Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhbdd3

Gene Name Gene ID Reads Annotation
rhbdd3 ENSDARG00000079816 2 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]










Genes with expression patterns similar to rhbdd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhbdd3 ENSDARG00000079816 2 4 1.000 - - 1.000 - 1.000 - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
2. TDRD6 ENSDARG00000070052 1 2 - - - - - 1.000 - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
3. si:ch211-208f21.4 si:ch211-208f21.4 4 2 1.000 - - - - 1.000 - - -
4. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 2 1.000 - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
5. dcp2_1 ENSDARG00000104242 74 2 1.000 - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
6. FJX1 ENSDARG00000035873 22 2 1.000 - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
7. mir15a-1 36 2 1.000 - - - - 1.000 - - - microRNA 15a-1
8. cyp2n13 ENSDARG00000042953 10 2 - - - - - 1.000 - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
9. zgc:92249 14 1.961 - - - 0.961 - 1.000 - - - zgc:92249
10. wnt10b ENSDARG00000040925 162 1.895 0.895 - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
11. tbkbp1 ENSDARG00000061473 24 1.869 1.000 - - - - 0.869 - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
12. NLRP1 NLRP1 54 1.828 1.000 - - - - 0.828 - - -
13. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 - - - - - 1.000 - - 0.761
14. purg ENSDARG00000099187, ENSDARG00000114450 33 1.732 - - - 0.732 - 1.000 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
15. CR847990.1 CR847990.1 21 1.731 1.000 - - - - 0.731 - - -
16. skor1a ENSDARG00000069030 19 1.728 - - - 0.728 - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
17. adprhl1 ENSDARG00000041589 34 1.724 1.000 - - - - 0.724 - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
18. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.641 0.764 - - - - 0.877 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
19. CSMD1 CSMD1 15 1.637 - - - 0.838 - 0.799 - - -
20. MAN1B1 MAN1B1 47 1.627 0.799 - - - - 0.828 - - -
21. nrxn3a ENSDARG00000043746 54 1.611 0.764 - - - - 0.847 - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
22. RAPGEF4 ENSDARG00000079872 82 1.552 0.777 - - - - 0.775 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
23. stx12l ENSDARG00000044605 99 1.495 0.705 - - - - 0.790 - - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
24. SLC4A5 9 1.439 0.715 - - - - 0.724 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
25. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
26. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
27. psmb11 psmb11 5 1 - - - - - 1.000 - - -
28. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
29. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
30. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
31. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
32. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
33. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
34. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
35. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
36. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
37. glcea ENSDARG00000005095 33 1 1.000 - - - - - - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
38. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
39. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
40. meis2a ENSDARG00000098240 5 1 1.000 - - - - - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
41. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
42. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
43. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
44. WNK3 WNK3 36 1 1.000 - - - - - - - -
45. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
46. CR381673.1 ENSDARG00000098337 7 1 - - - 1.000 - - - - -
47. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - 1.000 - - -
48. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
49. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
50. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
51. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
52. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
53. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
54. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
55. CABZ01084323.1 ENSDARG00000104937 5 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
56. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
57. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
58. isg15 ENSDARG00000086374 8 1 1.000 - - - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
59. SH3RF3 ENSDARG00000102334 1 1 1.000 - - - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
60. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
61. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
62. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
63. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
64. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
65. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
66. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
67. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
68. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
69. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
70. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
71. GPT GPT 2 1 - - - - - - - - 1.000
72. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
73. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
74. BX571823.1 BX571823.1 2 1 - - - 1.000 - - - - -
75. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - 1.000 - - -
76. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
77. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
78. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
79. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
80. mir92a-1 20 1 1.000 - - - - - - - - microRNA 92a-1
81. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
82. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -
83. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
84. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
85. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
86. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
87. sgk494b ENSDARG00000086169 1 1 - - - 1.000 - - - - - uncharacterized serine/threonine-protein kinase SgK494b [Source:ZFIN;Acc:ZDB-GENE-120215-252]
88. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
89. tdo2b ENSDARG00000023176 8 1 1.000 - - - - - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
90. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
91. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
92. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
93. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
94. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
95. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
96. NPM2 NPM2 41 1 - - - - - - - - 1.000
97. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
98. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
99. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
100. dab1b ENSDARG00000003290 7 1 - - - - - 1.000 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]

There are 758 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA