Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rgmd

Gene Name Gene ID Reads Annotation
rgmd ENSDARG00000034013, ENSDARG00000111872 4752 RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]










Genes with expression patterns similar to rgmd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
2. tmem47 ENSDARG00000057322 4691 3.411 0.823 0.729 - - - 0.911 0.948 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
3. tmsb ENSDARG00000054911 6411 3.259 0.792 0.706 - - - 0.841 0.920 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
4. CU928222.1 ENSDARG00000097436 1662 3.153 0.791 0.731 - - - 0.827 0.804 - -
5. wu:fb17g07 wu:fb17g07 10567 3.149 0.752 0.820 - - - 0.805 0.772 - -
6. nrarpb ENSDARG00000018958 6225 3.078 0.777 0.772 - - - 0.764 0.765 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
7. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.566 0.854 - - - - 0.779 0.933 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
8. camk2d2 ENSDARG00000014273 2840 2.528 0.828 - - - - 0.813 0.887 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
9. cldn5a ENSDARG00000043716 3865 2.482 0.777 - - - - 0.887 0.818 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
10. epha3l epha3l 1441 2.457 0.853 0.732 - - - - 0.872 - -
11. ank3b ENSDARG00000077582, ENSDARG00000110151 831 2.449 - 0.815 - - - 0.855 0.779 - - ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]
12. ank2b ENSDARG00000043313 3065 2.438 0.736 - - - - 0.791 0.911 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
13. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.427 0.808 0.719 - - - - 0.900 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
14. chrna1 ENSDARG00000009021 2931 2.424 - 0.777 - - - 0.763 0.884 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
15. vim ENSDARG00000010008 3551 2.42 0.848 - - - - 0.763 0.809 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
16. tspan5a ENSDARG00000086033 1865 2.402 0.744 - - - - 0.784 0.874 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
17. NRAP ENSDARG00000009341 3565 2.398 0.714 - - - - 0.817 0.867 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
18. klf7a ENSDARG00000073857 1226 2.383 - 0.741 - - - 0.853 0.789 - - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
19. sms ENSDARG00000008155 1192 2.365 - 0.848 - - - 0.802 0.715 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
20. desi2 ENSDARG00000004460 1593 2.361 - 0.831 - - - 0.730 0.800 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
21. txnipb ENSDARG00000070000 2365 2.359 - 0.749 - - - 0.728 0.882 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
22. flncb ENSDARG00000018820 5595 2.356 0.732 - - - - 0.732 0.892 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
23. myt1b ENSDARG00000102879 5411 2.346 0.799 - - - - 0.801 0.746 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
24. PTPLA PTPLA 4044 2.339 0.708 - - - - 0.770 0.861 - -
25. EFCC1 ENSDARG00000077826 1359 2.334 0.857 - - - - 0.770 0.707 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
26. cap2 ENSDARG00000104478 3266 2.334 0.768 0.752 - - - - 0.814 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
27. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.334 0.751 - - - - 0.774 0.809 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
28. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.334 - 0.711 - - - 0.790 0.833 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
29. ALDH1L2 ENSDARG00000070230 2550 2.327 0.710 - - - - 0.826 0.791 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
30. lin7a ENSDARG00000013414 1589 2.327 - 0.761 - - - 0.730 0.836 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
31. TNS1 TNS1 628 2.324 0.783 - - - - 0.718 0.823 - -
32. klhl40a ENSDARG00000039052 2537 2.316 - 0.748 - - - 0.735 0.833 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
33. smad3b ENSDARG00000010207 951 2.314 - 0.775 - - - 0.810 0.729 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
34. si:ch73-21g5.7 ENSDARG00000093156 9412 2.313 0.850 - - - - 0.745 0.718 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
35. myoz2a ENSDARG00000012311 1373 2.31 0.718 0.779 - - - - 0.813 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
36. dnmt3ab ENSDARG00000015566 1206 2.305 0.796 0.712 - - - - 0.797 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
37. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.305 0.709 0.780 - - - - 0.816 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
38. hmgb3a ENSDARG00000056725 15668 2.298 0.756 - - - - 0.801 0.741 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
39. nova2 ENSDARG00000017673 7685 2.286 0.807 - - - - 0.728 0.751 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
40. gad2 ENSDARG00000015537 724 2.282 0.704 - - - - 0.830 0.748 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
41. myf6 ENSDARG00000029830 1911 2.279 0.727 0.779 - - - - 0.773 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
42. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 2.279 0.702 - - - - 0.842 0.735 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
43. apex1 ENSDARG00000045843 6345 2.278 0.776 0.748 - - - - 0.754 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
44. BX294434.1 ENSDARG00000061272 6493 2.278 0.719 0.714 - - - - 0.845 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
45. cacng1 cacng1 3118 2.274 - 0.758 - - - 0.778 0.738 - -
46. tnnt2d ENSDARG00000002988 7590 2.274 - 0.716 - - - 0.722 0.836 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
47. pcdh1gc5 ENSDARG00000104826 10052 2.269 0.781 - - - - 0.718 0.770 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
48. slc18a3a ENSDARG00000006356 1285 2.263 0.813 - - - - 0.742 0.708 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
49. skib ENSDARG00000008034 6518 2.262 - 0.734 - - - 0.723 0.805 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
50. map7d2a ENSDARG00000068480 513 2.26 0.746 - - - - 0.767 0.747 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
51. fzd3a ENSDARG00000021664 1958 2.258 0.826 0.708 - - - - 0.724 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
52. slc1a3a ENSDARG00000104431 9888 2.251 - 0.709 - - - 0.727 0.815 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
53. atp1b4 ENSDARG00000053262 1337 2.249 0.711 - - - - 0.726 0.812 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
54. nkx6.2 ENSDARG00000104735 5081 2.247 0.788 - - - - 0.706 0.753 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
55. rtn1b ENSDARG00000021143 1682 2.245 0.702 - - - - 0.710 0.833 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
56. TUBA1A ENSDARG00000001889 25294 2.244 0.706 - - - - 0.773 0.765 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
57. DNAJA4 ENSDARG00000051762 5657 2.243 - 0.712 - - - 0.722 0.809 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
58. hmgb1b ENSDARG00000030479 10398 2.239 0.778 - - - - 0.752 0.709 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
59. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.234 0.787 - - - - 0.741 0.706 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
60. mybpc2b ENSDARG00000021265 9618 2.221 0.728 0.706 - - - - 0.787 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
61. hmp19 2554 2.218 0.774 - - - - 0.723 0.721 - - HMP19 protein
62. pou3f3a ENSDARG00000042032 2835 2.217 0.778 - - - - 0.723 0.716 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
63. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.207 - 0.707 - - - 0.784 0.716 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
64. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.199 0.710 - - - - 0.732 0.757 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
65. chat chat 463 2.185 0.728 - - - - 0.748 0.709 - -
66. gpr144 gpr144 479 2.177 0.761 - - - - 0.712 0.704 - -
67. atp6v0cb ENSDARG00000036577 3472 2.175 0.706 - - - - 0.720 0.749 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
68. ek1 ENSDARG00000020080 742 2.158 0.716 - - - - 0.703 0.739 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
69. tmpob ENSDARG00000022978 8121 2.154 0.703 - - - - 0.718 0.733 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
70. prmt1 ENSDARG00000010246 11311 2.151 0.711 0.728 - - - 0.712 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
71. AGO1 ENSDARG00000092644 4521 2.149 0.731 - - - - 0.704 0.714 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
72. arnt2 ENSDARG00000103697 5731 2.149 - - 0.706 - - 0.717 0.726 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
73. cdkn1c cdkn1c 17427 1.789 0.841 - - - - - 0.948 - -
74. PRIMA1 PRIMA1 459 1.761 - - - - - 0.873 0.888 - -
75. pebp1 ENSDARG00000042069 6651 1.751 0.833 - - - - - 0.918 - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
76. hapln1a ENSDARG00000089769 12334 1.745 - 0.844 - - - - 0.901 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
77. eng1b eng1b 2544 1.734 - - - - - 0.900 0.834 - -
78. GPRC5B GPRC5B 897 1.733 0.816 - - - - - 0.917 - -
79. tprg1l ENSDARG00000068149 1605 1.713 - - - - - 0.847 0.866 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
80. xpr1 xpr1 840 1.713 - - - - - 0.812 0.901 - -
81. atp1b3b ENSDARG00000042837 5163 1.712 - - - - - 0.854 0.858 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
82. NAT16 ENSDARG00000086222 4682 1.706 - - - - - 0.885 0.821 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
83. clstn1 ENSDARG00000031720 5286 1.701 0.833 - - - - - 0.868 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
84. nexn ENSDARG00000057317 10972 1.7 - - - - - 0.833 0.867 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
85. scn4ba ENSDARG00000099031 1634 1.7 - - - - - 0.869 0.831 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
86. MYOM3 2720 1.699 - 0.874 - - - - 0.825 - - myomesin 3, transcript variant X2
87. myom1a ENSDARG00000061249 10230 1.698 - - - - - 0.820 0.878 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
88. tmem182 tmem182 12589 1.693 - - - - - 0.851 0.842 - -
89. klhl41b ENSDARG00000006757 10762 1.691 - - - - - 0.834 0.857 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
90. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.688 - 0.795 - - - - 0.893 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
91. MYOT ENSDARG00000076312 1791 1.687 - 0.816 - - - - 0.871 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
92. pvrl3l pvrl3l 943 1.684 - - - - - 0.832 0.852 - -
93. lsm6 ENSDARG00000036995 4377 1.679 0.806 - - - - - 0.873 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
94. hdac9b ENSDARG00000056642 1148 1.676 - 0.860 - - - - 0.816 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
95. trim55b ENSDARG00000058158 586 1.676 - 0.841 - - - - 0.835 - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
96. CABZ01088330.1 CABZ01088330.1 679 1.672 - - - - - 0.851 0.821 - -
97. asb2a asb2a 845 1.669 - 0.810 - - - - 0.859 - -
98. hspb9 ENSDARG00000078674 2755 1.668 - - - - - 0.746 0.922 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
99. map2 ENSDARG00000055052 6062 1.668 0.858 - - - - - 0.810 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
100. mybphb ENSDARG00000003081 5208 1.665 - 0.754 - - - - 0.911 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]

There are 1998 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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