Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rims1a

Gene Name Gene ID Reads Annotation
rims1a ENSDARG00000074680 143 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]










Genes with expression patterns similar to rims1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims1a ENSDARG00000074680 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
2. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.954 - 1.000 - - - 0.954 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
3. BX470131.1 BX470131.1 86 1.934 - 1.000 - - - 0.934 - - -
4. st6gal1 ENSDARG00000044514 142 1.933 - 1.000 - - - 0.933 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
5. tmem178 ENSDARG00000020758 77 1.931 - 1.000 - - - 0.931 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. si:dkey-100n10.2 101 1.929 - 1.000 - - - 0.929 - - - si:dkey-100n10.2
7. si:dkey-225k4.1 ENSDARG00000092045 47 1.911 0.911 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
8. entpd2b ENSDARG00000044795 7 1.9 - 1.000 - - - 0.900 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
9. TMEM57 TMEM57 260 1.894 - 1.000 - - - 0.894 - - -
10. olfm1a ENSDARG00000018270 107 1.88 - 1.000 - - - 0.880 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.879 - 1.000 - - - 0.879 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. pycr1 pycr1 1258 1.866 - 1.000 - - - 0.866 - - -
13. hsp70l_1 ENSDARG00000055723 72 1.859 - 1.000 - - - 0.859 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
14. GRIN2B GRIN2B 140 1.854 - 1.000 - - - 0.854 - - -
15. CABZ01079192.1 ENSDARG00000101629 23 1.849 - 1.000 - - - 0.849 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
16. scg2b ENSDARG00000038574 345 1.843 - 1.000 - - - 0.843 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
17. cyp27a7 ENSDARG00000033802 216 1.808 - 1.000 - - - 0.808 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
18. HELZ2_1 ENSDARG00000012600 53 1.807 - 1.000 - - - 0.807 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. lhx5 ENSDARG00000057936 785 1.786 - 1.000 - - - 0.786 - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
20. ROBO3_1 ROBO3_1 468 1.781 - 0.893 - - - 0.888 - - -
21. SNX19 SNX19 350 1.78 - - - - - 0.923 0.857 - -
22. LINGO2 LINGO2 300 1.779 - 0.880 - - - 0.899 - - -
23. fez1 ENSDARG00000023174 701 1.752 - 1.000 - - - 0.752 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.74 - 0.826 - - - 0.914 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. BX321870.1 ENSDARG00000098519 9 1.726 - 1.000 - - 0.726 - - - -
26. toporsa ENSDARG00000037260 149 1.717 0.878 - - - - 0.839 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
27. aatkb ENSDARG00000104442 392 1.711 - 1.000 - - - 0.711 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
29. CT955963.1 ENSDARG00000100370 23 1.671 - 0.794 - - - 0.877 - - -
30. CR339053.3 CR339053.3 244 1.669 0.904 - - - - 0.765 - - -
31. vhl ENSDARG00000070617 663 1.668 0.804 - - - - 0.864 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
32. dcdc2b ENSDARG00000053744 181 1.662 - - - - - 0.823 0.839 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
33. RNF39 RNF39 52 1.651 0.911 - - - 0.740 - - - -
34. ripk2 ENSDARG00000104290 71 1.628 - - - - - 0.820 0.808 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
35. CABZ01112521.1 CABZ01112521.1 83 1.627 0.762 0.865 - - - - - - -
36. mir34 176 1.623 0.850 - - - - 0.773 - - - microRNA 34
37. BX936443.2 BX936443.2 28 1.619 0.744 0.875 - - - - - - -
38. shisa7 shisa7 181 1.604 - 0.756 - - - 0.848 - - -
39. RAC1_2 RAC1_2 51 1.571 - - - - 0.731 0.840 - - -
40. CR759921.2 CR759921.2 583 1.55 - - - - - 0.717 0.833 - -
41. phf23b ENSDARG00000036305 1073 1.535 - 0.780 - - - 0.755 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.526 - 0.728 - - - 0.798 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. sfr1 ENSDARG00000021974 45 1.523 - - - - 0.775 - 0.748 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
44. relnl relnl 863 1.522 - 0.805 - - - 0.717 - - -
45. cacng8b ENSDARG00000070626 176 1.519 - 0.794 - - - 0.725 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
46. PLEKHM3 ENSDARG00000030633 496 1.514 - - - - - 0.808 0.706 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
47. apof ENSDARG00000090980 145 1.514 - - - - 0.720 0.794 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
48. irx5b ENSDARG00000074070 459 1.485 - 0.726 - - - 0.759 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
50. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
51. DUSP13 DUSP13 2 1 - 1.000 - - - - - - -
52. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
53. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
54. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
55. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
56. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - 1.000 - - - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
57. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
58. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
59. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
60. PRR12 PRR12 38 1 - 1.000 - - - - - - -
61. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
62. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
63. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
64. cdh18 cdh18 64 1 - 1.000 - - - - - - -
65. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
66. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
67. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
68. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
69. LRG1 LRG1 304 1 - 1.000 - - - - - - -
70. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
71. AL954676.2 AL954676.2 50 1 - 1.000 - - - - - - -
72. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
73. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
74. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
75. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
76. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
77. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
78. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
79. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
80. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
81. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
82. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
83. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
84. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
85. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
86. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
87. mtus2 mtus2 22 1 - 1.000 - - - - - - -
88. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
89. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
90. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
91. CMA1_3 CMA1_3 0 1 - 1.000 - - - - - - -
92. vcam1 vcam1 243 1 - 1.000 - - - - - - -
93. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
94. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
95. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
96. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
97. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
98. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
99. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
100. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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