Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for riok3

Gene Name Gene ID Reads Annotation
riok3 ENSDARG00000042751 3163 RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]










Genes with expression patterns similar to riok3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. riok3 ENSDARG00000042751 3163 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
2. cox7c ENSDARG00000104537 12169 2.521 0.723 0.988 - - - - 0.810 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
3. me3 ENSDARG00000002305 3305 2.461 - 0.999 - - - - 0.746 0.716 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
4. psmb4 ENSDARG00000054696 8100 1.778 0.780 0.998 - - - - - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
5. CHCHD3 CHCHD3 1425 1.766 - 0.998 - - - 0.768 - - -
6. ube2d3 ENSDARG00000038473 4096 1.754 - 0.980 - - - - 0.774 - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
7. RABGAP1 ENSDARG00000098967 933 1.735 - 0.996 - - - 0.739 - - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
8. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.719 0.721 0.998 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
9. dub ENSDARG00000059774 1026 1.717 - 0.998 - - - - 0.719 - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
10. med10 ENSDARG00000070623 5134 1.704 - 0.999 - - - 0.705 - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
11. cnbpb ENSDARG00000070922 14606 1.699 - 0.968 - - - - 0.731 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
12. kpna5 ENSDARG00000042030 1643 1.608 - - - - - 0.742 0.866 - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
13. hibadhb ENSDARG00000007959 4858 1.596 - 0.879 - - - - 0.717 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
14. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.584 - 0.879 - - - 0.705 - - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
15. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 1.583 - 0.773 - - - - 0.810 - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
16. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 1.576 - - - - - - 0.843 0.733 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
17. timm13 ENSDARG00000058297 4447 1.563 0.757 - - - - 0.806 - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
18. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.558 0.760 - - - - - 0.798 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
19. mrp63 mrp63 2500 1.556 - - - - - 0.714 0.842 - -
20. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.549 - - - - - 0.754 0.795 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
21. rps27.1 ENSDARG00000023298 86382 1.538 0.707 0.831 - - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
22. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.514 0.709 - - - - - 0.805 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
23. aimp1 ENSDARG00000060036 5343 1.505 0.771 - - - - - 0.734 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
24. timm10 ENSDARG00000069116 4459 1.5 - - - - - 0.714 0.786 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
25. mrps9 ENSDARG00000061505 1636 1.499 0.763 - - - - - 0.736 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
26. rplp0 ENSDARG00000051783 88740 1.498 0.733 0.765 - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
27. zfand3 ENSDARG00000052833 2682 1.494 - - - - - 0.782 0.712 - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
28. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.492 0.783 - - - - - 0.709 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
29. sdha ENSDARG00000016721 8255 1.465 0.735 - - - - - 0.730 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
30. mical3a ENSDARG00000021979, ENSDARG00000097017 1790 1.464 0.762 - - - - - - 0.702 - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
31. cox6a1 ENSDARG00000022438 18811 1.463 0.732 - - - - - 0.731 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
32. ccdc94 1417 1.459 - - - - - - 0.723 0.736 - coiled-coil domain containing 94
33. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.455 0.752 - - - - - 0.703 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
34. nars ENSDARG00000061100 2948 1.454 - - - - - 0.718 0.736 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
35. ssbp1 ENSDARG00000039350 809 1.446 0.717 - - - - - 0.729 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
36. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.445 0.708 - - - - 0.737 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
37. rpl7l1 ENSDARG00000042864 3256 1.435 0.710 - - - - - - 0.725 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
38. nnt ENSDARG00000023536 7357 1.435 - - - - - 0.704 0.731 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
39. trim47 ENSDARG00000056678 641 1.433 - - - - - - 0.703 0.730 - tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]
40. BCKDHB ENSDARG00000014676 3725 1.432 0.709 - - - - - 0.723 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
41. pelo ENSDARG00000055477 1927 1.431 - - - - - - 0.711 0.720 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
42. rnf121 ENSDARG00000060282 1809 1.43 - - - - - 0.711 - 0.719 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
43. pip5k2 pip5k2 5743 1.428 - - - - - 0.719 - 0.709 -
44. calcrla ENSDARG00000011473 1324 1.423 - - - - - - 0.708 0.715 - calcitonin receptor-like a [Source:ZFIN;Acc:ZDB-GENE-040822-26]
45. psmb2 ENSDARG00000031511 4016 1.416 - - - - - 0.716 0.700 - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
46. surf6 ENSDARG00000035427 1695 0.999 - 0.999 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
47. nanos1 ENSDARG00000109337 2494 0.998 - 0.998 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
48. murca murca 6614 0.998 - 0.998 - - - - - - -
49. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 0.998 - 0.998 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
50. MED17 ENSDARG00000006345 779 0.998 - 0.998 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
51. cnot6 cnot6 7029 0.998 - 0.998 - - - - - - -
52. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.998 - 0.998 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
53. ndufa7 ENSDARG00000036684 6051 0.998 - 0.998 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
54. eif4a3 ENSDARG00000102978 16162 0.998 - 0.998 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
55. hnrnph1l ENSDARG00000005551 8727 0.998 - 0.998 - - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
56. ercc6l ENSDARG00000002479 1535 0.998 - 0.998 - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
57. NUAK1_1 NUAK1_1 1782 0.998 - 0.998 - - - - - - -
58. gulp1a ENSDARG00000001733 1206 0.998 - 0.998 - - - - - - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
59. cpe ENSDARG00000055874, ENSDARG00000116033 2981 0.998 - 0.998 - - - - - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
60. SERP1 ENSDARG00000076223 2528 0.998 - 0.998 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
61. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.998 - 0.998 - - - - - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
62. creg1 ENSDARG00000105154 843 0.998 - 0.998 - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
63. mbnl2 ENSDARG00000018460 3328 0.998 - 0.998 - - - - - - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
64. rad21a_1 ENSDARG00000006092 4482 0.998 - 0.998 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
65. rasef ENSDARG00000076250 1359 0.998 - 0.998 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
66. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.998 - 0.998 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
67. acvr2ab ENSDARG00000104700 1569 0.998 - 0.998 - - - - - - - activin A receptor type 2Ab [Source:ZFIN;Acc:ZDB-GENE-120215-23]
68. stag1b ENSDARG00000062137 1814 0.998 - 0.998 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
69. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.998 - 0.998 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
70. TMEM200B TMEM200B 554 0.998 - 0.998 - - - - - - -
71. si:dkey-197c15.6 ENSDARG00000079401 745 0.998 - 0.998 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
72. decr1 ENSDARG00000003869 1344 0.998 - 0.998 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
73. dact1 ENSDARG00000101635 1303 0.998 - 0.998 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
74. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.998 - 0.998 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
75. nit2 ENSDARG00000017590 1393 0.998 - 0.998 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
76. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.998 - 0.998 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
77. MRPL42 ENSDARG00000079391 1403 0.998 - 0.998 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
78. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.998 - 0.998 - - - - - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
79. fbl ENSDARG00000053912 5891 0.998 - 0.998 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
80. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.998 - 0.998 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
81. hccsa hccsa 869 0.998 - 0.998 - - - - - - -
82. lims2 ENSDARG00000014976 1248 0.998 - 0.998 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
83. STMN3 ENSDARG00000038465 1009 0.997 - 0.997 - - - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
84. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 0.997 - 0.997 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
85. plscr3b ENSDARG00000069432 8500 0.997 - 0.997 - - - - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
86. dpp4 ENSDARG00000079420 1286 0.997 - 0.997 - - - - - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
87. PHLPP1 ENSDARG00000078694 2466 0.997 - 0.997 - - - - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
88. atp1b3b ENSDARG00000042837 5163 0.997 - 0.997 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
89. nup133 ENSDARG00000010078 2373 0.997 - 0.997 - - - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
90. CABZ01081490.1 ENSDARG00000111653 11892 0.997 - 0.997 - - - - - - -
91. dyrk1b ENSDARG00000070187 2777 0.997 - 0.997 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
92. rmi1 ENSDARG00000041376 674 0.997 - 0.997 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
93. FAM3D ENSDARG00000091625 1392 0.997 - 0.997 - - - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
94. psmd13 ENSDARG00000016239 4229 0.996 - 0.996 - - - - - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
95. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.995 - 0.995 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
96. txndc17 ENSDARG00000058079 3533 0.995 - 0.995 - - - - - - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
97. nfe2l3 ENSDARG00000019810 3682 0.995 - 0.995 - - - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
98. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.993 - 0.993 - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
99. acsf2 ENSDARG00000061201 4413 0.99 - 0.990 - - - - - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
100. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.987 - 0.987 - - - - - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]

There are 782 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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