Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhol

Gene Name Gene ID Reads Annotation
rhol ENSDARG00000070666 0 rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]










Genes with expression patterns similar to rhol

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhol ENSDARG00000070666 0 2 - - - 1.000 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
2. shank3a ENSDARG00000063332 5 1.792 - - - 0.792 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
3. ZNF423 ENSDARG00000059707 11 1.761 - - - 1.000 0.761 - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
4. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
5. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
6. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
7. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
8. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
9. ptger2a ENSDARG00000011434 6 1 - - - - 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
10. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
11. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
12. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
13. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
14. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
15. PEG3_18 PEG3_18 0 1 - - - - 1.000 - - - -
16. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
17. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
18. snoU13 snoU13 2 1 - - - 1.000 - - - - -
19. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
20. dusp19 dusp19 0 1 - - - - 1.000 - - - -
21. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
22. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
23. anks4b ENSDARG00000036846 8 1 - - - - 1.000 - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
24. FETUB ENSDARG00000053973 4 1 - - - - 1.000 - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
25. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
26. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
27. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - - - 1.000 - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
28. st3gal1l ENSDARG00000079310 10 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
29. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
30. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
31. ZNF70_5 ZNF70_5 25 1 - - - - 1.000 - - - -
32. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
33. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
34. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
35. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
36. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - 1.000 - - - -
37. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - 1.000 - - - -
38. sox8 sox8 109 1 - - - 1.000 - - - - -
39. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
40. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
41. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
42. si:ch211-42i6.2 ENSDARG00000086130 0 1 - - - - 1.000 - - - - si:ch211-42i6.2 [Source:ZFIN;Acc:ZDB-GENE-110913-9]
43. CABZ01001466.1 CABZ01001466.1 1 1 - - - - 1.000 - - - -
44. zgc:175107 ENSDARG00000075417 39 1 - - - - 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
45. BX004816.1 ENSDARG00000040497 0 1 - - - - 1.000 - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571124]
46. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
47. phc3 ENSDARG00000074604 2 1 - - - - 1.000 - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
48. gzmk ENSDARG00000028780 1 1 - - - - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
49. btf3l4 ENSDARG00000089681 2 1 - - - - 1.000 - - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
50. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
51. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
52. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
53. U6_21 U6_21 0 1 - - - 1.000 - - - - -
54. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
55. si:ch211-281k12.1 si:ch211-281k12.1 1 1 - - - - 1.000 - - - -
56. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
57. lgsn ENSDARG00000007715 8 1 - - - - 1.000 - - - - lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
58. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - 1.000 - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
59. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
60. kiss1 ENSDARG00000075829 4 1 - - - - 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
61. TSPEAR TSPEAR 9 1 - - - - 1.000 - - - -
62. agt ENSDARG00000016412 17 1 - - - - 1.000 - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
63. fgf23 ENSDARG00000045854 2 1 - - - - 1.000 - - - - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
64. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
65. rhpn1 ENSDARG00000052454 3 1 - - - - 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
66. zp3b ENSDARG00000039828 15 1 - - - - 1.000 - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
67. zgc:173708 zgc:173708 2 1 - - - - 1.000 - - - -
68. c6ast3 ENSDARG00000024503 2 1 - - - - 1.000 - - - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
69. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
70. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
71. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
72. si:dkey-65l23.1 2 1 - - - - 1.000 - - - - si:dkey-65l23.1
73. cd226 ENSDARG00000045391 2 1 - - - - 1.000 - - - - CD226 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-1322]
74. CU655969.1 CU655969.1 0 1 - - - - 1.000 - - - -
75. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
76. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
77. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
78. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
79. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
80. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - 1.000 - - - -
81. U3_9 U3_9 4 1 - - - - 1.000 - - - -
82. arl8 ENSDARG00000094709 6 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
83. CU694320.1 CU694320.1 6 1 - - - - 1.000 - - - -
84. svopa ENSDARG00000056833 14 1 - - - - 1.000 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
85. EDN3 14 1 - - - - 1.000 - - - - endothelin 3
86. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
87. AL845295.2 ENSDARG00000096472 0 1 - - - - 1.000 - - - -
88. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
89. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - - - - 1.000 - - - -
90. zgc:172271 ENSDARG00000013240 2 1 - - - - 1.000 - - - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
91. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
92. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
93. gnrhr2 ENSDARG00000003553, ENSDARG00000113696 0 1 - - - - 1.000 - - - - gonadotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090128-3]
94. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - 1.000 - - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
95. CU694951.3 CU694951.3 0 1 - - - - 1.000 - - - -
96. C17orf105 C17orf105 1 1 - - - - 1.000 - - - -
97. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
98. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
99. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
100. si:dkeyp-33e11.1 6 1 - - - - 1.000 - - - - si:dkeyp-33e11.1, transcript variant X3

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA