Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rimkla

Gene Name Gene ID Reads Annotation
rimkla ENSDARG00000016830, ENSDARG00000112193 4111 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]










Genes with expression patterns similar to rimkla

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
2. lypla2 ENSDARG00000053656 8971 4.613 - 0.718 0.867 0.731 - 0.824 0.763 0.710 - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
3. dnajc5aa ENSDARG00000042948 2885 4.131 0.736 - 0.965 - - 0.837 0.825 0.768 - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
4. kdm5c ENSDARG00000006124 4389 3.963 - 0.720 0.864 0.738 - 0.823 - - 0.818 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
5. ubl3b ENSDARG00000021556 1210 3.334 - 0.775 0.920 - - - 0.789 - 0.850 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
6. dut ENSDARG00000106529 3120 3.319 - 0.882 0.897 - - - 0.756 - 0.784 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
7. zswim5 ENSDARG00000055900 4243 3.278 - - 0.910 - - 0.844 0.817 - 0.707 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
8. rbm25 rbm25 3629 3.271 - 0.772 0.919 - - 0.821 0.759 - -
9. zgc:113348 ENSDARG00000103795 1351 3.214 - - 0.939 - - 0.729 0.701 - 0.845 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
10. drg1 ENSDARG00000039345 7545 3.206 - - 0.865 - - 0.756 0.773 - 0.812 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
11. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.155 - - - - 0.716 0.889 0.809 - 0.741 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
12. clstn1 ENSDARG00000031720 5286 3.154 - - 0.901 - - 0.751 0.758 - 0.744 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
13. FP016176.1 FP016176.1 7030 3.14 - 0.786 - - - 0.805 0.815 - 0.734
14. fzd3a ENSDARG00000021664 1958 3.139 - - - 0.757 - 0.818 0.815 0.749 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
15. cspg5a ENSDARG00000069981 1699 3.13 - - - 0.719 0.771 - 0.769 - 0.871 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
16. nusap1 ENSDARG00000002403 6953 3.123 - - 0.855 - 0.737 0.804 0.727 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
17. pcdh19 ENSDARG00000034344 2378 3.086 - 0.780 - - 0.737 0.709 0.860 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
18. mdkb ENSDARG00000020708 5393 3.079 - - - 0.724 - 0.826 0.713 - 0.816 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
19. khsrp ENSDARG00000026489 15738 3.058 0.706 - - - - 0.887 0.734 - 0.731 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
20. prnprs3 ENSDARG00000003705 1854 3.053 0.806 0.714 - - - 0.751 0.782 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
21. mllt10 ENSDARG00000045401 7557 3.032 - 0.722 - - - 0.796 0.722 0.792 - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
22. cpsf1 ENSDARG00000034178 2036 2.589 - - 0.954 - - 0.763 - - 0.872 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
23. AKT3 AKT3 1729 2.586 - - - - - 0.892 0.755 - 0.939
24. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.584 - - - - - 0.908 0.829 - 0.847 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
25. sema6a ENSDARG00000102165 1401 2.582 - - 0.928 - - 0.889 0.765 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
26. ccdc85ca ENSDARG00000005232 3218 2.574 0.795 - 0.921 - - 0.858 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
27. st8sia2 ENSDARG00000018788 2183 2.565 - - - - - 0.869 0.763 - 0.933 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
28. myt1b ENSDARG00000102879 5411 2.555 - - - - - 0.900 0.765 - 0.890 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
29. stxbp1a ENSDARG00000001994 5154 2.543 - - 0.921 - - 0.873 0.749 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
30. cd99l2 ENSDARG00000056722 5036 2.532 - - - - - 0.883 0.780 - 0.869 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
31. irx5a ENSDARG00000034043 1694 2.528 - - - - - 0.850 0.795 - 0.883 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
32. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.522 - - - 0.724 - - 0.874 - 0.924 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
33. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.517 - - - - - 0.873 0.822 - 0.822 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
34. hug 4100 2.515 - - - - - 0.862 0.746 - 0.907 HuG, transcript variant X2
35. TUBB8P7_1 TUBB8P7_1 2722 2.512 - - 0.925 - - 0.865 0.722 - -
36. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.509 - - - - - 0.816 0.775 - 0.918 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
37. stmn1b ENSDARG00000033655 9491 2.499 - - - - - 0.816 0.782 - 0.901 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
38. CABZ01087568.1 CABZ01087568.1 1487 2.497 - - 0.919 - - - 0.714 - 0.864
39. sipa1l2 ENSDARG00000061640 4545 2.491 - - 0.936 - - 0.821 - 0.734 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
40. nova2 ENSDARG00000017673 7685 2.488 - - - - - 0.877 0.763 - 0.848 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
41. vdac1 ENSDARG00000045132 8051 2.481 - - - - - 0.824 0.824 - 0.833 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
42. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.477 - - - - - 0.890 0.769 - 0.818 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
43. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.473 - - 0.861 - - 0.838 0.774 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
44. nrn1a ENSDARG00000071860 1311 2.472 - - - - - 0.849 0.735 - 0.888 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
45. plp1a ENSDARG00000103732 3544 2.47 - - - - - 0.852 0.767 - 0.851 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
46. msi1 ENSDARG00000010710 2634 2.465 - - - - - 0.843 0.749 - 0.873 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
47. med19a ENSDARG00000037392, ENSDARG00000114246 2231 2.465 - 0.826 0.924 - - - 0.715 - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
48. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.462 0.779 - - - - 0.879 0.804 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
49. pou3f3a ENSDARG00000042032 2835 2.459 - - 0.948 - - 0.748 0.763 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
50. SERBP1 SERBP1 9276 2.453 - - 0.855 - - 0.778 0.820 - -
51. rusc1 ENSDARG00000078125 617 2.452 - - - - - 0.821 0.762 - 0.869 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
52. srsf6b ENSDARG00000016783 9926 2.451 - - - - - 0.779 0.745 - 0.927 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
53. stmn2a ENSDARG00000033234 2272 2.451 - - - - - 0.838 0.738 - 0.875 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
54. ADAM22 ENSDARG00000060532 2259 2.448 - - - - - 0.828 0.768 - 0.852 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
55. gad2 ENSDARG00000015537 724 2.447 - - - - - 0.840 0.714 - 0.893 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
56. fscn1a ENSDARG00000059680 3999 2.443 - - - 0.745 - 0.833 - - 0.865 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
57. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.441 - - - - - 0.880 0.787 - 0.774 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
58. nes ENSDARG00000088805 2710 2.438 - - 0.911 - - 0.804 0.723 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
59. CABZ01111990.1 CABZ01111990.1 4374 2.437 - - - - - 0.737 0.824 - 0.876
60. tle2 5014 2.432 - 0.850 - - - 0.742 0.840 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
61. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.426 - - - - - 0.852 0.867 - 0.707 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
62. cadm4 ENSDARG00000040291 2284 2.425 - - - - - 0.812 0.820 - 0.793 cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
63. tial1 ENSDARG00000009525 1856 2.419 - - 0.944 - - 0.708 0.767 - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
64. tuba1c ENSDARG00000055216 8384 2.416 - - - - 0.779 0.880 0.757 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
65. ZNF618 ENSDARG00000071469 2347 2.416 - 0.752 - 0.806 - - 0.858 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
66. TNRC6C_1 TNRC6C_1 6574 2.413 - 0.747 0.866 - - 0.800 - - -
67. ek1 ENSDARG00000020080 742 2.412 - - 0.941 - - 0.716 0.755 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
68. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 2.411 - - - - - 0.702 0.783 - 0.926 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
69. tmsb ENSDARG00000054911 6411 2.408 - - - - - 0.889 0.757 - 0.762 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
70. rbfox3 rbfox3 1443 2.407 - - - - - 0.814 0.772 - 0.821
71. abi2b ENSDARG00000014875 2259 2.405 - - - - - 0.787 0.747 - 0.871 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
72. gse1 ENSDARG00000062020 2337 2.405 - 0.820 - - - - 0.718 - 0.867 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
73. xpr1 xpr1 840 2.403 - - - - - 0.787 0.738 - 0.878
74. hoxd3a ENSDARG00000059280 1919 2.395 0.752 0.739 - - - 0.904 - - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
75. hmgb3a ENSDARG00000056725 15668 2.393 0.706 - - - - 0.896 0.791 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
76. dpysl3 ENSDARG00000002587 4381 2.389 - - - - - 0.869 0.799 - 0.721 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
77. irx1b ENSDARG00000056594 2224 2.389 - - - - - 0.821 0.752 - 0.816 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
78. ssbp4 ENSDARG00000056483 10196 2.384 - - 0.900 - - 0.743 0.741 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
79. setdb1b ENSDARG00000099021 2937 2.382 - - 0.939 - - - 0.726 - 0.717 SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
80. plagx ENSDARG00000036855 3768 2.381 - - - 0.729 - - 0.798 - 0.854 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
81. hn1b hn1b 7325 2.378 0.723 0.844 - - - - 0.811 - -
82. BX957337.1 BX957337.1 1685 2.377 - - - - - 0.873 0.739 0.765 -
83. cand1 ENSDARG00000017841 8164 2.375 - 0.725 0.885 - - 0.765 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
84. hnrnpub ENSDARG00000004735 16496 2.374 - - - 0.726 - 0.848 0.800 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
85. pak2b ENSDARG00000018476 4331 2.37 - 0.737 - - - 0.764 0.869 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
86. smarcd1 ENSDARG00000019004 6028 2.367 - - - - - 0.788 0.860 - 0.719 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
87. ZC3H4 ENSDARG00000078355 1888 2.367 - 0.756 - - - 0.810 0.801 - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
88. BAZ2B BAZ2B 3285 2.367 - - - - - 0.830 0.745 0.792 -
89. hmgb1b ENSDARG00000030479 10398 2.366 0.729 - - - - 0.853 0.784 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
90. SNAP91 ENSDARG00000098809 556 2.365 - - - - - 0.837 0.721 - 0.807 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
91. slc17a6b ENSDARG00000041150 823 2.363 - - - - - 0.810 0.778 0.775 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
92. pcdh18a ENSDARG00000089805 1096 2.362 - - - - - 0.762 0.759 - 0.841 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
93. mier1a ENSDARG00000041072 1690 2.358 0.724 - - 0.711 - - - - 0.923 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
94. ndc80 ENSDARG00000071694 1162 2.351 - - 0.915 - - 0.719 0.717 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
95. si:ch211-278j3.3 ENSDARG00000020284 478 2.35 0.722 - - - - 0.835 0.793 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
96. CHL1 CHL1 1553 2.347 - - - - - 0.764 0.793 - 0.790
97. mapk12b ENSDARG00000006409 2246 2.343 - - - 0.745 - 0.839 0.759 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
98. vsnl1b ENSDARG00000044053 1120 2.342 - 0.736 - - - 0.874 0.732 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
99. gnao1a ENSDARG00000016676 8184 2.335 0.736 - - - - - 0.776 - 0.823 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
100. actr1 ENSDARG00000011611 3879 2.332 - 0.716 - - - 0.753 0.863 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]

There are 2487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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