820 - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
66. lsm1 ENSDARG00000043177 767 1.539 0.769 - - - - 0.770 - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
67. dab2ipa ENSDARG00000069484 1138 1.537 - 0.824 - - - 0.713 - - - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
68. cadm1b ENSDARG00000042677 277 1.529 - 0.798 - - 0.731 - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
69. si:ch211-188c16.1 ENSDARG00000077288 16 1.525 - - 0.760 - 0.765 - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
70. tgm1l4 ENSDARG00000101407 800 1.525 0.750 - - - - - - 0.775 - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
71. LRIF1 LRIF1 135 1.521 - 0.702 - - - - - 0.819 -
72. ccdc22 ENSDARG00000052379 2276 1.519 0.800 - - - - 0.719 - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
73. skap2 ENSDARG00000000906 146 1.519 - 0.768 - 0.751 - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
74. gnb1b ENSDARG00000104372 1077 1.518 0.717 0.801 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
75. fyco1a ENSDARG00000104500 652 1.517 - 0.789 - - 0.728 - - - - FYVE and coiled-coil domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-110411-276]
76. phf8 ENSDARG00000006584 476 1.514 0.701 - - 0.813 - - - - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
77. dhcr24 ENSDARG00000013236 61 1.506 - - - 0.798 - 0.708 - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
78. tnfrsf1b ENSDARG00000070165 467 1.495 - 0.701 - 0.794 - - - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
79. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.489 - - 0.722 0.767 - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
80. si:dkey-17e16.18 47 1.475 - - 0.752 0.723 - - - - - si:dkey-17e16.18
81. si:ch73-367f21.6 ENSDARG00000089953 46 1.473 - - - - - 0.713 0.760 - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
82. si:dkey-150k17.3 33 1.467 - 0.754 - - - 0.713 - - - si:dkey-150k17.3
83. EPS8L1 891 1.465 0.741 - - - 0.724 - - - - eps8-like1, transcript variant X3
84. BX469922.1 BX469922.1 133 1.454 - - 0.743 0.711 - - - - -
85. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.446 - - - - - - - 0.740 0.706 general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
86. si:dkey-225f23.4 ENSDARG00000102520 86 1.437 - 0.726 0.711 - - - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
87. CDCA2 CDCA2 930 1.435 - - - - - 0.712 - 0.723 -
88. ccdc11 ccdc11 79 1.422 - - - 0.722 0.700 - - - -
89. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.416 - - - - 0.708 - - - 0.708 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
90. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.415 - 0.707 - - - 0.708 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
91. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 0.953 0.953 - - - - - - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
92. myf5 ENSDARG00000007277 1051 0.942 - - - - 0.942 - - - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
93. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 0.932 - - - - - - - 0.932 - syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
94. si:dkey-52l6.2 si:dkey-52l6.2 384 0.928 - - - - - - - 0.928 -
95. CT573389.1 CT573389.1 26 0.928 0.928 - - - - - - - -
96. kcnk13a ENSDARG00000008212 136 0.928 0.928 - - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
97. si:dkey-242h9.3 ENSDARG00000069189 83 0.928 0.928 - - - - - - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
98. BX470189.1 ENSDARG00000067658 399 0.926 0.926 - - - - - - - - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
99. CR376785.2 CR376785.2 175 0.925 - - - - - - - 0.925 -
100. si:dkey-7l6.3 ENSDARG00000094514 146 0.925 - - - 0.925 - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]

There are 1508 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA