Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rims1a

Gene Name Gene ID Reads Annotation
rims1a ENSDARG00000074680 143 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]










Genes with expression patterns similar to rims1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims1a ENSDARG00000074680 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
2. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.954 - 1.000 - - - 0.954 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
3. BX470131.1 BX470131.1 86 1.934 - 1.000 - - - 0.934 - - -
4. st6gal1 ENSDARG00000044514 142 1.933 - 1.000 - - - 0.933 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
5. tmem178 ENSDARG00000020758 77 1.931 - 1.000 - - - 0.931 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. si:dkey-100n10.2 101 1.929 - 1.000 - - - 0.929 - - - si:dkey-100n10.2
7. si:dkey-225k4.1 ENSDARG00000092045 47 1.911 0.911 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
8. entpd2b ENSDARG00000044795 7 1.9 - 1.000 - - - 0.900 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
9. TMEM57 TMEM57 260 1.894 - 1.000 - - - 0.894 - - -
10. olfm1a ENSDARG00000018270 107 1.88 - 1.000 - - - 0.880 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.879 - 1.000 - - - 0.879 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. pycr1 pycr1 1258 1.866 - 1.000 - - - 0.866 - - -
13. hsp70l_1 ENSDARG00000055723 72 1.859 - 1.000 - - - 0.859 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
14. GRIN2B GRIN2B 140 1.854 - 1.000 - - - 0.854 - - -
15. CABZ01079192.1 ENSDARG00000101629 23 1.849 - 1.000 - - - 0.849 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
16. scg2b ENSDARG00000038574 345 1.843 - 1.000 - - - 0.843 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
17. cyp27a7 ENSDARG00000033802 216 1.808 - 1.000 - - - 0.808 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
18. HELZ2_1 ENSDARG00000012600 53 1.807 - 1.000 - - - 0.807 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. lhx5 ENSDARG00000057936 785 1.786 - 1.000 - - - 0.786 - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
20. ROBO3_1 ROBO3_1 468 1.781 - 0.893 - - - 0.888 - - -
21. SNX19 SNX19 350 1.78 - - - - - 0.923 0.857 - -
22. LINGO2 LINGO2 300 1.779 - 0.880 - - - 0.899 - - -
23. fez1 ENSDARG00000023174 701 1.752 - 1.000 - - - 0.752 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.74 - 0.826 - - - 0.914 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. BX321870.1 ENSDARG00000098519 9 1.726 - 1.000 - - 0.726 - - - -
26. toporsa ENSDARG00000037260 149 1.717 0.878 - - - - 0.839 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
27. aatkb ENSDARG00000104442 392 1.711 - 1.000 - - - 0.711 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
29. CT955963.1 ENSDARG00000100370 23 1.671 - 0.794 - - - 0.877 - - -
30. CR339053.3 CR339053.3 244 1.669 0.904 - - - - 0.765 - - -
31. vhl ENSDARG00000070617 663 1.668 0.804 - - - - 0.864 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
32. dcdc2b ENSDARG00000053744 181 1.662 - - - - - 0.823 0.839 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
33. RNF39 RNF39 52 1.651 0.911 - - - 0.740 - - - -
34. ripk2 ENSDARG00000104290 71 1.628 - - - - - 0.820 0.808 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
35. CABZ01112521.1 CABZ01112521.1 83 1.627 0.762 0.865 - - - - - - -
36. mir34 176 1.623 0.850 - - - - 0.773 - - - microRNA 34
37. BX936443.2 BX936443.2 28 1.619 0.744 0.875 - - - - - - -
38. shisa7 shisa7 181 1.604 - 0.756 - - - 0.848 - - -
39. RAC1_2 RAC1_2 51 1.571 - - - - 0.731 0.840 - - -
40. CR759921.2 CR759921.2 583 1.55 - - - - - 0.717 0.833 - -
41. phf23b ENSDARG00000036305 1073 1.535 - 0.780 - - - 0.755 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.526 - 0.728 - - - 0.798 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. sfr1 ENSDARG00000021974 45 1.523 - - - - 0.775 - 0.748 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
44. relnl relnl 863 1.522 - 0.805 - - - 0.717 - - -
45. cacng8b ENSDARG00000070626 176 1.519 - 0.794 - - - 0.725 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
46. PLEKHM3 ENSDARG00000030633 496 1.514 - - - - - 0.808 0.706 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
47. apof ENSDARG00000090980 145 1.514 - - - - 0.720 0.794 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
48. irx5b ENSDARG00000074070 459 1.485 - 0.726 - - - 0.759 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
50. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
51. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
52. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
53. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
54. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
55. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
56. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
57. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
58. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
59. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
60. GLS2 GLS2 10 1 - 1.000 - - - - - - -
61. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
62. si:dkey-19a16.2 ENSDARG00000058794 8 1 - 1.000 - - - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
63. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
64. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
65. ODF2 ODF2 6 1 - 1.000 - - - - - - -
66. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
67. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
68. si:dkeyp-77c8.1 ENSDARG00000093940 0 1 - 1.000 - - - - - - - si:dkeyp-77c8.1 [Source:ZFIN;Acc:ZDB-GENE-090313-397]
69. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
70. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
71. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
72. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
73. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
74. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
75. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
76. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
77. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
78. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
79. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
80. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
81. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
82. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
83. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
84. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
85. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
86. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
87. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
88. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
89. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
90. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1 - 1.000 - - - - - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
91. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
92. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
93. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
94. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
95. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
96. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
97. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
98. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
99. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
100. tnxb 30 1 - 1.000 - - - - - - - tenascin XB

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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