Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rfx2

Gene Name Gene ID Reads Annotation
rfx2 ENSDARG00000013575 1275 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]










Genes with expression patterns similar to rfx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx2 ENSDARG00000013575 1275 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
2. sf3a3 ENSDARG00000100114 4511 2.396 - 0.722 - - - 0.803 - 0.871 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
3. smurf2 ENSDARG00000038067 2057 2.395 - - - 0.711 - 0.864 - 0.820 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
4. rassf8b ENSDARG00000045485 1568 2.391 - - - 0.771 - - - 0.710 0.910 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
5. si:dkey-226l10.6 ENSDARG00000087483 1651 2.315 - 0.744 - 0.759 - - - - 0.812 si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
6. vps45 ENSDARG00000061180 791 1.876 - - - - - - - 0.915 0.961 vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
7. kbp kbp 701 1.839 - - - - - 0.877 - - 0.962
8. dnajb9a ENSDARG00000052072 578 1.822 - - - - - 0.866 - - 0.956 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
9. C16H8orf76 C16H8orf76 329 1.821 - - - - - - - 0.851 0.970
10. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.803 - - - - - 0.836 - - 0.967 glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
11. traf2b ENSDARG00000101036 429 1.788 - - - - - 0.841 - - 0.947 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
12. prrg4 ENSDARG00000030753 1008 1.781 - - - - - - - 0.837 0.944 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
13. rhot2 ENSDARG00000056328 1123 1.776 - - - - - 0.940 - 0.836 - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
14. axin2 ENSDARG00000100149 4223 1.772 - - - - - - - 0.854 0.918 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
15. col4a3 ENSDARG00000003395 499 1.766 - - - - - 0.821 - - 0.945 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
16. xpot ENSDARG00000099652 3026 1.756 - - - - - 0.790 - - 0.966 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
17. adipor1b ENSDARG00000042717 1348 1.746 - - - - - - - 0.841 0.905 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
18. grp ENSDARG00000043074 747 1.744 - - - - - 0.797 - - 0.947 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
19. lxn ENSDARG00000043102 415 1.742 - - - - - 0.779 - - 0.963 latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
20. prep ENSDARG00000057151 3016 1.742 - - - - - 0.906 0.836 - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
21. qdpra ENSDARG00000040190 4064 1.741 - - - - - - - 0.816 0.925 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
22. myeov2 3351 1.736 - - - - - 0.840 - - 0.896 myeloma overexpressed 2
23. rqcd1 2301 1.721 - - - - - - 0.750 - 0.971 RCD1 required for cell differentiation1 homolog (S. pombe)
24. acadl ENSDARG00000088357, ENSDARG00000115321 1179 1.721 - - - - - 0.754 - - 0.967 acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
25. sh3rf1 ENSDARG00000070470 1463 1.714 - - - - - 0.776 - - 0.938 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
26. trim33 ENSDARG00000016181 1718 1.709 - 0.740 - - - - - - 0.969 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
27. ZNF576 ZNF576 1447 1.703 - - - - - 0.873 - 0.830 -
28. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.703 - - - - - 0.846 - - 0.857 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
29. hmgcrb ENSDARG00000105206 2080 1.702 - - - - - - - 0.757 0.945 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
30. cbfa2t2 ENSDARG00000074337 4323 1.702 - - - - - 0.822 - - 0.880 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
31. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.697 - - - - - 0.894 - 0.803 - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
32. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.692 - - - - - 0.739 - - 0.953 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
33. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.681 0.757 - - - - 0.924 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
34. cdc20 ENSDARG00000100741 3264 1.679 - - - - - 0.773 - - 0.906 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
35. pank2 ENSDARG00000003311 881 1.679 - - - 0.716 - - - - 0.963 pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
36. lrpprc ENSDARG00000043970 3847 1.668 - - - - - - - 0.753 0.915 leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
37. me3 ENSDARG00000002305 3305 1.668 - - - - - 0.812 - 0.856 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
38. asap1a ENSDARG00000029463 1566 1.666 - - - - - 0.787 - 0.879 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
39. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.664 - - - - - 0.758 - - 0.906 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
40. tmed4 ENSDARG00000024954 3476 1.663 - - - - - 0.918 - 0.745 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
41. safb ENSDARG00000020467 5608 1.661 - - - - - 0.843 - 0.818 - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
42. HECW1 HECW1 1531 1.661 - - - - - - - 0.716 0.945
43. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.654 - - - - - - - 0.823 0.831 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
44. ppap2b ppap2b 2900 1.651 - - - - - - - 0.839 0.812
45. vkorc1 ENSDARG00000086183 1212 1.65 - 0.726 - - - - - - 0.924 vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
46. samd11 ENSDARG00000077852 631 1.642 - - - - - 0.846 - 0.796 - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
47. mafk ENSDARG00000100947 1460 1.64 - - - - - 0.840 - 0.800 - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
48. pmepa1 ENSDARG00000039325 652 1.639 - - - - - - 0.718 - 0.921 prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
49. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.638 - 0.702 - - - - - - 0.936 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
50. ufm1 ENSDARG00000043857 4152 1.628 - 0.728 - - - - - - 0.900 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
51. hiat1b ENSDARG00000043055 757 1.628 - - - 0.751 - - - 0.877 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
52. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.626 - - - - - 0.771 - 0.855 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
53. cmtm7 ENSDARG00000010032 875 1.624 - 0.716 - - - 0.908 - - - CKLF-like MARVEL transmembrane domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-041111-174]
54. tmem243b ENSDARG00000033179, ENSDARG00000114077, ENSDARG00000116817 1171 1.623 - 0.726 - - - 0.897 - - - transmembrane protein 243, mitochondrial b [Source:ZFIN;Acc:ZDB-GENE-040426-2205]
55. mxd3 ENSDARG00000098350 3040 1.621 - - - - - 0.872 0.749 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
56. BX322601.2 BX322601.2 297 1.619 - - - 0.785 - - - 0.834 -
57. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.618 - - - - - 0.723 - 0.895 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
58. nol11 ENSDARG00000026767 2528 1.616 0.764 - - - - - - 0.852 - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
59. mdm4 ENSDARG00000057513 1954 1.616 - - - - - 0.796 - 0.820 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
60. si:dkey-13i19.8 ENSDARG00000093058 4617 1.61 - - - - - 0.710 - - 0.900 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
61. edem1 ENSDARG00000025094 1343 1.607 - 0.713 - - - - - - 0.894 ER degradation enhancer, mannosidase alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-808]
62. ube2j1 ENSDARG00000033489 497 1.603 - - - - - 0.844 - 0.759 - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
63. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.603 - - - - - - 0.701 - 0.902 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
64. znf740 znf740 2458 1.602 - - - - - 0.794 - 0.808 -
65. dvl2 ENSDARG00000056184 1525 1.602 - - - - - 0.850 - 0.752 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
66. CR954963.1 ENSDARG00000097153 1135 1.598 - - - - - - 0.720 0.878 -
67. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.594 - - - - - 0.769 - 0.825 - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
68. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.59 - 0.740 - - - - - 0.850 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
69. lgals1l1 ENSDARG00000088711 4515 1.587 - - - 0.791 - 0.796 - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
70. RASGRF2 RASGRF2 644 1.586 0.822 - - - - - 0.764 - -
71. FAM171A2 FAM171A2 707 1.577 - - - - - 0.835 - 0.742 -
72. rngtt ENSDARG00000032261 833 1.576 - - - - - 0.831 0.745 - - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
73. cldn5a ENSDARG00000043716 3865 1.575 - - - - - - 0.708 0.867 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
74. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.569 - - - - - 0.754 - 0.815 - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
75. PPP1R9B PPP1R9B 855 1.566 - - - - - - 0.719 0.847 -
76. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.559 - - - - - 0.808 0.751 - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
77. emc6 ENSDARG00000035282 4981 1.553 - - - - - - - 0.800 0.753 ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
78. bc2 5213 1.551 - - - - - 0.790 - 0.761 - putative breast adenocarcinoma marker
79. fam219aa ENSDARG00000016396 1788 1.544 - 0.719 - - - - - 0.825 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
80. xrcc5_1 ENSDARG00000099298 1533 1.542 - 0.712 - - - - - 0.830 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
81. lsm14ab ENSDARG00000100553 3837 1.538 - - - - - - - 0.792 0.746 LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
82. CARKD 1398 1.538 - - - - - 0.828 0.710 - - carbohydrate kinase domain containing, transcript variant X7
83. nfe2l3 ENSDARG00000019810 3682 1.535 - - - - - 0.716 - - 0.819 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
84. xrcc1 ENSDARG00000009494 1346 1.532 0.707 - - - - 0.825 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
85. bcas2 ENSDARG00000043631 1971 1.529 - 0.780 - - - 0.749 - - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
86. ep300b ENSDARG00000061108 5173 1.527 - 0.799 - - - - 0.728 - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
87. SENP1 SENP1 1122 1.526 - - - - - - 0.729 0.797 -
88. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 1.526 - - - - - 0.815 - 0.711 - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
89. sphk2 ENSDARG00000069893 1518 1.525 - 0.767 - - - - - 0.758 - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
90. srp9 ENSDARG00000042851 3254 1.519 - - - - - 0.730 - 0.789 - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
91. DST ENSDARG00000101858 4395 1.517 - - - - - 0.758 0.759 - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
92. nrg1 ENSDARG00000104314 1081 1.517 - 0.763 - - - 0.754 - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
93. smek1 ENSDARG00000042187 3509 1.515 - - - - - 0.797 0.718 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
94. acadm ENSDARG00000038900 2319 1.515 - 0.772 - - - - - 0.743 - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
95. sae1 ENSDARG00000010487 2028 1.508 - - - - - - 0.733 0.775 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
96. qki2 ENSDARG00000010018 2230 1.505 - - - - - - 0.703 0.802 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
97. si:dkey-19e4.5 ENSDARG00000089886 2562 1.499 - - - - - - 0.702 0.797 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
98. pias1b ENSDARG00000062445 538 1.497 0.704 - - - - - - 0.793 - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
99. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.494 - 0.704 - - - - - - 0.790 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
100. gstm gstm 4064 1.49 - - - - - 0.722 - 0.768 -

There are 1540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA