Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rgp1

Gene Name Gene ID Reads Annotation
rgp1 ENSDARG00000006545 790 GP1 homolog, RAB6A GEF complex partner 1 [Source:ZFIN;Acc:ZDB-GENE-040718-352]










Genes with expression patterns similar to rgp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgp1 ENSDARG00000006545 790 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GP1 homolog, RAB6A GEF complex partner 1 [Source:ZFIN;Acc:ZDB-GENE-040718-352]
2. dachd ENSDARG00000069440 271 1.773 0.879 - - - - - - 0.894 - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
3. pitpnaa ENSDARG00000039490 1096 1.697 - - - - - - 0.836 0.861 - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
4. MAP7 MAP7 98 1.6 - - - - - 0.736 - 0.864 -
5. VDAC3 ENSDARG00000003695 34 1.593 - - - - - 0.727 - 0.866 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
6. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.591 - - - - - - 0.817 0.774 - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
7. pi4kb ENSDARG00000040111, ENSDARG00000111175 2132 1.585 - - - - - - 0.702 0.883 - phosphatidylinositol 4-kinase, catalytic, beta [Source:ZFIN;Acc:ZDB-GENE-061013-96]
8. commd1 ENSDARG00000031203 340 1.584 - - - - - - 0.709 0.875 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
9. CABZ01088061.1 CABZ01088061.1 695 1.543 - - - - - 0.812 0.731 - -
10. itpkca ENSDARG00000002994 710 1.538 - - - - - - 0.735 0.803 - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
11. si:dkey-48n15.2 si:dkey-48n15.2 297 1.524 0.709 - - - - 0.815 - - -
12. C15H11orf57 C15H11orf57 860 1.473 0.732 - - - - - 0.741 - -
13. HDAC5 ENSDARG00000075139 1287 1.472 - - - - - 0.712 0.760 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
14. ahr2 ENSDARG00000021833 762 1.456 0.718 - - - - - 0.738 - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
15. bcl6ab ENSDARG00000069295 656 1.454 0.737 - - - - - 0.717 - - B-cell CLL/lymphoma 6a, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-7523]
16. akt2 ENSDARG00000011219 647 0.912 - - - - - - - 0.912 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
17. ddx56 ENSDARG00000020913 1070 0.907 - - - - - - - 0.907 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
18. znf362 znf362 869 0.906 - - - - - - - 0.906 -
19. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.905 - - - - - - - 0.905 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
20. si:ch73-387e10.3 si:ch73-387e10.3 517 0.904 - - - - - - - 0.904 -
21. mcmbp ENSDARG00000055314 731 0.904 - - - - - - - 0.904 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
22. NHSL2 ENSDARG00000089066 374 0.897 - - - - - - - 0.897 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
23. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.897 - - - - - - - 0.897 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
24. zgc:174877 ENSDARG00000079278 143 0.896 - - - - - - - 0.896 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
25. dclk1a ENSDARG00000018856 177 0.895 - - - - - - - 0.895 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
26. CABZ01080599.2 CABZ01080599.2 192 0.894 - - - - - - - 0.894 -
27. pex16 ENSDARG00000058202 486 0.894 - - - - - - - 0.894 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
28. clybl ENSDARG00000029729 690 0.892 - - - - - - - 0.892 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
29. CR381544.1 ENSDARG00000088187 821 0.891 - - - - - - - 0.891 -
30. ncoa6 ENSDARG00000071272 759 0.888 - - - - - - - 0.888 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
31. rprd2b ENSDARG00000074676 809 0.888 - - - - - - - 0.888 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
32. pdxka ENSDARG00000088959 217 0.887 - - - - - - - 0.887 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
33. pigu ENSDARG00000075530 348 0.887 - - - - - 0.887 - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
34. rhbdd2 ENSDARG00000092463 937 0.886 - - - - - - - 0.886 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
35. C18H11orf58 C18H11orf58 1293 0.886 - - - - - - - 0.886 -
36. b3galtla b3galtla 111 0.885 - - - - - - - 0.885 -
37. nrxn2b ENSDARG00000063150 343 0.884 - - - - - - - 0.884 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
38. mea1 ENSDARG00000039820 589 0.884 - - - - - - - 0.884 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
39. slc44a5b ENSDARG00000057419 534 0.884 - - - - - - - 0.884 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
40. reep3l reep3l 608 0.884 - - - - - - - 0.884 -
41. C20H1orf112 C20H1orf112 316 0.883 - - - - - - - 0.883 -
42. ctps1a ENSDARG00000030700 3868 0.883 - - - - - - - 0.883 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
43. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.882 - - - - - - - 0.882 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
44. hn1a hn1a 115 0.882 - - - - - - - 0.882 -
45. CABZ01045230.1 CABZ01045230.1 158 0.882 - - - - - - - 0.882 -
46. orc6 ENSDARG00000075682 1382 0.882 - - - - - - - 0.882 - origin recognition complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2976]
47. si:ch73-73d17.3 si:ch73-73d17.3 925 0.881 - - - - - - - 0.881 -
48. git2a ENSDARG00000061915 884 0.881 - - - - - - - 0.881 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
49. ANGPT4 ENSDARG00000076787 140 0.88 - - - - - - - 0.880 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
50. surf6 ENSDARG00000035427 1695 0.879 - - - - - - - 0.879 - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
51. pus7 ENSDARG00000031774 195 0.878 - - - - - - - 0.878 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
52. SHANK1 ENSDARG00000060539 102 0.878 - - - - - - - 0.878 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
53. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 0.877 - - - - - - - 0.877 - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
54. nrp2b ENSDARG00000038446 783 0.877 - - - - - - - 0.877 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
55. fam173b ENSDARG00000033451 513 0.877 - - - - - - - 0.877 - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
56. slc6a6a ENSDARG00000012534 183 0.875 - - - - - - - 0.875 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
57. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.875 - - - - - - - 0.875 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
58. si:dkey-17e6.2 si:dkey-17e6.2 72 0.875 - - - - - - - 0.875 -
59. usp4 ENSDARG00000014770 1684 0.874 - - - - - - - 0.874 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
60. BX511021.1 ENSDARG00000073936 647 0.874 - - - - - - - 0.874 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
61. timm10 ENSDARG00000069116 4459 0.874 - - - - - - - 0.874 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
62. ptpdc1 ptpdc1 281 0.873 - - - - - - - 0.873 -
63. pnn ENSDARG00000015851 1269 0.873 - - - - - - - 0.873 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
64. ctdspla ENSDARG00000071673 1447 0.873 - - - - - - - 0.873 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
65. TTF1_4 TTF1_4 504 0.872 - - - - - - - 0.872 -
66. KBTBD13_1 KBTBD13_1 116 0.872 - - - - - - - 0.872 -
67. ralgps2 ENSDARG00000026519 1610 0.872 - - - - - - - 0.872 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
68. si:dkey-157e10.7 si:dkey-157e10.7 105 0.872 - - - - - - - 0.872 -
69. ENSDARG00000029117 ENSDARG00000029117 80 0.871 - - - - - - - 0.871 -
70. si:dkey-114c15.7 237 0.871 - - - - - - - 0.871 - si:dkey-114c15.7
71. trappc3 ENSDARG00000045364 1021 0.871 - - - - - - - 0.871 - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
72. camk2d1 ENSDARG00000043010 669 0.87 - - - - - - - 0.870 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
73. GDPD4_1 GDPD4_1 190 0.87 - - - - - - - 0.870 -
74. zgc:174688 zgc:174688 170 0.869 - - - - - - - 0.869 -
75. rpgra ENSDARG00000056617 77 0.869 - - - - - - - 0.869 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
76. nudt17 ENSDARG00000008014 479 0.868 0.868 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
77. ankdd1b ENSDARG00000025866 51 0.868 - - - - - - - 0.868 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
78. SRPK2 446 0.868 - - - - - - - 0.868 - SRSF protein kinase 2, transcript variant X4
79. CIT CIT 212 0.868 - - - - - - - 0.868 -
80. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.867 - - - - - - - 0.867 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
81. adora1 adora1 149 0.867 - - - - - - - 0.867 -
82. RBM26 ENSDARG00000104130 1012 0.867 - - - - - - - 0.867 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
83. aatkb ENSDARG00000104442 392 0.867 - - - - - - - 0.867 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
84. HYKK HYKK 261 0.866 - - - - - - - 0.866 -
85. C8H17orf59 C8H17orf59 494 0.866 - - - - - - - 0.866 -
86. jam3a ENSDARG00000114589 630 0.866 - - - - - - - 0.866 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
87. mir130b 180 0.866 - - - - - - - 0.866 - microRNA 130b
88. zgc:162948 ENSDARG00000053695 301 0.866 - - - - - - - 0.866 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
89. si:ch73-167f18.3 si:ch73-167f18.3 78 0.865 - - - - - - - 0.865 -
90. unc45a ENSDARG00000103643 622 0.865 - - - - - 0.865 - - - unc-45 myosin chaperone A [Source:ZFIN;Acc:ZDB-GENE-050417-158]
91. si:dkey-100h21.2 si:dkey-100h21.2 30 0.864 - - - - - - - 0.864 -
92. IKZF4 ENSDARG00000037068 36 0.864 - - - - - - - 0.864 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
93. spef2 ENSDARG00000098330 59 0.864 - - - - - - - 0.864 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
94. tarsl2 ENSDARG00000092774 505 0.864 - - - - - - - 0.864 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
95. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.864 - - - - - - - 0.864 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
96. gna13b ENSDARG00000037924 1963 0.864 - - - - - - - 0.864 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
97. pde6b ENSDARG00000011671 44 0.864 - - - - - - - 0.864 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
98. ano1 ENSDARG00000102335 445 0.864 - - - - - 0.864 - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
99. hoxa4a 37 0.863 - - - - - - - 0.863 - homeobox A4a, transcript variant X4
100. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.863 - - - - - - - 0.863 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]

There are 749 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA