Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ripk4

Gene Name Gene ID Reads Annotation
ripk4 ENSDARG00000043211 775 receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]










Genes with expression patterns similar to ripk4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ripk4 ENSDARG00000043211 775 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
2. prkra ENSDARG00000076718 606 2.991 - - - 0.721 - 0.730 - 0.700 0.840 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
3. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 2.346 - - - 0.897 - - 0.705 0.744 - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
4. rfc5 ENSDARG00000035634 974 1.825 - - - - 0.992 - - 0.833 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
5. tmem167a ENSDARG00000035914 3319 1.791 - - - - - - - 0.843 0.948 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
6. SLC35A2 ENSDARG00000058990 289 1.786 - - - - - - - 0.941 0.845 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
7. E2F6 E2F6 1271 1.779 - - - - 0.965 - - - 0.814
8. hmgcs1 ENSDARG00000103025 231 1.769 - - - - - - 0.850 0.919 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
9. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.745 - 0.782 - - - - - - 0.963 zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
10. MAF1 ENSDARG00000013122 6899 1.737 - - - - 0.951 - - 0.786 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
11. dctd ENSDARG00000036990 2168 1.729 - - - - - - - 0.909 0.820 dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
12. WDR61 ENSDARG00000007755 2827 1.718 - - - 0.743 0.975 - - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
13. tex15 ENSDARG00000098929 60 1.712 - - - 0.785 - - 0.927 - - testis expressed 15 [Source:ZFIN;Acc:ZDB-GENE-091204-395]
14. FBXO33 ENSDARG00000075400 1164 1.711 - - - - - - - 0.898 0.813 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
15. hbegfa ENSDARG00000075121 1865 1.703 - - - 0.748 - - - - 0.955 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
16. si:ch211-67e16.2 41 1.703 - - - - - - 0.740 0.963 - si:ch211-67e16.2, transcript variant X2
17. CACUL1 ENSDARG00000021885 691 1.693 - - - 0.856 - - - - 0.837 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
18. rbm27 ENSDARG00000060521 185 1.677 - 0.726 - - - - - 0.951 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
19. CABZ01039859.1 ENSDARG00000076361 540 1.672 - - - - - - 0.760 0.912 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
20. clasp1a ENSDARG00000010280 1158 1.67 - - - 0.717 - - - 0.953 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
21. ppp4r2b ENSDARG00000053447 2506 1.668 - - - - 0.955 - - - 0.713 protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
22. stk10 ENSDARG00000101894 1587 1.662 - - - - - - 0.849 - 0.813 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
23. scaf4b ENSDARG00000018854 734 1.652 - 0.705 - - - - - 0.947 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
24. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.643 - - - 0.796 - - - 0.847 - dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
25. CT583728.14 ENSDARG00000112295 911 1.64 - - - - - - 0.732 0.908 -
26. ttpal ENSDARG00000070644, ENSDARG00000112925 471 1.624 - - - - - - 0.766 0.858 - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
27. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.612 0.862 - - 0.750 - - - - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
28. ints10 ENSDARG00000043031 455 1.612 - - - - - 0.765 - - 0.847 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
29. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.601 - - - 0.760 - - - - 0.841 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
30. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.573 - - - - - - 0.725 - 0.848
31. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.571 - - - - - - - 0.756 0.815 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
32. si:dkey-162h11.2 si:dkey-162h11.2 257 1.564 - - - - - - 0.799 0.765 -
33. mmp9 ENSDARG00000042816 298 1.561 - 0.719 - - - - - - 0.842 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
34. wrap53 ENSDARG00000086150 975 1.555 - 0.707 - - - - - 0.848 - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
35. chfr ENSDARG00000075347 664 1.55 - - - 0.808 - - 0.742 - - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
36. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.546 - 0.728 - 0.818 - - - - - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
37. DCUN1D3 ENSDARG00000011493 319 1.545 - - - - - - 0.834 0.711 - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
38. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.545 - - - 0.738 - - - - 0.807 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
39. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.537 - - - - 0.755 - - - 0.782 claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
40. gna13b ENSDARG00000037924 1963 1.535 - - - - - - 0.748 - 0.787 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
41. ube3b ENSDARG00000061960 978 1.534 - 0.731 - - - - - - 0.803 ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
42. PMF1 PMF1 1172 1.531 0.753 0.778 - - - - - - -
43. mgat5 ENSDARG00000071506 324 1.523 - 0.707 - - - - 0.816 - - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
44. CABZ01112210.1 CABZ01112210.1 48 1.504 - - 0.711 - - - 0.793 - -
45. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.477 - - - 0.748 - - - - 0.729 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
46. b3gnt2b ENSDARG00000091902 4125 1.461 - - - - - - - 0.719 0.742 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
47. adamts15a ENSDARG00000029124, ENSDARG00000111736 68 1.461 0.729 - - - - 0.732 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 15a [Source:ZFIN;Acc:ZDB-GENE-060526-203]
48. MYO5A MYO5A 595 1.452 - 0.719 - 0.733 - - - - -
49. flcn ENSDARG00000062385, ENSDARG00000116055 614 1.438 - 0.728 - - - - 0.710 - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
50. dph1 ENSDARG00000057973 191 1.437 - - - 0.730 - 0.707 - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
51. si:dkey-114e9.1 si:dkey-114e9.1 233 0.998 - - - - 0.998 - - - -
52. vldlr ENSDARG00000006257 772 0.998 - - - - 0.998 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
53. CABZ01073954.1 CABZ01073954.1 258 0.998 - - - - 0.998 - - - -
54. C3H16orf89 C3H16orf89 449 0.997 - - - - 0.997 - - - -
55. tmem234 ENSDARG00000078333 488 0.997 - - - - 0.997 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
56. errfi1 errfi1 979 0.997 - - - - 0.997 - - - -
57. sema3fa ENSDARG00000011163 759 0.997 - - - - 0.997 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
58. si:dkey-70e17.2 si:dkey-70e17.2 371 0.997 - - - - 0.997 - - - -
59. pbx1a ENSDARG00000100494 854 0.997 - - - - 0.997 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
60. si:dkey-30k6.5 ENSDARG00000057238 617 0.997 - - - - 0.997 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
61. kcnq5a ENSDARG00000069954 492 0.997 - - - - 0.997 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
62. slc46a1 ENSDARG00000026149 297 0.997 - - - - 0.997 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
63. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.997 - - - - 0.997 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
64. bin2b ENSDARG00000010255 2649 0.997 - - - - 0.997 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
65. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.996 - - - - 0.996 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
66. nrg2a ENSDARG00000077818 854 0.996 - - - - 0.996 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
67. trim24 ENSDARG00000103350 431 0.996 - - - - 0.996 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
68. slc48a1b ENSDARG00000026109 1427 0.996 - - - - 0.996 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
69. epc1 epc1 1164 0.996 - - - - 0.996 - - - -
70. gabpb2a ENSDARG00000007943 1570 0.995 - - - - 0.995 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
71. klf11a ENSDARG00000030844 3972 0.995 - - - - 0.995 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
72. RNF111 ENSDARG00000078802 1357 0.995 - - - - 0.995 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
73. slc4a2b ENSDARG00000052330 1900 0.995 - - - - 0.995 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
74. tpt1 ENSDARG00000092693 1110 0.995 - - - - 0.995 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
75. inpp4aa ENSDARG00000063352 1297 0.994 - - - - 0.994 - - - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
76. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.994 - - - - 0.994 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
77. wdr43 ENSDARG00000077264 1992 0.994 - - - - 0.994 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
78. slc9a3r1 slc9a3r1 743 0.994 - - - - 0.994 - - - -
79. acvr2aa ENSDARG00000011188 1454 0.994 - - - - 0.994 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
80. ERO1LB ERO1LB 1433 0.994 - - - - 0.994 - - - -
81. RNF214 RNF214 816 0.994 - - - - 0.994 - - - -
82. ttc27 ENSDARG00000007918 1228 0.994 - - - - 0.994 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
83. zdhhc9 ENSDARG00000060515 981 0.993 - - - - 0.993 - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
84. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.993 - - - - 0.993 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
85. itga5 ENSDARG00000006353 1876 0.993 - - - - 0.993 - - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
86. foxa2 ENSDARG00000003411 2309 0.992 - - - - 0.992 - - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
87. ARID3A ENSDARG00000070843 1613 0.992 - - - - 0.992 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
88. smim7 ENSDARG00000074848 1260 0.992 - - - - 0.992 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
89. iars2 ENSDARG00000044134 1990 0.992 - - - - 0.992 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
90. ppip5k2 ENSDARG00000078441 1074 0.992 - - - - 0.992 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
91. CABZ01072607.1 ENSDARG00000113761 784 0.992 - - - - 0.992 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
92. commd4 ENSDARG00000061946 3281 0.992 - - - - 0.992 - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
93. VPS37B_1 VPS37B_1 1816 0.991 - - - - 0.991 - - - -
94. ctdspla ENSDARG00000071673 1447 0.991 - - - - 0.991 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
95. CR361563.1 CR361563.1 1355 0.991 - - - - 0.991 - - - -
96. MARK3 MARK3 1767 0.991 - - - - 0.991 - - - -
97. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.991 - - - - 0.991 - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
98. pim3 ENSDARG00000055129 1517 0.99 - - - - 0.990 - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
99. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 0.99 - - - - 0.990 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
100. DENND4B ENSDARG00000102914 1001 0.99 - - - - 0.990 - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA