Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rft1

Gene Name Gene ID Reads Annotation
rft1 ENSDARG00000060398 146 RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]










Genes with expression patterns similar to rft1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rft1 ENSDARG00000060398 146 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
2. acy3.1 ENSDARG00000093003 54 1.898 0.952 - - - - - 0.946 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
3. mxa ENSDARG00000021688 14 1.886 0.967 - - - - - 0.919 - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
4. bmp6 ENSDARG00000015686 211 1.853 0.979 - - 0.874 - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
5. CT573468.1 CT573468.1 283 1.808 - - - 0.898 - - 0.910 - -
6. BX324003.2 ENSDARG00000109802 178 1.786 0.860 - - - - - 0.926 - -
7. ZNF135_5 ZNF135_5 73 1.78 - 0.837 - - - - 0.943 - -
8. FAM109B FAM109B 470 1.761 - 0.925 - 0.836 - - - - -
9. has3 ENSDARG00000057210, ENSDARG00000116537 108 1.748 0.961 - - - - 0.787 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
10. ciita ENSDARG00000090851 5 1.745 - - - - - 0.787 0.958 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
11. CU896555.1 CU896555.1 27 1.745 - - - - - 0.787 0.958 - -
12. ubox5 ENSDARG00000058563 161 1.738 - 0.800 - 0.938 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
13. CR932358.2 CR932358.2 15 1.738 - 0.832 - - - - 0.906 - -
14. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.736 - - - 0.888 - - 0.848 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
15. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 1.724 - 0.832 - 0.892 - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
16. nudt2 ENSDARG00000058728 371 1.723 - 0.875 - 0.848 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
17. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.722 0.969 - - - - - 0.753 - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
18. CABZ01074081.1 CABZ01074081.1 109 1.713 0.985 - - - - - 0.728 - -
19. pip5k1ca ENSDARG00000076001 53 1.712 0.938 0.774 - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a [Source:ZFIN;Acc:ZDB-GENE-050208-358]
20. capslb ENSDARG00000003414 77 1.706 - - - - 0.748 - 0.958 - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
21. GPR180 73 1.664 - - - - - 0.787 0.877 - - G protein-coupled receptor 180, transcript variant X2
22. zfyve9a ENSDARG00000101903 437 1.663 0.927 - - 0.736 - - - - - zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
23. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 1.654 - 0.718 - 0.936 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
24. CU856207.1 CU856207.1 87 1.648 - - - - 0.728 - 0.920 - -
25. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1.648 0.946 0.702 - - - - - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
26. narf ENSDARG00000024184, ENSDARG00000110086 240 1.646 - - - 0.795 - - 0.851 - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
27. dock9b ENSDARG00000016311 122 1.638 0.933 0.705 - - - - - - - dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
28. tesk2 ENSDARG00000061450 261 1.634 0.790 - - - - - 0.844 - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
29. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.633 0.723 - - 0.910 - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
30. zgc:111991 zgc:111991 159 1.633 - - - 0.924 - - 0.709 - -
31. ca9 ENSDARG00000102300 193 1.629 - 0.836 - - - - 0.793 - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
32. rdh8a ENSDARG00000028048 334 1.614 - - - 0.822 - - 0.792 - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
33. si:dkey-260c8.4 si:dkey-260c8.4 106 1.613 0.909 - - - - - 0.704 - -
34. ddit4 ENSDARG00000037618 37 1.611 - - - - - 0.787 0.824 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
35. got1l1 ENSDARG00000053644 49 1.597 - - - - - 0.734 0.863 - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
36. CR788316.4 ENSDARG00000105829 297 1.586 - - - 0.777 - - 0.809 - - neoverrucotoxin subunit beta-like [Source:NCBI gene;Acc:100004951]
37. gstz1 ENSDARG00000027984 278 1.585 - 0.725 - 0.860 - - - - - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
38. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 1.584 0.730 0.854 - - - - - - - si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
39. CU683898.1 CU683898.1 203 1.573 - 0.724 - - - - 0.849 - -
40. tm4sf4 ENSDARG00000040747 65 1.567 0.840 - - - - - 0.727 - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
41. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1.563 - 0.706 - - - - 0.857 - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
42. cwf19l2 ENSDARG00000091760 1372 1.556 - 0.744 - 0.812 - - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
43. HYAL2_1 HYAL2_1 266 1.556 - - - 0.817 - - 0.739 - -
44. nle1 ENSDARG00000057105 522 1.555 - - - 0.798 - 0.757 - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
45. ralgapa1 ENSDARG00000076889 36 1.551 - 0.703 - - - - 0.848 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
46. zgc:171566 ENSDARG00000105118 340 1.549 - 0.706 - - - - 0.843 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
47. lpar2a ENSDARG00000042338 285 1.547 0.763 - - - - - 0.784 - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
48. snapc4 ENSDARG00000067673 81 1.536 - - - - 0.730 - 0.806 - - small nuclear RNA activating complex, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5794]
49. si:dkey-225d17.2 si:dkey-225d17.2 361 1.523 0.773 - - - - - 0.750 - -
50. scamp3 ENSDARG00000016765 540 1.509 0.745 - - 0.764 - - - - - secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]
51. dgcr14 1608 1.497 0.794 - - - - - 0.703 - - DiGeorge syndrome critical region gene 14
52. CDKN2AIP ENSDARG00000035853 341 1.476 0.756 0.720 - - - - - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
53. BX119916.1 BX119916.1 19 1.471 - 0.727 - - - - 0.744 - -
54. nxph2a ENSDARG00000063224 75 1.434 - 0.716 - - - - 0.718 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
55. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 1.418 - 0.711 - - - - 0.707 - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
56. dapk1 ENSDARG00000060093 351 0.985 0.985 - - - - - - - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
57. scpp5 ENSDARG00000078622 15 0.985 0.985 - - - - - - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
58. CABZ01038521.1 ENSDARG00000087306 10 0.985 0.985 - - - - - - - -
59. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.985 0.985 - - - - - - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
60. cacng5a ENSDARG00000003326 17 0.985 0.985 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
61. GPR139 14 0.985 0.985 - - - - - - - - G protein-coupled receptor 139, transcript variant X1
62. si:dkey-15h8.11 si:dkey-15h8.11 1260 0.985 0.985 - - - - - - - -
63. U3_1 U3_1 61 0.985 0.985 - - - - - - - -
64. CT955987.1 CT955987.1 9 0.985 0.985 - - - - - - - -
65. ERICH1 18 0.985 0.985 - - - - - - - - glutamate rich 1
66. CABZ01081656.1 CABZ01081656.1 14 0.985 0.985 - - - - - - - -
67. si:ch211-12e1.5 si:ch211-12e1.5 14 0.985 0.985 - - - - - - - -
68. ccr12.3 ccr12.3 79 0.985 0.985 - - - - - - - -
69. col5a2b ENSDARG00000024847 17 0.985 0.985 - - - - - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
70. PLA2G4C_3 PLA2G4C_3 14 0.985 0.985 - - - - - - - -
71. si:dkey-146n1.4 si:dkey-146n1.4 12 0.985 0.985 - - - - - - - -
72. si:dkey-149i8.3 si:dkey-149i8.3 9 0.985 0.985 - - - - - - - -
73. mxtx1 ENSDARG00000069382 32 0.985 0.985 - - - - - - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
74. si:dkey-93m18.6 ENSDARG00000093173 57 0.985 0.985 - - - - - - - - si:dkey-93m18.6 [Source:ZFIN;Acc:ZDB-GENE-091204-133]
75. CR382327.4 CR382327.4 143 0.985 0.985 - - - - - - - -
76. btr21 ENSDARG00000058329, ENSDARG00000100450 120 0.985 0.985 - - - - - - - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
77. si:dkey-6a5.10 si:dkey-6a5.10 17 0.985 0.985 - - - - - - - -
78. ahsg ahsg 39 0.985 0.985 - - - - - - - -
79. CABZ01086801.1 CABZ01086801.1 41 0.985 0.985 - - - - - - - -
80. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 0.985 0.985 - - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
81. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 0.984 0.984 - - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
82. dgat1b ENSDARG00000054914 119 0.984 0.984 - - - - - - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
83. adra2a ENSDARG00000040841, ENSDARG00000111717, ENSDARG00000114002 44 0.984 0.984 - - - - - - - - adrenoceptor alpha 2A [Source:ZFIN;Acc:ZDB-GENE-021010-1]
84. ccdc113 ENSDARG00000006981 67 0.984 0.984 - - - - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
85. CABZ01111953.1 ENSDARG00000099747 38 0.983 0.983 - - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
86. si:dkey-10g2.5 si:dkey-10g2.5 72 0.98 0.980 - - - - - - - -
87. slc30a10 ENSDARG00000103983 46 0.98 0.980 - - - - - - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
88. creb5b ENSDARG00000070536 9 0.978 0.978 - - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
89. si:dkeyp-75b4.9 ENSDARG00000015678 36 0.976 0.976 - - - - - - - - si:dkeyp-75b4.9 [Source:ZFIN;Acc:ZDB-GENE-090313-396]
90. foxq1b ENSDARG00000055395 549 0.975 0.975 - - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
91. si:ch73-249k16.1 si:ch73-249k16.1 36 0.975 0.975 - - - - - - - -
92. si:ch211-66k16.28 ENSDARG00000088423 80 0.975 0.975 - - - - - - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
93. si:dkey-11f4.14 ENSDARG00000098461 35 0.974 0.974 - - - - - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
94. ZNF784_4 ZNF784_4 113 0.974 0.974 - - - - - - - -
95. ftr51 ENSDARG00000029105 103 0.974 0.974 - - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
96. limk1b ENSDARG00000003022 172 0.973 0.973 - - - - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
97. zgc:103508 ENSDARG00000099273 50 0.973 0.973 - - - - - - - - zgc:103508 [Source:ZFIN;Acc:ZDB-GENE-041212-28]
98. LYPLAL1 ENSDARG00000088764 87 0.972 - - - - - - 0.972 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
99. mir148 75 0.971 0.971 - - - - - - - - microRNA 148
100. hspbap1 ENSDARG00000033771 41 0.971 - - - - - - 0.971 - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]

There are 1411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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