Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfx1b

Gene Name Gene ID Reads Annotation
rfx1b ENSDARG00000075904 1175 regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]










Genes with expression patterns similar to rfx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx1b ENSDARG00000075904 1175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
2. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 2.363 - - - 0.811 - 0.849 - 0.703 - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
3. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 2.284 - - - 0.715 - 0.796 0.773 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
4. AIM1L AIM1L 899 2.253 - 0.731 - - - 0.782 0.740 - -
5. rer1 ENSDARG00000012747 6939 2.236 - - - 0.759 - 0.759 0.718 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
6. elp5 ENSDARG00000067918 541 2.187 - - - - - 0.719 0.723 0.745 - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
7. pdip5 pdip5 2643 1.723 - - - - - 0.857 0.866 - -
8. s100z ENSDARG00000038729 442 1.691 - - - 0.846 - 0.845 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
9. chic2 ENSDARG00000022690 184 1.681 - - - 0.852 - - 0.829 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
10. cmasb 499 1.681 - - - - - 0.873 0.808 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
11. rabac1 ENSDARG00000004171 2708 1.668 - - - - - 0.822 0.846 - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
12. CABZ01005777.1 CABZ01005777.1 505 1.667 - - - 0.881 - 0.786 - - -
13. KLHL30 ENSDARG00000076094 366 1.664 - 0.784 - 0.880 - - - - - kelch-like family member 30 [Source:ZFIN;Acc:ZDB-GENE-100913-2]
14. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.663 - - - - - 0.921 0.742 - -
15. PPAP2A PPAP2A 2409 1.655 - 0.816 - 0.839 - - - - -
16. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.652 - - - - - 0.845 0.807 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
17. rrbp1a ENSDARG00000013763 4723 1.64 - - - - - 0.908 0.732 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
18. myeov2 3351 1.64 - - - - - 0.808 0.832 - - myeloma overexpressed 2
19. nipa2 ENSDARG00000055912 1574 1.636 - - - - - 0.870 0.766 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
20. tmem101 ENSDARG00000114508 494 1.631 - - - 0.803 - 0.828 - - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
21. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.631 - - - - - 0.850 0.781 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
22. PRSS23 ENSDARG00000055786 564 1.626 - - - 0.845 - 0.781 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
23. SACM1L SACM1L 416 1.625 - - - 0.845 - - - 0.780 -
24. CCNDBP1 ENSDARG00000039328 486 1.612 - 0.792 - - - 0.820 - - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
25. magt1 ENSDARG00000058062 3903 1.602 - - - - - 0.835 0.767 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
26. nr1d2b ENSDARG00000009594 1144 1.601 - - - - - 0.839 - 0.762 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
27. ppp1r12a ENSDARG00000010784 4333 1.599 - - - 0.759 - 0.840 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
28. col17a1b ENSDARG00000079011 143 1.597 - - - - - 0.818 - 0.779 - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
29. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.595 - - - 0.819 - - 0.776 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
30. bend3 ENSDARG00000076903 320 1.592 - - - 0.855 - - - 0.737 - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
31. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.588 - 0.711 - 0.877 - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
32. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.586 - - - 0.822 - 0.764 - - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
33. ptpn23b ENSDARG00000098689 351 1.584 - - - - - - 0.809 0.775 - protein tyrosine phosphatase, non-receptor type 23, b [Source:ZFIN;Acc:ZDB-GENE-060503-179]
34. CABZ01081749.1 CABZ01081749.1 637 1.582 - - - 0.791 - - 0.791 - -
35. rngtt ENSDARG00000032261 833 1.581 - - - - - 0.860 0.721 - - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
36. cdc20 ENSDARG00000100741 3264 1.58 - - - - - 0.847 0.733 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
37. DST ENSDARG00000101858 4395 1.579 - - - - - 0.834 0.745 - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
38. rab9a ENSDARG00000045027 201 1.577 - - - - - 0.836 0.741 - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
39. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.576 - 0.763 - - - - - 0.813 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
40. CCDC64B CCDC64B 337 1.572 - 0.764 - - - 0.808 - - -
41. efna1a ENSDARG00000030326 1692 1.57 - - - - - 0.838 0.732 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
42. chmp1a ENSDARG00000102643 1078 1.568 - - - 0.863 - - 0.705 - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
43. inhbb ENSDARG00000040777 2141 1.567 - - - 0.813 - - 0.754 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
44. C15H11orf57 C15H11orf57 860 1.56 - - - - - - 0.827 0.733 -
45. U3 U3 287 1.557 - - - 0.822 - - 0.735 - -
46. zgc:153924 507 1.553 - - - 0.817 - - 0.736 - - zgc:153924
47. si:ch211-264e16.1 ENSDARG00000068947 1358 1.55 - - - - - 0.763 0.787 - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
48. gltpd1 gltpd1 377 1.55 - - - 0.833 - - 0.717 - -
49. CDK5RAP2 CDK5RAP2 636 1.545 - - - - - 0.801 0.744 - -
50. smim8 ENSDARG00000071040 622 1.545 - - - - - 0.800 - 0.745 - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
51. zgc:101569 ENSDARG00000038876 1525 1.543 0.724 - - - - 0.819 - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
52. adhfe1 ENSDARG00000053518 499 1.543 - - - - - 0.819 0.724 - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
53. prdm4 ENSDARG00000017366 454 1.539 - - - 0.713 - 0.826 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
54. CABZ01027552.1 CABZ01027552.1 760 1.538 - 0.736 - - - 0.802 - - -
55. si:dkey-95p16.2 ENSDARG00000093484 3413 1.538 - - - 0.717 - - 0.821 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
56. WDR61 ENSDARG00000007755 2827 1.536 - 0.755 - 0.781 - - - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
57. zfand6 ENSDARG00000098443 2507 1.533 0.737 - - - - - 0.796 - - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
58. tmem53 ENSDARG00000038789 411 1.533 - - - - - 0.809 0.724 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
59. rac2 ENSDARG00000038010 5837 1.531 - - - - - 0.768 0.763 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
60. sema3ga ENSDARG00000042545 1603 1.529 - - - 0.801 - - 0.728 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
61. tmem50a ENSDARG00000015757 3244 1.523 - - - - - 0.755 0.768 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
62. rbm17 ENSDARG00000031346 2079 1.52 - - - 0.748 - 0.772 - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
63. nckap5l ENSDARG00000079148 4227 1.518 - 0.715 - 0.803 - - - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
64. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.517 - 0.748 - - - 0.769 - - - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
65. brd1b ENSDARG00000051798 1712 1.516 - - - 0.751 - 0.765 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
66. psmg3 ENSDARG00000098391 920 1.515 - 0.741 - - - - 0.774 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
67. brox ENSDARG00000013659 1334 1.515 - 0.700 - - - 0.815 - - - BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
68. ogt.2 1166 1.514 - 0.731 - - - - - 0.783 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
69. ufc1 ENSDARG00000022340 2618 1.514 - - - - - 0.761 0.753 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
70. SIK1 ENSDARG00000058606 1982 1.508 - 0.752 - - - 0.756 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
71. zgc:172075 ENSDARG00000076146 93 1.507 - - - - - 0.770 0.737 - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
72. si:dkeyp-13a3.10 ENSDARG00000092225 1054 1.502 - - - - - 0.759 0.743 - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
73. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.501 - - - 0.748 - - 0.753 - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
74. BX296538.3 BX296538.3 813 1.499 - 0.753 - - - 0.746 - - -
75. b4galt1 ENSDARG00000002634 1076 1.497 - - - 0.758 - - - 0.739 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
76. ajuba ENSDARG00000077842 1152 1.497 - - - - - 0.756 0.741 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
77. itgb4 ENSDARG00000028507 2568 1.493 - - - - - 0.778 - 0.715 - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
78. commd2 ENSDARG00000003373 540 1.491 - 0.752 - - - - 0.739 - - COMM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-118]
79. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.488 - - - - - 0.727 0.761 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
80. zgc:175214 ENSDARG00000022891 1013 1.487 - - - - - 0.785 0.702 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
81. rhot2 ENSDARG00000056328 1123 1.483 - - - 0.770 - 0.713 - - - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
82. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.481 - - - 0.718 - 0.763 - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
83. zdhhc9 ENSDARG00000060515 981 1.479 - - - - - 0.774 - 0.705 - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
84. dennd1b ENSDARG00000101868 328 1.478 - - - - - 0.774 - 0.704 - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
85. h2afy ENSDARG00000099329 286 1.475 - - - - - - 0.708 0.767 - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
86. apbb2b ENSDARG00000099995 1397 1.466 - - - - - - 0.730 0.736 - amyloid beta (A4) precursor protein-binding, family B, member 2b [Source:ZFIN;Acc:ZDB-GENE-090313-73]
87. map2k4b ENSDARG00000077177 1869 1.464 - 0.744 - - - - - 0.720 - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
88. rbbp5 ENSDARG00000042147 702 1.461 - - - 0.737 - - 0.724 - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
89. PDGFC ENSDARG00000077588 1064 1.46 - - - 0.730 - - 0.730 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
90. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.455 - - - - - 0.740 0.715 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
91. srp9 ENSDARG00000042851 3254 1.453 - 0.723 - - - - 0.730 - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
92. mutyh 512 1.449 - - - - - - 0.729 0.720 - mutY DNA glycosylase
93. grk5 ENSDARG00000032801 490 1.449 - - - - - 0.742 - 0.707 - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
94. eif2b4 ENSDARG00000014004 2213 1.446 - 0.700 - - - - - 0.746 - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
95. ca8 ENSDARG00000039098 401 1.442 - - 0.726 - - - 0.716 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
96. C3H16orf72 C3H16orf72 2059 1.438 - 0.735 - 0.703 - - - - -
97. setd8b 2528 1.438 - - - 0.710 - 0.728 - - - SET domain containing (lysine methyltransferase) 8b
98. CABZ01070045.1 CABZ01070045.1 1322 1.433 - - - 0.709 - - 0.724 - -
99. pvrl1b 1645 1.428 - - - - - 0.727 0.701 - - poliovirus receptor-related 1b
100. map3k7 ENSDARG00000020469 2845 1.425 - - - - - 0.712 0.713 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]

There are 1574 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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