Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rgma

Gene Name Gene ID Reads Annotation
rgma ENSDARG00000012248 2238 repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]










Genes with expression patterns similar to rgma

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgma ENSDARG00000012248 2238 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
2. cth ENSDARG00000074301 3860 1.777 - 0.777 - - - - 1.000 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
3. dhx9 ENSDARG00000079725 1241 1.771 - - - - 0.945 0.826 - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
4. BX294434.1 ENSDARG00000061272 6493 1.748 - 0.816 - - 0.932 - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
5. EIF4G1_1 EIF4G1_1 3721 1.728 - 0.728 - - - - 1.000 - -
6. srsf5a ENSDARG00000029818 15600 1.727 - - - - 0.737 - 0.990 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
7. hspg2 ENSDARG00000076564 3440 1.723 - 0.777 - - 0.946 - - - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
8. PACS1 PACS1 2061 1.701 - 0.761 - - 0.940 - - - -
9. C8H1orf174 C8H1orf174 372 1.666 - 0.724 - - 0.942 - - - -
10. ctnnd2b ENSDARG00000003779 964 1.656 - 0.723 - - 0.933 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
11. pwp2h ENSDARG00000037109 1395 1.61 - 0.709 - - 0.901 - - - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
12. smarcd3a ENSDARG00000038786 2894 1.542 - 0.708 - - - 0.834 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
13. tgm1l1 ENSDARG00000102106 1437 1.524 0.752 0.772 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
14. sulf1 ENSDARG00000038428 2748 1.524 - 0.820 - - - 0.704 - - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
15. bag3 ENSDARG00000039486 1087 1.51 - 0.788 - - - 0.722 - - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
16. mtdhb ENSDARG00000004939 1225 1.504 - 0.755 - - - 0.749 - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
17. LIMD1_1 LIMD1_1 348 1.487 - 0.704 - - - 0.783 - - -
18. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.481 - 0.713 - - - - 0.768 - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
19. cacng1 cacng1 3118 1.477 - 0.757 - - - 0.720 - - -
20. wu:fb17g07 wu:fb17g07 10567 1.473 - 0.750 - - - 0.723 - - -
21. lgals2a ENSDARG00000054942 888 1.47 - 0.756 - - - 0.714 - - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
22. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.464 - 0.720 - - - 0.744 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
23. txlnbb ENSDARG00000076241 6396 1.46 - 0.718 - - - 0.742 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
24. CBFA2T3 ENSDARG00000079012 6799 1.457 - - - - 0.756 0.701 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
25. timm8b ENSDARG00000055708 7291 1.44 - 0.717 - - 0.723 - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
26. trim101 ENSDARG00000018264 827 1.434 - 0.734 - - - 0.700 - - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
27. C12H10orf71 C12H10orf71 595 1.429 - 0.724 - - - 0.705 - - -
28. AL772300.3 AL772300.3 1752 1 - - - - - - 1.000 - -
29. serpine2 ENSDARG00000029353 2274 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
30. aspg ENSDARG00000052942 1406 1 - - - - - - 1.000 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
31. rbm39a ENSDARG00000011613 4520 1 - - - - - - 1.000 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
32. CT955967.1 ENSDARG00000099956 2885 1 - - - - - - 1.000 - -
33. stx12 ENSDARG00000098813 2576 1 - - - - - - 1.000 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
34. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1 - - - - - - 1.000 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
35. wu:fj08f03 wu:fj08f03 1337 1 - - - - - - 1.000 - -
36. parp1 ENSDARG00000019529 6787 1 - - - - - - 1.000 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
37. loxl1 ENSDARG00000054451 2485 1 - - - - - - 1.000 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
38. cep97 ENSDARG00000102407 1154 1 - - - - - - 1.000 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
39. phf2 ENSDARG00000018691 3341 1 - - - - - - 1.000 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
40. TUBGCP6 1991 1 - - - - - - 1.000 - - tubulin, gamma complex associated protein 6
41. chd2 ENSDARG00000060687 3832 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
42. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 1 - - - - - - 1.000 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
43. loxl2a ENSDARG00000044010 1906 1 - - - - - - 1.000 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
44. PCDH9 ENSDARG00000063264 1309 1 - - - - - - 1.000 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
45. efcab7 ENSDARG00000020279 1030 1 - - - - - - 1.000 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
46. slc16a12b ENSDARG00000089885 3744 0.999 - - - - - - 0.999 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
47. sh3gl3a ENSDARG00000013360 3602 0.999 - - - - - - 0.999 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
48. cmip ENSDARG00000062933 4521 0.999 - - - - - - 0.999 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
49. BX548078.1 ENSDARG00000093780 1325 0.999 - - - - - - 0.999 - -
50. hoxb8a ENSDARG00000056027 6340 0.999 - - - - - - 0.999 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
51. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.999 - - - - - - 0.999 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
52. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
53. ndufa7 ENSDARG00000036684 6051 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
54. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
55. bin2a ENSDARG00000003219 1369 0.999 - - - - - - 0.999 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
56. FP102272.1 FP102272.1 9473 0.999 - - - - - - 0.999 - -
57. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.998 - - - - - - 0.998 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
58. psmd6 ENSDARG00000070674 4675 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
59. zgc:101000 zgc:101000 9041 0.998 - - - - - - 0.998 - -
60. rab5aa ENSDARG00000018602 8947 0.998 - - - - - - 0.998 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
61. rab1ba ENSDARG00000058044 5080 0.998 - - - - - - 0.998 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
62. cx43.4 ENSDARG00000007099 16369 0.997 - - - - - - 0.997 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
63. CU463857.1 CU463857.1 5541 0.997 - - - - - - 0.997 - -
64. eif3c ENSDARG00000016443 18003 0.997 - - - - - - 0.997 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
65. rnaseka ENSDARG00000069461 10304 0.996 - - - - - - 0.996 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
66. lamc1 ENSDARG00000036279 11025 0.996 - - - - - - 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
67. lgals3l lgals3l 3833 0.996 - - - - - - 0.996 - -
68. rbx1 ENSDARG00000038030 14611 0.994 - - - - - - 0.994 - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
69. nr2f1a ENSDARG00000052695 5037 0.994 - - - - - - 0.994 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
70. hmgcl ENSDARG00000021220 2468 0.994 - - - - - - 0.994 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
71. mat2aa ENSDARG00000040334 10769 0.994 - - - - - - 0.994 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
72. qkia ENSDARG00000097478 18572 0.993 - - - - - - 0.993 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
73. snd1 ENSDARG00000006766 12906 0.992 - - - - - - 0.992 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
74. tomm20b ENSDARG00000103566 12436 0.991 - - - - - - 0.991 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
75. oaz1a ENSDARG00000071403 21112 0.991 - - - - - - 0.991 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
76. IDH2 ENSDARG00000003795 18659 0.989 - - - - - - 0.989 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
77. ENSDARG00000070355 ENSDARG00000070355 8316 0.985 - - - - - - 0.985 - -
78. suclg1 ENSDARG00000052712 17570 0.985 - - - - - - 0.985 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
79. tubb4b ENSDARG00000002344 30333 0.983 - - - - - - 0.983 - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
80. wnk1b ENSDARG00000039392 3587 0.978 - - - - - - 0.978 - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
81. ywhaba ENSDARG00000013078 42000 0.976 - - - - - - 0.976 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
82. ldha ENSDARG00000101251 10868 0.972 - - - - - - 0.972 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
83. khdrbs1a ENSDARG00000052856 53666 0.964 - - - - - - 0.964 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
84. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.964 - - - - - - 0.964 - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
85. CABZ01003826.1_1 CABZ01003826.1_1 1154 0.957 - - - - 0.957 - - - -
86. ikbkb ENSDARG00000079123 498 0.955 - - - - 0.955 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
87. nqo1 ENSDARG00000010250 6430 0.955 - - - - - - 0.955 - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
88. rybpa ENSDARG00000037773 904 0.955 - - - - 0.955 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
89. espn ENSDARG00000076414 343 0.953 - - - - 0.953 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
90. arhgap29b ENSDARG00000017748 812 0.952 - - - - 0.952 - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
91. alpl ENSDARG00000015546 334 0.95 - - - - 0.950 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
92. COLGALT1 ENSDARG00000073974 5069 0.95 - - - - 0.950 - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
93. invs ENSDARG00000002213 261 0.948 - - - - 0.948 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
94. fzd8a ENSDARG00000045444 802 0.947 - - - - 0.947 - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
95. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.947 - - - - 0.947 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
96. slc39a13 ENSDARG00000000442 1367 0.947 - - - - 0.947 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
97. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 0.946 - - - - 0.946 - - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
98. cnpy1 ENSDARG00000003757 1132 0.946 - - - - 0.946 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
99. kat2a ENSDARG00000104734 802 0.946 - - - - 0.946 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
100. tmem135 ENSDARG00000069157 918 0.945 - - - - 0.945 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]

There are 731 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA