Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rgra

Gene Name Gene ID Reads Annotation
rgra ENSDARG00000054890 848 retinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]










Genes with expression patterns similar to rgra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgra ENSDARG00000054890 848 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]
2. zgc:161979_1 zgc:161979_1 206500 3.805 - - - 0.751 0.704 0.783 0.797 0.770 -
3. creb3l3 creb3l3 1981 3.28 - - - 0.735 0.835 - 0.924 0.786 -
4. suclg2 ENSDARG00000044914 7950 3.143 - 0.845 0.722 - 0.712 - 0.864 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
5. CFI 3801 3.053 - - - 0.745 0.763 0.788 - 0.757 - complement factor I
6. znrf2a ENSDARG00000077855 1845 3.045 - - - 0.781 0.725 0.712 0.827 - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
7. apoeb ENSDARG00000040295 229165 3.029 - - - 0.754 0.746 - 0.774 0.755 - apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. apom ENSDARG00000076838 4732 3.022 - - - 0.731 0.739 - 0.848 0.704 - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
9. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 3.002 - 0.776 - - 0.729 - 0.749 0.748 - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
10. CNDP1 CNDP1 6456 2.99 - - - - 0.748 0.742 0.799 0.701 -
11. apobb apobb 258472 2.945 - - - 0.728 0.772 - 0.734 0.711 -
12. apoa1b ENSDARG00000101324 336817 2.901 - - - 0.704 0.754 0.710 - 0.733 - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
13. APOB APOB 33858 2.88 - - - 0.742 0.728 0.705 - 0.705 -
14. APOA4_1 APOA4_1 3645 2.494 - - - 0.788 0.814 - 0.892 - -
15. tspan13a ENSDARG00000068883 678 2.484 - - - - - 0.869 0.819 0.796 - tetraspanin 13a [Source:ZFIN;Acc:ZDB-GENE-040718-19]
16. SLC22A31 ENSDARG00000078882 1474 2.47 - - - - - 0.910 0.856 0.704 - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
17. rhbg ENSDARG00000009018 1131 2.456 - - - - - 0.866 0.879 0.711 - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
18. dgat2 ENSDARG00000018846 5032 2.431 - - - 0.717 0.842 - 0.872 - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
19. akap7 ENSDARG00000043843 3596 2.419 - - - 0.746 - 0.794 0.879 - - A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
20. rpia ENSDARG00000056640, ENSDARG00000110576 8288 2.389 - - - - - 0.778 0.890 0.721 - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
21. sord ENSDARG00000053405 2406 2.384 - - - 0.731 0.768 0.885 - - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
22. vtnb ENSDARG00000053831 2364 2.362 - - - 0.742 0.764 - 0.856 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
23. TMEM179 ENSDARG00000013292 3452 2.356 - - - 0.765 - 0.760 0.831 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
24. zgc:161979 zgc:161979 196746 2.353 - - - - 0.780 - 0.826 0.747 -
25. pla2g12b ENSDARG00000015662 27239 2.32 - - - 0.793 0.791 - - 0.736 - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
26. mid1ip1l ENSDARG00000018145 2789 2.32 - - - 0.719 - 0.786 0.815 - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
27. C3_2 C3_2 1084 2.319 - - 0.740 - - 0.717 0.862 - -
28. txn ENSDARG00000044125, ENSDARG00000116040 4758 2.294 - - 0.757 0.709 - - 0.828 - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
29. apoa4 apoa4 84813 2.287 - - - - - 0.711 0.797 0.779 -
30. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 2.282 - - - 0.775 - - 0.746 0.761 - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
31. cfb ENSDARG00000055278, ENSDARG00000110358 1725 2.271 - - - 0.743 - 0.769 - 0.759 - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
32. hmox1 hmox1 1391 2.27 - - - 0.707 0.759 - 0.804 - -
33. nt5c3a ENSDARG00000058597 14299 2.269 - - - 0.702 0.737 - 0.830 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
34. renbp ENSDARG00000008931 1848 2.268 - - - - 0.819 0.705 - 0.744 - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
35. glula ENSDARG00000099776 14156 2.268 - - - 0.719 0.738 - 0.811 - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
36. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 2.26 - - 0.704 - - - 0.839 0.717 - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
37. slc25a20 ENSDARG00000040401 9258 2.245 - - - 0.758 - 0.726 - 0.761 - solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
38. lamp2 ENSDARG00000014914 5035 2.224 - - 0.726 - 0.716 - 0.782 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
39. apoa2 ENSDARG00000015866 297380 2.218 - - - - 0.756 - 0.746 0.716 - apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
40. f2 ENSDARG00000036041 3129 2.199 - - - - 0.767 - 0.700 0.732 - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
41. hao1 ENSDARG00000024160 6104 2.173 - - - 0.718 0.720 - - 0.735 - hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
42. apoc2 ENSDARG00000092155 38149 2.167 - - - - 0.707 - 0.702 0.758 - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
43. f7 ENSDARG00000034862 405 1.741 - - - - - 0.796 0.945 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
44. neu1 ENSDARG00000008832 2848 1.738 - - - - - 0.899 0.839 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
45. C3_1 C3_1 637 1.734 - - - - - 0.856 0.878 - -
46. hao2 ENSDARG00000027992, ENSDARG00000116498 615 1.724 - - - - - 0.862 0.862 - - hydroxyacid oxidase 2 (long chain) [Source:ZFIN;Acc:ZDB-GENE-040426-1239]
47. zgc:56530 zgc:56530 6300 1.721 - 0.957 - - - - 0.764 - -
48. CR735107.2 CR735107.2 476 1.713 0.875 - - - - 0.838 - - -
49. irg1l ENSDARG00000062788 503 1.708 0.785 - - - - 0.923 - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
50. aqp12 ENSDARG00000043279 1881 1.699 - - - - - 0.792 0.907 - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
51. BX649281.3 BX649281.3 808 1.697 - - - - - 0.917 0.780 - -
52. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 1.695 - - - - - 0.884 0.811 - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
53. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.675 - - - 0.765 - - 0.910 - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
54. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.675 - - - - 0.785 - 0.890 - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
55. slc48a1b ENSDARG00000026109 1427 1.672 - - - - - 0.912 0.760 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
56. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.669 - - - - - 0.854 0.815 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
57. ctsla ENSDARG00000007836 67814 1.667 - - - - 0.773 - 0.894 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
58. APOA4 APOA4 20822 1.637 - - - - 0.795 - 0.842 - -
59. atpv0e1 atpv0e1 1957 1.637 - - - - - 0.909 0.728 - -
60. PARD3B_1 PARD3B_1 1735 1.63 - 0.862 - - - - 0.768 - -
61. igfbp2b ENSDARG00000031422 679 1.63 - - - - - 0.829 0.801 - - insulin-like growth factor binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-090107-3]
62. si:ch211-251f6.6 ENSDARG00000053448 323 1.63 - - - - - 0.830 0.800 - - si:ch211-251f6.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3219]
63. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.626 - - - 0.715 - - 0.911 - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
64. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.626 - - - - - 0.843 0.783 - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
65. cask cask 3384 1.623 - - - 0.775 - 0.848 - - -
66. zgc:136410 ENSDARG00000102241 8433 1.618 - - - 0.766 - - 0.852 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
67. atp2b1a ENSDARG00000012684 4673 1.613 - - - - - 0.833 0.780 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
68. sid4 sid4 1358 1.613 - - - 0.735 - - 0.878 - -
69. nme3 ENSDARG00000100990 3889 1.612 - - - - - 0.725 0.887 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
70. acsl5 ENSDARG00000075931 880 1.61 - - - - 0.748 0.862 - - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
71. MPC2 ENSDARG00000024478 4194 1.608 - - - 0.721 - - 0.887 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
72. epas1a ENSDARG00000008697 3225 1.606 - - - - - 0.842 0.764 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
73. cldnf ENSDARG00000043133 1006 1.604 - 0.784 - - - - 0.820 - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
74. pim2 ENSDARG00000059001 1893 1.599 - 0.874 - - - 0.725 - - - Pim-2 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-000831-6]
75. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 1.599 - - - - 0.749 - 0.850 - - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
76. adipor2 ENSDARG00000101849 3156 1.597 - 0.824 - - - - 0.773 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
77. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.592 - - - - - 0.829 0.763 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
78. abat ENSDARG00000006031 2143 1.59 - 0.743 - - - - 0.847 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
79. SHKBP1 ENSDARG00000105050 1139 1.59 - - - - - 0.845 0.745 - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
80. sidt2 ENSDARG00000045976 1997 1.587 - - - - - 0.720 0.867 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
81. ctsh ENSDARG00000041108 2873 1.586 - - - 0.747 - - 0.839 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
82. gbp1 ENSDARG00000038668 520 1.585 - - - - 0.703 0.882 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
83. prps1a ENSDARG00000015524 23738 1.583 - - - - 0.751 - 0.832 - - phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
84. angptl3 ENSDARG00000044365 574 1.581 - - - - - 0.835 0.746 - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
85. C6H17orf67 C6H17orf67 687 1.575 - - - - - - 0.875 0.700 -
86. uroc1 ENSDARG00000070394 357 1.574 - - - - - 0.760 0.814 - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
87. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.572 - - - - - - 0.864 0.708 - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
88. ucp2 ENSDARG00000043154 2921 1.571 - - - 0.736 - - 0.835 - - uncoupling protein 2 [Source:ZFIN;Acc:ZDB-GENE-990708-8]
89. gpx4a ENSDARG00000068478 10991 1.57 - - - - - - 0.815 0.755 - glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
90. fahd2a ENSDARG00000103759 9581 1.568 - - - - - - 0.820 0.748 - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
91. sb:cb37 ENSDARG00000041645 2018 1.563 - - - 0.720 - - 0.843 - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
92. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.562 - - - 0.703 - 0.859 - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
93. c3a c3a 6690 1.556 - - - 0.722 - - 0.834 - -
94. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 1.55 - - - 0.741 - 0.809 - - - kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
95. capn2a ENSDARG00000091699 5924 1.549 - 0.721 - - - - 0.828 - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
96. APOB_1 APOB_1 2217 1.548 - - - - - 0.749 - 0.799 -
97. zgc:158868 ENSDARG00000069379, ENSDARG00000116578 121 1.548 0.761 - - - - 0.787 - - - zgc:158868 [Source:ZFIN;Acc:ZDB-GENE-070112-892]
98. cyp2aa4 ENSDARG00000098803 1762 1.548 - - - 0.716 - - 0.832 - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
99. vtna ENSDARG00000055388 2635 1.547 - - - - - 0.789 - 0.758 - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
100. acsl4a ENSDARG00000004078 4241 1.545 - - - - - 0.748 0.797 - - acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]

There are 1017 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA