Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rims1a

Gene Name Gene ID Reads Annotation
rims1a ENSDARG00000074680 143 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]










Genes with expression patterns similar to rims1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims1a ENSDARG00000074680 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
2. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.954 - 1.000 - - - 0.954 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
3. BX470131.1 BX470131.1 86 1.934 - 1.000 - - - 0.934 - - -
4. st6gal1 ENSDARG00000044514 142 1.933 - 1.000 - - - 0.933 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
5. tmem178 ENSDARG00000020758 77 1.931 - 1.000 - - - 0.931 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. si:dkey-100n10.2 101 1.929 - 1.000 - - - 0.929 - - - si:dkey-100n10.2
7. si:dkey-225k4.1 ENSDARG00000092045 47 1.911 0.911 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
8. entpd2b ENSDARG00000044795 7 1.9 - 1.000 - - - 0.900 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
9. TMEM57 TMEM57 260 1.894 - 1.000 - - - 0.894 - - -
10. olfm1a ENSDARG00000018270 107 1.88 - 1.000 - - - 0.880 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.879 - 1.000 - - - 0.879 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. pycr1 pycr1 1258 1.866 - 1.000 - - - 0.866 - - -
13. hsp70l_1 ENSDARG00000055723 72 1.859 - 1.000 - - - 0.859 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
14. GRIN2B GRIN2B 140 1.854 - 1.000 - - - 0.854 - - -
15. CABZ01079192.1 ENSDARG00000101629 23 1.849 - 1.000 - - - 0.849 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
16. scg2b ENSDARG00000038574 345 1.843 - 1.000 - - - 0.843 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
17. cyp27a7 ENSDARG00000033802 216 1.808 - 1.000 - - - 0.808 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
18. HELZ2_1 ENSDARG00000012600 53 1.807 - 1.000 - - - 0.807 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. lhx5 ENSDARG00000057936 785 1.786 - 1.000 - - - 0.786 - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
20. ROBO3_1 ROBO3_1 468 1.781 - 0.893 - - - 0.888 - - -
21. SNX19 SNX19 350 1.78 - - - - - 0.923 0.857 - -
22. LINGO2 LINGO2 300 1.779 - 0.880 - - - 0.899 - - -
23. fez1 ENSDARG00000023174 701 1.752 - 1.000 - - - 0.752 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.74 - 0.826 - - - 0.914 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. BX321870.1 ENSDARG00000098519 9 1.726 - 1.000 - - 0.726 - - - -
26. toporsa ENSDARG00000037260 149 1.717 0.878 - - - - 0.839 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
27. aatkb ENSDARG00000104442 392 1.711 - 1.000 - - - 0.711 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
29. CT955963.1 ENSDARG00000100370 23 1.671 - 0.794 - - - 0.877 - - -
30. CR339053.3 CR339053.3 244 1.669 0.904 - - - - 0.765 - - -
31. vhl ENSDARG00000070617 663 1.668 0.804 - - - - 0.864 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
32. dcdc2b ENSDARG00000053744 181 1.662 - - - - - 0.823 0.839 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
33. RNF39 RNF39 52 1.651 0.911 - - - 0.740 - - - -
34. ripk2 ENSDARG00000104290 71 1.628 - - - - - 0.820 0.808 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
35. CABZ01112521.1 CABZ01112521.1 83 1.627 0.762 0.865 - - - - - - -
36. mir34 176 1.623 0.850 - - - - 0.773 - - - microRNA 34
37. BX936443.2 BX936443.2 28 1.619 0.744 0.875 - - - - - - -
38. shisa7 shisa7 181 1.604 - 0.756 - - - 0.848 - - -
39. RAC1_2 RAC1_2 51 1.571 - - - - 0.731 0.840 - - -
40. CR759921.2 CR759921.2 583 1.55 - - - - - 0.717 0.833 - -
41. phf23b ENSDARG00000036305 1073 1.535 - 0.780 - - - 0.755 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.526 - 0.728 - - - 0.798 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. sfr1 ENSDARG00000021974 45 1.523 - - - - 0.775 - 0.748 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
44. relnl relnl 863 1.522 - 0.805 - - - 0.717 - - -
45. cacng8b ENSDARG00000070626 176 1.519 - 0.794 - - - 0.725 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
46. PLEKHM3 ENSDARG00000030633 496 1.514 - - - - - 0.808 0.706 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
47. apof ENSDARG00000090980 145 1.514 - - - - 0.720 0.794 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
48. irx5b ENSDARG00000074070 459 1.485 - 0.726 - - - 0.759 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
50. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
51. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
52. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
53. FAXC FAXC 102 1 - 1.000 - - - - - - -
54. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
55. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
56. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
57. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
58. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
59. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
60. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
61. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
62. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
63. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
64. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
65. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
66. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
67. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
68. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
69. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
70. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
71. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
72. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
73. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
74. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
75. PRR12 PRR12 38 1 - 1.000 - - - - - - -
76. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
77. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
78. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
79. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
80. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
81. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
82. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
83. kcna1 kcna1 174 1 - 1.000 - - - - - - -
84. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
85. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
86. fermt3a fermt3a 56 1 - 1.000 - - - - - - -
87. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
88. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
89. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
90. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
91. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
92. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
93. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
94. MOB2 MOB2 4 1 - 1.000 - - - - - - -
95. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
96. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
97. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
98. ABCC6 ABCC6 5 1 - 1.000 - - - - - - -
99. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
100. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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