Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rims2a

Gene Name Gene ID Reads Annotation
rims2a ENSDARG00000101606 1088 regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]










Genes with expression patterns similar to rims2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims2a ENSDARG00000101606 1088 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
2. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.618 0.981 - - 0.878 - - 0.759 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
3. adam23a ENSDARG00000062323 580 2.555 - 0.814 - 0.941 - - 0.800 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
4. gbx1 ENSDARG00000071418 871 2.539 0.989 0.811 - - - - 0.739 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
5. elavl3 ENSDARG00000014420 8644 2.508 0.936 - - 0.713 - - 0.859 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
6. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.375 - 0.760 - 0.825 - - 0.790 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
7. scrt2 ENSDARG00000056175 4331 2.28 - 0.819 - - - - 0.739 0.722 - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
8. UBE2QL1 ENSDARG00000079276 3474 2.211 - - - 0.738 - - 0.758 0.715 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
9. CREM CREM 1333 1.916 0.981 - - 0.935 - - - - -
10. eef1a1a ENSDARG00000039502 234 1.9 - 0.921 - 0.979 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
11. slc3a1 ENSDARG00000017165 136 1.864 - 0.887 - 0.977 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
12. syt3 ENSDARG00000075830 430 1.844 - - - 0.962 - - 0.882 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
13. itm2ca ENSDARG00000043448 1265 1.833 0.989 - - - - - 0.844 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
14. apip ENSDARG00000003132 1212 1.823 0.989 - - 0.834 - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
15. nr2f1b ENSDARG00000017168 1487 1.798 0.989 - - 0.809 - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
16. AL935029.1 AL935029.1 514 1.779 0.989 - - - - - 0.790 - -
17. atg4b ENSDARG00000052104 758 1.765 0.991 - - 0.774 - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
18. nova1 ENSDARG00000020178 4129 1.754 0.972 - - - - - 0.782 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
19. atp6ap1a ENSDARG00000041417 898 1.752 - - - 0.899 - - - 0.853 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
20. CABZ01051991.1 CABZ01051991.1 346 1.727 - - - 0.966 - - 0.761 - -
21. st18 663 1.727 - - - 0.938 - - 0.789 - - suppression of tumorigenicity 18, zinc finger
22. syngr3a ENSDARG00000014871 405 1.726 - - - 0.977 - - 0.749 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
23. gng3 ENSDARG00000009553 2530 1.718 - 0.879 - - - - 0.839 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
24. rexo1 ENSDARG00000026986 770 1.716 - - - 0.979 - - 0.737 - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
25. LRRN3 LRRN3 261 1.715 - 0.884 - - - - 0.831 - -
26. CLIP3 ENSDARG00000054456 734 1.711 - - - 0.921 - - 0.790 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
27. ndrg4 ENSDARG00000103937 1234 1.705 - - - 0.862 - - 0.843 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
28. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.702 - - - 0.914 - - - 0.788 - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
29. stx1b ENSDARG00000000503 2724 1.7 - 0.886 - - - - 0.814 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
30. pcsk1nl ENSDARG00000076170 1232 1.697 - 0.849 - - - - 0.848 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
31. stxbp1a ENSDARG00000001994 5154 1.697 0.827 - - - - - 0.870 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
32. fam49a ENSDARG00000006672 939 1.692 - - - 0.976 - - 0.716 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
33. cbln1 ENSDARG00000057296 165 1.689 - 0.866 - - - - 0.823 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
34. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.689 - 0.861 - - - - 0.828 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
35. LANCL2 ENSDARG00000045465 1221 1.688 - - - 0.900 - - 0.788 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
36. mb21d2a mb21d2a 421 1.687 - - - 0.951 - - 0.736 - -
37. ftr65 202 1.686 - 0.707 - 0.979 - - - - - finTRIM family, member 65
38. carm1 ENSDARG00000018698 5599 1.671 0.958 - - - - 0.713 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
39. syt11a ENSDARG00000057913 1145 1.668 - 0.846 - - - - 0.822 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
40. MAP6 MAP6 643 1.666 - 0.830 - - - - 0.836 - -
41. fam3c ENSDARG00000056152 3833 1.665 0.884 - - 0.781 - - - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
42. fam172a ENSDARG00000052697 422 1.664 - - - 0.934 - - - 0.730 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
43. nrxn3b ENSDARG00000062693 192 1.662 - 0.866 - - - - 0.796 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
44. nkx1.2lb ENSDARG00000099427 220 1.661 - 0.921 - - - - 0.740 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
45. GLRA3 ENSDARG00000011066 242 1.66 - - - - - 0.839 0.821 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
46. prdm8 ENSDARG00000025017 370 1.659 - 0.879 - - - - 0.780 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
47. sgcb ENSDARG00000052341 4168 1.659 0.952 0.707 - - - - - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
48. C19H7orf41 C19H7orf41 2243 1.655 - - - 0.876 - - 0.779 - -
49. neflb ENSDARG00000012426 298 1.654 - 0.812 - - - - 0.842 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
50. hoxc8a ENSDARG00000070346 4252 1.653 0.932 - - - - - 0.721 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
51. tmem179 ENSDARG00000013292 343 1.652 - 0.853 - - - - 0.799 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
52. si:ch211-138k19.2 si:ch211-138k19.2 398 1.651 - 0.812 - - - - 0.839 - -
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.65 - - - 0.915 - - 0.735 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. rprd2b ENSDARG00000074676 809 1.649 - - - 0.931 - - - 0.718 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
55. RBM26 ENSDARG00000104130 1012 1.648 - - - 0.909 - - - 0.739 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
56. slc18a3a ENSDARG00000006356 1285 1.643 - 0.809 - - - - 0.834 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
57. nadl1.1 1200 1.642 - 0.804 - - - - 0.838 - - neural adhesion molecule L1.1, transcript variant X1
58. espn ENSDARG00000076414 343 1.642 - 0.888 - - - - 0.754 - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
59. scn2b ENSDARG00000101713 796 1.641 - 0.811 - - - - 0.830 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
60. nrxn2a ENSDARG00000061454 291 1.627 - 0.921 - - - - 0.706 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
61. trim46b ENSDARG00000058649 54 1.626 - 0.812 - - - - 0.814 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
62. golga7ba ENSDARG00000036295 1460 1.625 - - - 0.761 - - 0.864 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
63. unc119b ENSDARG00000044362 1528 1.625 - - - 0.891 - - 0.734 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
64. sez6l2 ENSDARG00000076052 360 1.625 - 0.722 - - - - 0.903 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
65. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.624 - 0.812 - - - - 0.812 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
66. ctps1a ENSDARG00000030700 3868 1.621 0.898 - - - - - - 0.723 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
67. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.616 - 0.830 - - - - 0.786 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
68. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.614 - 0.812 - - - - 0.802 - -
69. FUT9 FUT9 91 1.612 - 0.812 - - - - 0.800 - -
70. sp8b ENSDARG00000056666 3988 1.61 - - - - - 0.724 0.886 - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
71. fam131bb ENSDARG00000070575 1054 1.61 - - - - - - 0.787 0.823 - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
72. rybpa ENSDARG00000037773 904 1.609 - - - 0.897 - 0.712 - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
73. dclk1a ENSDARG00000018856 177 1.609 - - - - - - 0.879 0.730 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
74. scn8aa ENSDARG00000005775 792 1.607 - 0.866 - - - - 0.741 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
75. SV2B SV2B 208 1.606 - 0.811 - - - - 0.795 - -
76. CHL1 CHL1 1553 1.605 - 0.819 - - - - 0.786 - -
77. lppr3a lppr3a 1294 1.605 - - - 0.852 - - 0.753 - -
78. SNAP91 ENSDARG00000098809 556 1.603 - 0.773 - - - - 0.830 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
79. SV2A ENSDARG00000059945 1278 1.602 - - - 0.798 - - 0.804 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
80. SYT2 ENSDARG00000014169 265 1.601 - 0.852 - - - - 0.749 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
81. kcnc3a ENSDARG00000055855 1821 1.6 - 0.781 - - - - 0.819 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
82. gpr98 gpr98 717 1.599 - - - 0.835 - - 0.764 - -
83. ksr2 ENSDARG00000094526 134 1.597 - 0.863 - - - - 0.734 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
84. sv2bb ENSDARG00000060711 196 1.594 - 0.767 - - - - 0.827 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
85. id4 ENSDARG00000045131 2916 1.592 - - - - - 0.713 0.879 - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
86. CABZ01080599.2 CABZ01080599.2 192 1.59 - - - - - - 0.844 0.746 -
87. rbb4 rbb4 15541 1.59 0.863 - - - - 0.727 - - -
88. fam219ab ENSDARG00000013813 591 1.586 - 0.812 - - - - 0.774 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
89. jph3 ENSDARG00000102204 175 1.586 - 0.812 - - - - 0.774 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
90. SHC3 ENSDARG00000098909 332 1.585 - - - 0.831 - - 0.754 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
91. amph ENSDARG00000007663 599 1.585 - 0.811 - - - - 0.774 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
92. cacng3b ENSDARG00000076401 91 1.584 - 0.812 - - - - 0.772 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
93. cnrip1a ENSDARG00000091683 1491 1.581 - 0.760 - - - - 0.821 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
94. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.575 - 0.761 - - - - 0.814 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
95. cacng2b ENSDARG00000102376 213 1.575 - 0.861 - - - - 0.714 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
96. calca ENSDARG00000056590 150 1.572 - 0.737 - - - - 0.835 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
97. gipc1 ENSDARG00000104483 2913 1.568 - - - 0.850 - - 0.718 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
98. rprd2a ENSDARG00000058089 743 1.566 - - - 0.768 - - - 0.798 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
99. C8H1orf106 C8H1orf106 2690 1.566 - - - 0.837 - - 0.729 - -
100. tmeff1b ENSDARG00000056740 11253 1.566 - - - 0.738 - - 0.828 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]

There are 1902 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA