Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfx3

Gene Name Gene ID Reads Annotation
rfx3 ENSDARG00000014550 2 regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]










Genes with expression patterns similar to rfx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx3 ENSDARG00000014550 2 3 - - 1.000 1.000 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
2. si:dkey-276l13.5 si:dkey-276l13.5 3 1.941 - - - 0.941 1.000 - - - -
3. ATP9A ENSDARG00000115869 9 1.699 - - 0.791 - 0.908 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
4. si:ch211-212n6.18 si:ch211-212n6.18 233 1.54 - - 0.817 - 0.723 - - - -
5. F13A1 F13A1 1 1 - - - - 1.000 - - - -
6. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
7. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
8. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
9. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
10. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
11. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
12. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
13. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
14. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
15. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
16. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
17. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
18. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
19. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
20. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
21. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
22. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
23. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
24. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
25. U1_18 U1_18 0 1 - - - - 1.000 - - - -
26. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
27. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
28. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
29. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
30. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
31. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
32. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
33. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
34. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
35. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
36. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
37. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
38. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
39. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
40. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
41. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
42. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
43. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
44. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
45. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
46. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
47. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
48. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
49. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
50. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
51. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
52. BIN1 BIN1 11 1 - - - - 1.000 - - - -
53. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
54. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
55. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
56. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
57. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
58. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
59. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
60. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
61. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
62. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
63. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
64. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
65. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
66. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
67. CST7 CST7 22 1 - - - - 1.000 - - - -
68. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
69. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
70. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
71. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
72. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
73. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
74. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
75. C2 C2 5 1 - - - 1.000 - - - - -
76. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
77. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
78. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
79. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
80. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
81. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
82. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
83. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
84. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
85. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
86. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
87. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
88. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
89. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
90. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
91. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
92. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
93. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
94. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
95. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
96. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
97. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
98. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
99. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
100. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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