Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfx3

Gene Name Gene ID Reads Annotation
rfx3 ENSDARG00000014550 2 regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]










Genes with expression patterns similar to rfx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx3 ENSDARG00000014550 2 3 - - 1.000 1.000 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
2. si:dkey-276l13.5 si:dkey-276l13.5 3 1.941 - - - 0.941 1.000 - - - -
3. ATP9A ENSDARG00000115869 9 1.699 - - 0.791 - 0.908 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
4. si:ch211-212n6.18 si:ch211-212n6.18 233 1.54 - - 0.817 - 0.723 - - - -
5. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
6. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
7. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
8. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
9. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - 1.000 - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
10. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
11. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
12. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
13. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
14. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
15. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
16. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
17. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
18. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
19. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
20. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
21. wibg wibg 2 1 - - - - 1.000 - - - -
22. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
23. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
24. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
25. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
26. BIN1 BIN1 11 1 - - - - 1.000 - - - -
27. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
28. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
29. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
30. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
31. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
32. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
33. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
34. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
35. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
36. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
37. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
38. MOB2 MOB2 4 1 - - - - 1.000 - - - -
39. U1_15 U1_15 1 1 - - - - 1.000 - - - -
40. C2 C2 5 1 - - - 1.000 - - - - -
41. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
42. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
43. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
44. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
45. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
46. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
47. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
48. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
49. F13A1 F13A1 1 1 - - - - 1.000 - - - -
50. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
51. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
52. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
53. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
54. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
55. U1_3 U1_3 1 1 - - - 1.000 - - - - -
56. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
57. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
58. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
59. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
60. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
61. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
62. U8 U8 11 1 - - - - 1.000 - - - -
63. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
64. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
65. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
66. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
67. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
68. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
69. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
70. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
71. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
72. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
73. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
74. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
75. CST7 CST7 22 1 - - - - 1.000 - - - -
76. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
77. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
78. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
79. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
80. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
81. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
82. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
83. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
84. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
85. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
86. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
87. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
88. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
89. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
90. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
91. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
92. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
93. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
94. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
95. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
96. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
97. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
98. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
99. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
100. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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