Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rims1a

Gene Name Gene ID Reads Annotation
rims1a ENSDARG00000074680 143 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]










Genes with expression patterns similar to rims1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims1a ENSDARG00000074680 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
2. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.954 - 1.000 - - - 0.954 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
3. BX470131.1 BX470131.1 86 1.934 - 1.000 - - - 0.934 - - -
4. st6gal1 ENSDARG00000044514 142 1.933 - 1.000 - - - 0.933 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
5. tmem178 ENSDARG00000020758 77 1.931 - 1.000 - - - 0.931 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. si:dkey-100n10.2 101 1.929 - 1.000 - - - 0.929 - - - si:dkey-100n10.2
7. si:dkey-225k4.1 ENSDARG00000092045 47 1.911 0.911 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
8. entpd2b ENSDARG00000044795 7 1.9 - 1.000 - - - 0.900 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
9. TMEM57 TMEM57 260 1.894 - 1.000 - - - 0.894 - - -
10. olfm1a ENSDARG00000018270 107 1.88 - 1.000 - - - 0.880 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.879 - 1.000 - - - 0.879 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. pycr1 pycr1 1258 1.866 - 1.000 - - - 0.866 - - -
13. hsp70l_1 ENSDARG00000055723 72 1.859 - 1.000 - - - 0.859 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
14. GRIN2B GRIN2B 140 1.854 - 1.000 - - - 0.854 - - -
15. CABZ01079192.1 ENSDARG00000101629 23 1.849 - 1.000 - - - 0.849 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
16. scg2b ENSDARG00000038574 345 1.843 - 1.000 - - - 0.843 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
17. cyp27a7 ENSDARG00000033802 216 1.808 - 1.000 - - - 0.808 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
18. HELZ2_1 ENSDARG00000012600 53 1.807 - 1.000 - - - 0.807 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. lhx5 ENSDARG00000057936 785 1.786 - 1.000 - - - 0.786 - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
20. ROBO3_1 ROBO3_1 468 1.781 - 0.893 - - - 0.888 - - -
21. SNX19 SNX19 350 1.78 - - - - - 0.923 0.857 - -
22. LINGO2 LINGO2 300 1.779 - 0.880 - - - 0.899 - - -
23. fez1 ENSDARG00000023174 701 1.752 - 1.000 - - - 0.752 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.74 - 0.826 - - - 0.914 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. BX321870.1 ENSDARG00000098519 9 1.726 - 1.000 - - 0.726 - - - -
26. toporsa ENSDARG00000037260 149 1.717 0.878 - - - - 0.839 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
27. aatkb ENSDARG00000104442 392 1.711 - 1.000 - - - 0.711 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
29. CT955963.1 ENSDARG00000100370 23 1.671 - 0.794 - - - 0.877 - - -
30. CR339053.3 CR339053.3 244 1.669 0.904 - - - - 0.765 - - -
31. vhl ENSDARG00000070617 663 1.668 0.804 - - - - 0.864 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
32. dcdc2b ENSDARG00000053744 181 1.662 - - - - - 0.823 0.839 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
33. RNF39 RNF39 52 1.651 0.911 - - - 0.740 - - - -
34. ripk2 ENSDARG00000104290 71 1.628 - - - - - 0.820 0.808 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
35. CABZ01112521.1 CABZ01112521.1 83 1.627 0.762 0.865 - - - - - - -
36. mir34 176 1.623 0.850 - - - - 0.773 - - - microRNA 34
37. BX936443.2 BX936443.2 28 1.619 0.744 0.875 - - - - - - -
38. shisa7 shisa7 181 1.604 - 0.756 - - - 0.848 - - -
39. RAC1_2 RAC1_2 51 1.571 - - - - 0.731 0.840 - - -
40. CR759921.2 CR759921.2 583 1.55 - - - - - 0.717 0.833 - -
41. phf23b ENSDARG00000036305 1073 1.535 - 0.780 - - - 0.755 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.526 - 0.728 - - - 0.798 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. sfr1 ENSDARG00000021974 45 1.523 - - - - 0.775 - 0.748 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
44. relnl relnl 863 1.522 - 0.805 - - - 0.717 - - -
45. cacng8b ENSDARG00000070626 176 1.519 - 0.794 - - - 0.725 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
46. PLEKHM3 ENSDARG00000030633 496 1.514 - - - - - 0.808 0.706 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
47. apof ENSDARG00000090980 145 1.514 - - - - 0.720 0.794 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
48. irx5b ENSDARG00000074070 459 1.485 - 0.726 - - - 0.759 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
50. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
51. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
52. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
53. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
54. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
55. DUSP13 DUSP13 2 1 - 1.000 - - - - - - -
56. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -
57. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
58. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
59. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
60. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
61. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
62. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
63. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
64. PRR12 PRR12 38 1 - 1.000 - - - - - - -
65. ODF2 ODF2 6 1 - 1.000 - - - - - - -
66. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
67. KIF2A_1 ENSDARG00000043571 189 1 - 1.000 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
68. wdr17 ENSDARG00000075098 83 1 - 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
69. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
70. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
71. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
72. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
73. col8a1b ENSDARG00000003533 18 1 - 1.000 - - - - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
74. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
75. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
76. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
77. BX927122.3 BX927122.3 19 1 - 1.000 - - - - - - -
78. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
79. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
80. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
81. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
82. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
83. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
84. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
85. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
86. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
87. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
88. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
89. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
90. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
91. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
92. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
93. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
94. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
95. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
96. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
97. fermt3a fermt3a 56 1 - 1.000 - - - - - - -
98. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
99. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
100. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA