Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfx3

Gene Name Gene ID Reads Annotation
rfx3 ENSDARG00000014550 2 regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]










Genes with expression patterns similar to rfx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx3 ENSDARG00000014550 2 3 - - 1.000 1.000 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
2. si:dkey-276l13.5 si:dkey-276l13.5 3 1.941 - - - 0.941 1.000 - - - -
3. ATP9A ENSDARG00000115869 9 1.699 - - 0.791 - 0.908 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
4. si:ch211-212n6.18 si:ch211-212n6.18 233 1.54 - - 0.817 - 0.723 - - - -
5. U1_3 U1_3 1 1 - - - 1.000 - - - - -
6. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
7. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
8. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
9. ODF2 ODF2 6 1 - - - - 1.000 - - - -
10. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
11. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
12. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
13. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
14. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
15. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
16. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
17. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
18. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
19. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
20. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
21. U8 U8 11 1 - - - - 1.000 - - - -
22. U1_15 U1_15 1 1 - - - - 1.000 - - - -
23. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
24. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
25. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
26. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
27. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
28. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
29. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
30. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
31. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
32. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
33. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
34. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
35. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
36. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - 1.000 - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
37. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
38. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
39. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
40. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
41. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
42. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
43. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
44. MOB2 MOB2 4 1 - - - - 1.000 - - - -
45. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
46. wibg wibg 2 1 - - - - 1.000 - - - -
47. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
48. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
49. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
50. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
51. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
52. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
53. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
54. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
55. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
56. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
57. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
58. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
59. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
60. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
61. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
62. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
63. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
64. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
65. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
66. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
67. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
68. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
69. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
70. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
71. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
72. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
73. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
74. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
75. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
76. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
77. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
78. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
79. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
80. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
81. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
82. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
83. C2 C2 5 1 - - - 1.000 - - - - -
84. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
85. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
86. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
87. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
88. CST7 CST7 22 1 - - - - 1.000 - - - -
89. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
90. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
91. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
92. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
93. BIN1 BIN1 11 1 - - - - 1.000 - - - -
94. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
95. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
96. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
97. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
98. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
99. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
100. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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