Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rfxap

Gene Name Gene ID Reads Annotation
rfxap ENSDARG00000076891 1299 regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]










Genes with expression patterns similar to rfxap

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfxap ENSDARG00000076891 1299 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
2. lhfpl2b_1 ENSDARG00000098153 1596 1.793 - - - - - 0.794 0.999 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
3. FP236789.2 FP236789.2 335 1.612 0.830 0.782 - - - - - - -
4. CR626962.1 ENSDARG00000096981 220 1.61 0.859 0.751 - - - - - - -
5. acvr2aa ENSDARG00000011188 1454 1.609 0.767 0.842 - - - - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
6. SLC22A15 ENSDARG00000055445 111 1.608 0.823 0.785 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
7. ube2j1 ENSDARG00000033489 497 1.583 0.735 0.848 - - - - - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
8. reep3l reep3l 608 1.563 - 0.713 - - - 0.850 - - -
9. b3gnt3.4 ENSDARG00000058100 117 1.559 - 0.819 - - - 0.740 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
10. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.549 0.827 - - - - 0.722 - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
11. hat1 ENSDARG00000034916 5712 1.533 - 0.768 - - - 0.765 - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
12. orc5 ENSDARG00000021579 536 1.529 - 0.811 - - - 0.718 - - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
13. epha4l ENSDARG00000010767 1184 1.517 0.785 0.732 - - - - - - - eph receptor A4, like [Source:ZFIN;Acc:ZDB-GENE-990415-61]
14. CABZ01081148.1 CABZ01081148.1 789 1.508 - 0.800 - - - - - 0.708 -
15. zgc:92326 zgc:92326 94 1.488 - 0.780 - - - 0.708 - - -
16. pemt ENSDARG00000103614 474 1.451 - 0.730 - - - 0.721 - - - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
17. gtf2a1 ENSDARG00000011000 2026 1.438 - 0.710 - - - - - 0.728 - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
18. hoxc10a ENSDARG00000070348 2323 1 - - - - - - 1.000 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
19. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 1 - - - - - - 1.000 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
20. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1 - - - - - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
21. rnd3a ENSDARG00000076799 4705 1 - - - - - - 1.000 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
22. pcif1 ENSDARG00000099084 2851 1 - - - - - - 1.000 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
23. LMLN ENSDARG00000061265 1618 1 - - - - - - 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
24. NDUFB2 ENSDARG00000045490 9141 1 - - - - - - 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
25. si:dkey-184p9.7 ENSDARG00000092726 2679 1 - - - - - - 1.000 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
26. CCNA2 ENSDARG00000011094 3996 1 - - - - - - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
27. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - 1.000 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
28. cenpf ENSDARG00000055133 5267 1 - - - - - - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
29. ttll4 ENSDARG00000078935 1663 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
30. lepre1 lepre1 5346 1 - - - - - - 1.000 - -
31. PREX2 ENSDARG00000071692 827 1 - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
32. slc7a4 ENSDARG00000068286 1693 1 - - - - - - 1.000 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
33. oafa ENSDARG00000075851 2015 1 - - - - - - 1.000 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
34. cx44.1 cx44.1 799 1 - - - - - - 1.000 - -
35. gcn1l1 gcn1l1 6031 1 - - - - - - 1.000 - -
36. slc4a2b ENSDARG00000052330 1900 1 - - - - - - 1.000 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
37. plagl2 ENSDARG00000076657 2057 1 - - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
38. CR388095.3 CR388095.3 2548 1 - - - - - - 1.000 - -
39. pinx1 ENSDARG00000023532 4452 1 - - - - - - 1.000 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
40. FAT1 FAT1 689 1 - - - - - - 1.000 - -
41. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1 - - - - - - 1.000 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
42. CR847934.1 CR847934.1 2658 1 - - - - - - 1.000 - -
43. fam160a1 fam160a1 1445 1 - - - - - - 1.000 - -
44. pdlim5b ENSDARG00000027600 4252 1 - - - - - - 1.000 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
45. TSG101 TSG101 1686 1 - - - - - - 1.000 - -
46. atp6ap1b ENSDARG00000037153 3970 0.999 - - - - - - 0.999 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
47. dct ENSDARG00000006008 2466 0.999 - - - - - - 0.999 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
48. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.999 - - - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
49. alcamb ENSDARG00000058538 5672 0.999 - - - - - - 0.999 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
50. rtf1 ENSDARG00000008947 6596 0.999 - - - - - - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
51. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
52. ryr1a ENSDARG00000011422 2377 0.999 - - - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
53. wwp2 ENSDARG00000061345 3459 0.999 - - - - - - 0.999 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
54. ABHD12B ABHD12B 1877 0.998 - - - - - - 0.998 - -
55. aldh7a1 ENSDARG00000018426 4637 0.998 - - - - - - 0.998 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
56. purbb ENSDARG00000103546 4983 0.997 - - - - - - 0.997 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
57. si:ch211-51e12.7 ENSDARG00000045914 9598 0.997 - - - - - - 0.997 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
58. lfng ENSDARG00000037879 11783 0.997 - - - - - - 0.997 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
59. ptprfb ENSDARG00000005754 7178 0.997 - - - - - - 0.997 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
60. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.997 - - - - - - 0.997 - -
61. jagn1b ENSDARG00000014995 2063 0.997 - - - - - - 0.997 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
62. ist1 ENSDARG00000051888 4536 0.996 - - - - - - 0.996 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
63. vcl vcl 6667 0.996 - - - - - - 0.996 - -
64. ncl ENSDARG00000002710 16951 0.996 - - - - - - 0.996 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
65. ostc ENSDARG00000104901 16240 0.993 - - - - - - 0.993 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
66. si:ch211-160e1.5 5586 0.992 - - - - - - 0.992 - - si:ch211-160e1.5
67. SNORD72 SNORD72 4018 0.992 - - - - - - 0.992 - -
68. sgms1 ENSDARG00000029621 6376 0.99 - - - - - - 0.990 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
69. atp5h 18018 0.987 - - - - - - 0.987 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
70. myh10 ENSDARG00000000103 7522 0.987 - - - - - - 0.987 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
71. eif5a2 ENSDARG00000056186 43804 0.967 - - - - - - 0.967 - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
72. marcksl1a ENSDARG00000039034 37303 0.959 - - - - - - 0.959 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
73. ccni ENSDARG00000068214 17558 0.945 - - - - - - 0.945 - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
74. anapc15 ENSDARG00000101285 391 0.939 0.939 - - - - - - - - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
75. hbbe1.1 ENSDARG00000113599 64815 0.938 - - - - - - 0.938 - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
76. tmod4 ENSDARG00000020890 17436 0.935 - - - - - - 0.935 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
77. CU914813.1 CU914813.1 29656 0.918 - - - - - - 0.918 - -
78. atp5c1 31368 0.918 - - - - - - 0.918 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
79. mapk8ip3 ENSDARG00000062531 631 0.918 - 0.918 - - - - - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
80. zgc:123217 ENSDARG00000059026 292 0.913 0.913 - - - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
81. nutf2l ENSDARG00000014499 3927 0.908 - - - - - 0.908 - - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
82. capns1a ENSDARG00000035329 10870 0.907 - - - - - - 0.907 - - calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
83. MTBP ENSDARG00000090447 174 0.903 0.903 - - - - - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
84. kif3b ENSDARG00000101120 1158 0.901 - 0.901 - - - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
85. cutc ENSDARG00000077306, ENSDARG00000113409 238 0.901 - 0.901 - - - - - - - cutC copper transporter homolog (E. coli) [Source:ZFIN;Acc:ZDB-GENE-041010-144]
86. zgc:174563 zgc:174563 198 0.901 0.901 - - - - - - - -
87. kdr ENSDARG00000017321 31 0.9 0.900 - - - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
88. tctn1 ENSDARG00000078447 330 0.9 0.900 - - - - - - - - tectonic family member 1 [Source:ZFIN;Acc:ZDB-GENE-081104-157]
89. sc:d0139 sc:d0139 233 0.9 0.900 - - - - - - - -
90. SHF SHF 92 0.898 0.898 - - - - - - - -
91. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.895 0.895 - - - - - - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
92. rps16 ENSDARG00000045487 43243 0.895 - - - - - - 0.895 - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
93. pdxka ENSDARG00000088959 217 0.893 0.893 - - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
94. ptar1 ENSDARG00000102338 511 0.893 - - - - - 0.893 - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-17]
95. si:ch211-215p11.4 si:ch211-215p11.4 67 0.892 0.892 - - - - - - - -
96. ube4a ENSDARG00000040571 172 0.892 - 0.892 - - - - - - - ubiquitination factor E4A (UFD2 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-21]
97. ubc ENSDARG00000102632 36050 0.892 - - - - - - 0.892 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
98. dgcr14 1608 0.89 - 0.890 - - - - - - - DiGeorge syndrome critical region gene 14
99. ftr64 ENSDARG00000101514 33 0.89 0.890 - - - - - - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
100. AKNA ENSDARG00000087110 39 0.889 0.889 - - - - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA