Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhoad

Gene Name Gene ID Reads Annotation
rhoad rhoad 8007










Genes with expression patterns similar to rhoad

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhoad rhoad 8007 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mybpc3 ENSDARG00000011615 7271 1.922 0.934 - - - - - 0.988 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
3. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.902 0.943 0.959 - - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
4. kpna2 ENSDARG00000038066 7954 1.873 0.926 0.947 - - - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
5. rpl4 ENSDARG00000041182 18655 1.846 0.852 - - - - - 0.994 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
6. sdprb sdprb 13647 1.827 - - - - 0.833 - 0.994 - -
7. ep300b ENSDARG00000061108 5173 1.826 0.964 - - - 0.862 - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
8. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.817 0.819 - - - - - 0.998 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
9. CPT1A CPT1A 4004 1.799 0.904 0.895 - - - - - - -
10. nop16 ENSDARG00000044402 3645 1.793 - 0.936 - - 0.857 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
11. gars ENSDARG00000059070 17015 1.787 0.914 0.873 - - - - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
12. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.782 0.853 0.929 - - - - - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
13. arhgef1b ENSDARG00000055837 2330 1.762 - 0.946 - - 0.816 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
14. cdc42se1 ENSDARG00000023724 3901 1.761 - 0.967 - - 0.794 - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
15. ass1 8099 1.749 0.812 0.937 - - - - - - - argininosuccinate synthase 1
16. get4 ENSDARG00000024398 1818 1.748 0.972 - - - - 0.776 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
17. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.744 - - - - - 0.745 0.999 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
18. farp1 ENSDARG00000074381 406 1.735 - 0.936 - - 0.799 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
19. rcn1 ENSDARG00000070006 8455 1.734 - 0.922 - - 0.812 - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
20. aldh4a1 ENSDARG00000038207 4639 1.727 - 0.914 - - - 0.813 - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
21. glrx ENSDARG00000028106 16225 1.726 0.833 0.893 - - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
22. dkc1 ENSDARG00000016484 7088 1.723 0.939 - - - 0.784 - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
23. CNOT2 ENSDARG00000061802 1500 1.722 - 0.934 - - 0.788 - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
24. poc1bl ENSDARG00000012745 2451 1.72 0.943 - - - 0.777 - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
25. amot ENSDARG00000078335 1757 1.714 - 0.928 - - 0.786 - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
26. carhsp1 ENSDARG00000053129 2100 1.71 - 0.946 - - - 0.764 - - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
27. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.696 0.885 - - - 0.811 - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
28. anapc16 ENSDARG00000013822 5857 1.692 - 0.962 0.730 - - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
29. ELMSAN1_1 ELMSAN1_1 1337 1.687 0.969 - - - - - - - 0.718
30. fubp1 ENSDARG00000029248 15259 1.686 - 0.912 - - 0.774 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
31. gng5 ENSDARG00000039830 12102 1.681 - 0.899 0.782 - - - - - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
32. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.679 0.965 - - - - - - - 0.714 N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
33. CU633744.1 CU633744.1 2074 1.674 0.925 - - - - 0.749 - - -
34. znf395a ENSDARG00000060113 3874 1.671 - 0.933 - - - 0.738 - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
35. fndc3ba ENSDARG00000078179 2753 1.665 - 0.944 - - - - - - 0.721 fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
36. crtap ENSDARG00000018010 7722 1.663 0.876 - - - - - - - 0.787 cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
37. pdia5 ENSDARG00000069242 3576 1.655 - 0.937 - - - 0.718 - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
38. FAM110D FAM110D 3632 1.654 0.914 - - - - 0.740 - - -
39. marveld2a ENSDARG00000025076 917 1.648 - 0.946 - - - 0.702 - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
40. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.647 - 0.941 - - - 0.706 - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
41. cox5ab ENSDARG00000099663 5689 1.641 - 0.931 0.710 - - - - - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
42. LGALS3 LGALS3 8665 1.641 0.914 - - - - - - - 0.727
43. abcf1 ENSDARG00000031795 8635 1.636 - 0.840 - - - 0.796 - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
44. si:dkey-95p16.2 ENSDARG00000093484 3413 1.636 - - - - 0.852 0.784 - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
45. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.633 - 0.926 - - - 0.707 - - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
46. COLGALT1 ENSDARG00000073974 5069 1.627 - - - - 0.817 0.810 - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
47. numb ENSDARG00000027279 2905 1.627 0.905 - - - - 0.722 - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
48. clint1a ENSDARG00000025535 4965 1.609 - 0.884 - - - - - - 0.725 clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
49. eif2s1b ENSDARG00000052178 11961 1.604 0.845 0.759 - - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
50. perp ENSDARG00000063572 6423 1.603 0.899 - 0.704 - - - - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
51. wif1 ENSDARG00000005541 1689 1.583 - - - - 0.800 0.783 - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
52. edf1 ENSDARG00000009950 10518 1.542 - - - - 0.801 0.741 - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
53. hgs ENSDARG00000020960 3574 1.54 - - - - 0.810 0.730 - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
54. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.513 - - - - 0.759 0.754 - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
55. fkbp7 ENSDARG00000010962 2986 1.476 - - - - 0.732 - - - 0.744 FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
56. si:ch211-71n6.4 ENSDARG00000102234 2499 1 - - - - - - 1.000 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
57. foxp1a ENSDARG00000004843 3961 1 - - - - - - 1.000 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
58. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1 - - - - - - 1.000 - -
59. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1 - - - - - - 1.000 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
60. psmb1 ENSDARG00000009640 8628 1 - - - - - - 1.000 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
61. SGPP1 ENSDARG00000060534 1802 1 - - - - - - 1.000 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
62. SEMA5B SEMA5B 1316 1 - - - - - - 1.000 - -
63. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1 - - - - - - 1.000 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
64. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1 - - - - - - 1.000 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
65. fam133b ENSDARG00000013863 5070 1 - - - - - - 1.000 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
66. clasp2 ENSDARG00000020345 3382 1 - - - - - - 1.000 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
67. map7d3 ENSDARG00000060771 1739 1 - - - - - - 1.000 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
68. sfrp5 ENSDARG00000039041 1777 1 - - - - - - 1.000 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
69. smyd2b ENSDARG00000005629 8181 1 - - - - - - 1.000 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
70. aaas ENSDARG00000102274 1192 1 - - - - - - 1.000 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
71. vbp1 ENSDARG00000030241 10619 0.999 - - - - - - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
72. kpnb1 ENSDARG00000104889 9282 0.999 - - - - - - 0.999 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
73. CR548630.1 CR548630.1 3301 0.999 - - - - - - 0.999 - -
74. selt2 12741 0.999 - - - - - - 0.999 - - selenoprotein T, 2
75. CAPN2 CAPN2 1497 0.999 - - - - - - 0.999 - -
76. klf11a ENSDARG00000030844 3972 0.998 - - - - - - 0.998 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
77. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.997 - - - - - - 0.997 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
78. hspe1 ENSDARG00000056167 21636 0.997 - - - - - - 0.997 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
79. apg3l apg3l 5153 0.994 - - - - - - 0.994 - -
80. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.992 - - - - - - 0.992 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
81. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.992 - - - - - - 0.992 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
82. syncrip ENSDARG00000040184 24690 0.991 - - - - - - 0.991 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
83. tnni1al 8272 0.988 - - - - - - 0.988 - - troponin I, skeletal, slow like, transcript variant X1
84. tegt ENSDARG00000077934 27182 0.977 - - - - - - 0.977 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
85. f11r f11r 16668 0.974 - - - - - - 0.974 - -
86. atp2a1l ENSDARG00000035458 6222 0.972 - - - - - - 0.972 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
87. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.971 - 0.971 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
88. tarbp2 ENSDARG00000070471 1946 0.97 0.970 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
89. MARK4 ENSDARG00000024966 3377 0.97 0.970 - - - - - - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
90. CU571336.1 ENSDARG00000099892 2164 0.968 0.968 - - - - - - - -
91. psmc1a ENSDARG00000030537 2799 0.968 0.968 - - - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
92. gtpbp4 ENSDARG00000018961 5323 0.968 0.968 - - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
93. atp5ia 4773 0.967 0.967 - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
94. hoxa10b ENSDARG00000031337 3992 0.967 - 0.967 - - - - - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
95. wdr3 ENSDARG00000011079 1403 0.966 0.966 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
96. agrn ENSDARG00000079388, ENSDARG00000110127 5806 0.965 - 0.965 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
97. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 0.964 0.964 - - - - - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
98. tmed1b ENSDARG00000017255 2238 0.964 0.964 - - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
99. sema4e ENSDARG00000052997 607 0.964 0.964 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
100. dcp1b ENSDARG00000045484 534 0.964 0.964 - - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]

There are 904 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA