Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rgcc

Gene Name Gene ID Reads Annotation
rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]










Genes with expression patterns similar to rgcc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
2. pabpc1b ENSDARG00000021140 5729 2.15 - - - - 0.709 - 0.706 - 0.735 poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
3. exoc3l4 ENSDARG00000058180 923 1.641 - 0.916 - - - 0.725 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
4. rab33ba ENSDARG00000052290 914 1.617 - 0.839 - - - - 0.778 - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
5. dcun1d2 dcun1d2 1721 1.578 - 0.858 - - - - 0.720 - -
6. nfkbiab ENSDARG00000007693 1345 1.551 - 0.833 - - - - 0.718 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
7. gnpnat1 ENSDARG00000039892 709 1.536 - 0.738 - - - - 0.798 - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
8. esd ENSDARG00000019496 3192 1.536 0.754 - - - - 0.782 - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
9. ammecr1 ENSDARG00000012892 14475 1.525 - - - - - 0.768 0.757 - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
10. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.519 0.743 - - - - - 0.776 - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
11. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 1.512 - 0.719 - - - - 0.793 - - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
12. bcat2 ENSDARG00000054849 4317 1.501 - 0.710 - - - - 0.791 - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
13. lamp1 1017 1.497 - 0.780 - - - 0.717 - - - lysosomal-associated membrane protein 1
14. mllt10 ENSDARG00000045401 7557 1.492 - - - - - 0.758 0.734 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
15. zgc:110626 ENSDARG00000053159 1124 1.492 - - - - - 0.766 0.726 - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
16. pdzd2 ENSDARG00000059801, ENSDARG00000109983 1634 1.491 0.767 0.724 - - - - - - - PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-297]
17. eps8l1 1598 1.487 0.765 0.722 - - - - - - - eps8-like1, transcript variant X3
18. selt1b 1396 1.479 - 0.757 - - - 0.722 - - - selenoprotein T, 1b
19. atpif1b 8625 1.456 - - - - - 0.736 0.720 - - ATPase inhibitory factor 1b
20. bola1 ENSDARG00000039915 658 1.449 - 0.723 - - - - 0.726 - - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
21. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.434 - - - - - 0.710 0.724 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
22. atp1b3b ENSDARG00000042837 5163 1.422 - - - - - 0.701 - - 0.721 ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
23. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.952 - 0.952 - - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
24. usp12a ENSDARG00000078109 490 0.939 - 0.939 - - - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
25. tmem8a ENSDARG00000032795 677 0.938 - 0.938 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
26. tmem50a ENSDARG00000015757 3244 0.937 - 0.937 - - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
27. afap1 ENSDARG00000055284 730 0.934 - 0.934 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
28. elovl6l ENSDARG00000038639 1184 0.931 - 0.931 - - - - - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
29. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 0.928 - 0.928 - - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
30. c1d ENSDARG00000021112 2839 0.928 - 0.928 - - - - - - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
31. zgc:136851 zgc:136851 315 0.927 - 0.927 - - - - - - -
32. snoR38 snoR38 1068 0.925 - 0.925 - - - - - - -
33. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.925 - 0.925 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
34. rab11al ENSDARG00000014340 2116 0.924 - 0.924 - - - - - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
35. si:dkey-67c22.2 ENSDARG00000055389 6410 0.921 - 0.921 - - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
36. emc4 ENSDARG00000039268 553 0.919 - 0.919 - - - - - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
37. si:ch73-18b11.2 ENSDARG00000094978 148 0.918 - 0.918 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
38. trpm4 trpm4 501 0.918 - 0.918 - - - - - - -
39. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.917 - 0.917 - - - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
40. ms4a17a.9 ENSDARG00000094854 933 0.916 - 0.916 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
41. mfsd11 ENSDARG00000102828 1043 0.916 - 0.916 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
42. ptbp2a ENSDARG00000101947 1921 0.915 - 0.915 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
43. TMEM71 TMEM71 696 0.915 - 0.915 - - - - - - -
44. csad ENSDARG00000026348 1461 0.915 - 0.915 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
45. slc4a1ap ENSDARG00000034160 749 0.912 - 0.912 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]
46. gga3 ENSDARG00000103667 675 0.912 - 0.912 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
47. ap3s2 ENSDARG00000039882 2149 0.911 - 0.911 - - - - - - - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
48. GEMIN7 ENSDARG00000041011 529 0.91 - 0.910 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
49. map7d1b ENSDARG00000104701 1655 0.91 - 0.910 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
50. jkamp ENSDARG00000028581 893 0.91 - 0.910 - - - - - - - jnk1/mapk8 associated membrane protein [Source:ZFIN;Acc:ZDB-GENE-040718-382]
51. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.906 - 0.906 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
52. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.905 - 0.905 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
53. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.904 - 0.904 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
54. wnt7aa ENSDARG00000044827 645 0.904 - 0.904 - - - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
55. serpine2 ENSDARG00000029353 2274 0.904 - 0.904 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
56. lcn15 ENSDARG00000067851 140 0.903 - 0.903 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
57. lsr ENSDARG00000099291 881 0.902 - 0.902 - - - - - - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
58. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 0.902 - 0.902 - - - - - - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
59. eml2 ENSDARG00000008808 706 0.901 - 0.901 - - - - - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
60. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.901 - 0.901 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
61. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.901 - 0.901 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
62. ube2j2 ENSDARG00000061161 844 0.901 - 0.901 - - - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
63. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.9 - 0.900 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
64. SEC16B ENSDARG00000099554 411 0.899 - 0.899 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
65. sas sas 1783 0.898 - 0.898 - - - - - - -
66. CT485993.2 CT485993.2 1419 0.895 - 0.895 - - - - - - -
67. flt4 ENSDARG00000104453 557 0.894 - 0.894 - - - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
68. NIPAL4 ENSDARG00000059365 597 0.894 - 0.894 - - - - - - - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
69. lrrc6 ENSDARG00000053318 146 0.893 - 0.893 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
70. aff4 ENSDARG00000001857 134 0.892 - 0.892 - - - - - - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
71. rab40c ENSDARG00000061208 1072 0.892 - 0.892 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
72. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.891 - 0.891 - - - - - - - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
73. fam63b 484 0.891 - 0.891 - - - - - - - family with sequence similarity 63, member B
74. CR376783.1 ENSDARG00000074235 259 0.89 - 0.890 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
75. zgc:136474 zgc:136474 658 0.889 - 0.889 - - - - - - -
76. golga4 ENSDARG00000075331 447 0.889 - 0.889 - - - - - - - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
77. prkar1ab ENSDARG00000101755 555 0.889 - 0.889 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
78. atp5s ENSDARG00000012072 294 0.889 - 0.889 - - - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]
79. tial1 ENSDARG00000009525 1856 0.888 - 0.888 - - - - - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
80. rgs19 ENSDARG00000077385 783 0.887 - 0.887 - - - - - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
81. wtap ENSDARG00000042642 1779 0.884 - 0.884 - - - - - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
82. kcnj1a.4 ENSDARG00000090635 356 0.884 - 0.884 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
83. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.884 - 0.884 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
84. cmasb 499 0.883 - 0.883 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
85. esrrd ENSDARG00000015064 291 0.883 - 0.883 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
86. ckap5 ENSDARG00000102674 5068 0.882 - 0.882 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
87. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.882 - 0.882 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
88. tmem184a ENSDARG00000104538 661 0.879 - 0.879 - - - - - - - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
89. nans nans 1365 0.879 - - - - - - 0.879 - -
90. cdca5 ENSDARG00000044437 2041 0.879 - 0.879 - - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
91. mrps11 ENSDARG00000075129 1360 0.878 - 0.878 - - - - - - - mitochondrial ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040724-84]
92. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.878 - 0.878 - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
93. BX005256.1 ENSDARG00000106112 467 0.878 - 0.878 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
94. EDEM3 ENSDARG00000074129 805 0.878 - 0.878 - - - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
95. arhgef16 ENSDARG00000077114 759 0.878 - 0.878 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
96. rab35 rab35 1287 0.877 - 0.877 - - - - - - -
97. fbxo42 ENSDARG00000087545 262 0.876 - 0.876 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
98. tbcelb ENSDARG00000019525 299 0.876 - 0.876 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
99. cept1a ENSDARG00000058716 1686 0.875 - 0.875 - - - - - - - choline/ethanolamine phosphotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-081105-47]
100. rnf34a ENSDARG00000038300 179 0.874 - 0.874 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]

There are 743 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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