Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhbdd3

Gene Name Gene ID Reads Annotation
rhbdd3 ENSDARG00000079816 2 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]










Genes with expression patterns similar to rhbdd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhbdd3 ENSDARG00000079816 2 4 1.000 - - 1.000 - 1.000 - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
2. cyp2n13 ENSDARG00000042953 10 2 - - - - - 1.000 - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
3. dcp2_1 ENSDARG00000104242 74 2 1.000 - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
4. mir15a-1 36 2 1.000 - - - - 1.000 - - - microRNA 15a-1
5. TDRD6 ENSDARG00000070052 1 2 - - - - - 1.000 - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
6. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 2 1.000 - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
7. si:ch211-208f21.4 si:ch211-208f21.4 4 2 1.000 - - - - 1.000 - - -
8. FJX1 ENSDARG00000035873 22 2 1.000 - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
9. zgc:92249 14 1.961 - - - 0.961 - 1.000 - - - zgc:92249
10. wnt10b ENSDARG00000040925 162 1.895 0.895 - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
11. tbkbp1 ENSDARG00000061473 24 1.869 1.000 - - - - 0.869 - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
12. NLRP1 NLRP1 54 1.828 1.000 - - - - 0.828 - - -
13. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 - - - - - 1.000 - - 0.761
14. purg ENSDARG00000099187, ENSDARG00000114450 33 1.732 - - - 0.732 - 1.000 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
15. CR847990.1 CR847990.1 21 1.731 1.000 - - - - 0.731 - - -
16. skor1a ENSDARG00000069030 19 1.728 - - - 0.728 - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
17. adprhl1 ENSDARG00000041589 34 1.724 1.000 - - - - 0.724 - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
18. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.641 0.764 - - - - 0.877 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
19. CSMD1 CSMD1 15 1.637 - - - 0.838 - 0.799 - - -
20. MAN1B1 MAN1B1 47 1.627 0.799 - - - - 0.828 - - -
21. nrxn3a ENSDARG00000043746 54 1.611 0.764 - - - - 0.847 - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
22. RAPGEF4 ENSDARG00000079872 82 1.552 0.777 - - - - 0.775 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
23. stx12l ENSDARG00000044605 99 1.495 0.705 - - - - 0.790 - - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
24. SLC4A5 9 1.439 0.715 - - - - 0.724 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
25. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
26. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
27. htr5al htr5al 6 1 - - - - - - - - 1.000
28. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
29. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
30. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
31. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
32. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
33. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
34. FAM46D FAM46D 0 1 - - - - - - - - 1.000
35. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
36. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
37. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
38. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
39. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
40. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
41. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
42. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
43. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
44. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
45. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
46. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
47. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
48. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
49. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
50. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
51. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
52. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
53. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
54. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
55. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
56. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
57. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
58. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
59. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
60. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
61. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
62. gria2b ENSDARG00000052765 188 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
63. CABZ01072254.1 ENSDARG00000076111 4 1 1.000 - - - - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
64. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
65. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
66. hoxa4a 37 1 - - - 1.000 - - - - - homeobox A4a, transcript variant X4
67. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
68. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
69. sgk494b ENSDARG00000086169 1 1 - - - 1.000 - - - - - uncharacterized serine/threonine-protein kinase SgK494b [Source:ZFIN;Acc:ZDB-GENE-120215-252]
70. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
71. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
72. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
73. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
74. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
75. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
76. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
77. BX537113.1_1 BX537113.1_1 3 1 - - - 1.000 - - - - -
78. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
79. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
80. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
81. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
82. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
83. tnni1a ENSDARG00000000474 1 1 - - - 1.000 - - - - - troponin I type 1a (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-030616-266]
84. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
85. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
86. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
87. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
88. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
89. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
90. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
91. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
92. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
93. MEI1 MEI1 2 1 - - - - - - - - 1.000
94. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
95. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
96. GPR114 GPR114 1 1 - - - - - 1.000 - - -
97. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
98. si:dkey-151m22.9 si:dkey-151m22.9 6 1 1.000 - - - - - - - -
99. zgc:165514 ENSDARG00000076214 3 1 - - - 1.000 - - - - - zgc:165514 [Source:ZFIN;Acc:ZDB-GENE-041008-169]
100. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1

There are 758 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA