Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rfx5

Gene Name Gene ID Reads Annotation
rfx5 ENSDARG00000063258 806 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]










Genes with expression patterns similar to rfx5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx5 ENSDARG00000063258 806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
2. srsf1b ENSDARG00000017843 2760 1.697 - 0.706 - - - - - - 0.991 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
3. cbx6a ENSDARG00000071051 379 1.649 - 0.844 - - - 0.805 - - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
4. BCL6B ENSDARG00000069335 602 1 - - - - - - - - 1.000 B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
5. CABZ01080492.1 CABZ01080492.1 495 1 - - - - - - - - 1.000
6. WIZ WIZ 1188 1 - - - - - - - - 1.000
7. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1 - - - - - - - - 1.000 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
8. cap1 ENSDARG00000016350 891 1 - - - - - - - - 1.000 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
9. TTF1_5 TTF1_5 705 1 - - - - - - - - 1.000
10. SNAP23_1 SNAP23_1 613 1 - - - - - - - - 1.000
11. GTF3C1 GTF3C1 836 1 - - - - - - - - 1.000
12. zgc:110843 ENSDARG00000073845 940 1 - - - - - - - - 1.000 zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
13. sugp1 ENSDARG00000075936 826 1 - - - - - - - - 1.000 SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
14. snx27b ENSDARG00000016977 2768 1 - - - - - - - - 1.000 sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
15. epb41a ENSDARG00000099283 860 1 - - - - - - - - 1.000 erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
16. gsk3aa ENSDARG00000029501 957 0.999 - - - - - - - - 0.999 glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
17. PRKAR2B ENSDARG00000036446 812 0.999 - - - - - - - - 0.999 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
18. nbr1 nbr1 1161 0.999 - - - - - - - - 0.999
19. rgs19 ENSDARG00000077385 783 0.999 - - - - - - - - 0.999 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
20. ppargc1b ENSDARG00000101569 3452 0.999 - - - - - - - - 0.999 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
21. BAX BAX 1673 0.999 - - - - - - - - 0.999
22. fam21c 1768 0.999 - - - - - - - - 0.999 family with sequence similarity 21, member C, transcript variant X6
23. rcbtb2 ENSDARG00000090687 1658 0.999 - - - - - - - - 0.999 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
24. tarbp2 ENSDARG00000070471 1946 0.999 - - - - - - - - 0.999 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
25. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.999 - - - - - - - - 0.999 peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
26. carhsp1 ENSDARG00000053129 2100 0.999 - - - - - - - - 0.999 calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
27. cacna1sb ENSDARG00000042552 1320 0.999 - - - - - - - - 0.999 calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
28. ZNF337_25 ZNF337_25 1713 0.999 - - - - - - - - 0.999
29. tlk1b ENSDARG00000100715 1153 0.999 - - - - - - - - 0.999 tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
30. spag9a ENSDARG00000074531 1195 0.999 - - - - - - - - 0.999 sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]
31. cicb ENSDARG00000055502 1356 0.999 - - - - - - - - 0.999 capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
32. dcaf6 ENSDARG00000078311 1118 0.999 - - - - - - - - 0.999 ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
33. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 0.998 - - - - - - - - 0.998 leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
34. slc39a10 ENSDARG00000005823 2634 0.998 - - - - - - - - 0.998 solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
35. CC2D1A 1262 0.998 - - - - - - - - 0.998 coiled-coil and C2 domain containing 1A, transcript variant X2
36. CYHR1 ENSDARG00000061057 2625 0.998 - - - - - - - - 0.998 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
37. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 0.998 - - - - - - - - 0.998 CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
38. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 0.998 - - - - - - - - 0.998 growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
39. tmbim4 ENSDARG00000014361 2549 0.998 - - - - - - - - 0.998 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
40. C25H12orf73 C25H12orf73 2031 0.998 - - - - - - - - 0.998
41. ZC3H4 ENSDARG00000078355 1888 0.998 - - - - - - - - 0.998 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
42. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 0.998 - - - - - - - - 0.998 microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
43. mycla ENSDARG00000006003 1866 0.998 - - - - - - - - 0.998 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
44. abcf2a ENSDARG00000038785 2065 0.998 - - - - - - - - 0.998 ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
45. pafah1b1a ENSDARG00000032013 3183 0.996 - - - - - - - - 0.996 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
46. csrp2bp 2642 0.996 - - - - - - - - 0.996 csrp2 binding protein
47. plxnb1b ENSDARG00000017211 4676 0.995 - - - - - - - - 0.995 plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
48. tkt tkt 7203 0.995 - - - - - - - - 0.995
49. prtfdc1 ENSDARG00000011683 1534 0.994 - - - - - - - - 0.994 phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
50. NAT16 ENSDARG00000086222 4682 0.994 - - - - - - - - 0.994 N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
51. tshz3a ENSDARG00000087394 2455 0.994 - - - - - - - - 0.994 teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
52. zgc:100868 ENSDARG00000004748 2582 0.994 - - - - - - - - 0.994 zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
53. col4a1 ENSDARG00000055009 3083 0.994 - - - - - - - - 0.994 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
54. TNRC6C_2 TNRC6C_2 2444 0.993 - - - - - - - - 0.993
55. ncoa4 ENSDARG00000021439 4581 0.993 - - - - - - - - 0.993 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
56. nsfl1c ENSDARG00000087640 2226 0.993 - - - - - - - - 0.993 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
57. nhsl1b ENSDARG00000042627 3697 0.992 - - - - - - - - 0.992 NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
58. zfr ENSDARG00000027109, ENSDARG00000116459 4171 0.992 - - - - - - - - 0.992 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
59. gmps ENSDARG00000079848 8217 0.992 - - - - - - - - 0.992 guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
60. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 0.991 - - - - - - - - 0.991 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
61. C19H6orf62 C19H6orf62 2859 0.991 - - - - - - - - 0.991
62. COLGALT1 ENSDARG00000073974 5069 0.99 - - - - - - - - 0.990 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
63. ing4 ENSDARG00000030716 5908 0.988 - - - - - - - - 0.988 inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
64. hcfc1b ENSDARG00000012519 3633 0.987 - - - - - - - - 0.987 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
65. celf4 ENSDARG00000070045 1537 0.986 - - - - - - - - 0.986 CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
66. hhatlb ENSDARG00000005139 6674 0.986 - - - - - - - - 0.986 hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
67. mgea5 6076 0.984 - - - - - - - - 0.984 meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
68. sox2 ENSDARG00000070913 2763 0.984 - - - - - - - - 0.984 SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
69. etf1 etf1 12861 0.984 - - - - - - - - 0.984
70. tmem63ba ENSDARG00000104559 11859 0.983 - - - - - - - - 0.983 transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
71. LIMD2 ENSDARG00000078092 3414 0.977 - - - - - - - - 0.977 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
72. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.977 - - - - - - - - 0.977 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
73. itgav ENSDARG00000006314 4277 0.974 - - - - - - - - 0.974 integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
74. cd82a ENSDARG00000019098 6761 0.974 - - - - - - - - 0.974 CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
75. dbn1 ENSDARG00000069113 4527 0.973 - - - - - - - - 0.973 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
76. pax2a ENSDARG00000028148 1408 0.973 - - - - - - - - 0.973 paired box 2a [Source:ZFIN;Acc:ZDB-GENE-990415-8]
77. UBE2QL1 ENSDARG00000079276 3474 0.972 - - - - - - - - 0.972 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
78. cnn3b ENSDARG00000029856 4807 0.969 - - - - - - - - 0.969 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
79. txnipa ENSDARG00000036107 8863 0.968 - - - - - - - - 0.968 thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
80. zgc:158409 zgc:158409 21963 0.963 - - - - - - - - 0.963
81. ogdha ENSDARG00000034270 10334 0.962 - - - - - - - - 0.962 oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
82. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 0.961 - - - - - - - - 0.961 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
83. c3a c3a 6690 0.961 - - - - - - - - 0.961
84. sf3b4 ENSDARG00000018574 7470 0.96 - - - - - - - - 0.960 splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
85. NDUFA3 ENSDARG00000041400 7939 0.96 - - - - - - - - 0.960 NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
86. lmnb1 ENSDARG00000044299 9817 0.956 - - - - - - - - 0.956 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
87. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.955 - - - - - - - - 0.955 proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
88. atp1a3a ENSDARG00000018259 5393 0.954 - - - - - - - - 0.954 ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
89. scrt1a ENSDARG00000100821 2687 0.948 - - - - - - - - 0.948 scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
90. plscr3b ENSDARG00000069432 8500 0.946 - - - - - - - - 0.946 phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
91. foxp4 ENSDARG00000076120 9458 0.943 - - - - - - - - 0.943 forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
92. smad7 ENSDARG00000016858 1660 0.942 - - - - - - - - 0.942 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
93. tspo ENSDARG00000026655 12517 0.937 - - - - - - - - 0.937 translocator protein [Source:ZFIN;Acc:ZDB-GENE-041010-125]
94. cand1 ENSDARG00000017841 8164 0.931 - - - - - - - - 0.931 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
95. mllt10 ENSDARG00000045401 7557 0.93 - - - - - - - - 0.930 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
96. CCK CCK 1826 0.926 - 0.926 - - - - - - -
97. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 0.926 - - - - - - - - 0.926 ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
98. papola ENSDARG00000009585 9567 0.914 - - - - - - - - 0.914 poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
99. nusap1 ENSDARG00000002403 6953 0.911 - - - - - - - - 0.911 nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
100. atp1b1a ENSDARG00000013144 19744 0.9 - - - - - - - - 0.900 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]

There are 284 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA