Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfc5

Gene Name Gene ID Reads Annotation
rfc5 ENSDARG00000035634 974 replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]










Genes with expression patterns similar to rfc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfc5 ENSDARG00000035634 974 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
2. snrpe ENSDARG00000033175 7462 2.457 0.734 - - - 0.983 - 0.740 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
3. bmi1b ENSDARG00000013076 1020 2.178 - - - - - 0.724 0.713 0.741 - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
4. errfi1 errfi1 979 1.851 - 0.856 - - 0.995 - - - -
5. ripk4 ENSDARG00000043211 775 1.825 - - - - 0.992 - - 0.833 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
6. MAF1 ENSDARG00000013122 6899 1.814 - - - - 0.964 - - 0.850 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
7. phf16 phf16 1116 1.809 - - - - - - 0.918 0.891 -
8. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.797 - 0.802 - - 0.995 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
9. TRHDE_1 TRHDE_1 102 1.777 - - - - - - 0.870 0.907 -
10. vps25 ENSDARG00000059079 3747 1.748 - - - - 0.972 - 0.776 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
11. ndc1 ENSDARG00000021120 2417 1.727 - - - - - - 0.867 0.860 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
12. srcap ENSDARG00000005236 1740 1.706 - - - - 0.993 - - 0.713 - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
13. s100a1 ENSDARG00000015543 274 1.704 - 0.824 - - - - 0.880 - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
14. CU929119.2 CU929119.2 859 1.7 - - - - - - 0.843 0.857 -
15. ATF6B 960 1.693 - - - - - 0.830 0.863 - - activating transcription factor 6 beta
16. smek1 ENSDARG00000042187 3509 1.688 - - 0.713 - 0.975 - - - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
17. hey1 ENSDARG00000070538 986 1.686 0.702 - - - 0.984 - - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
18. CABZ01081749.1 CABZ01081749.1 637 1.667 - - - - - - 0.791 0.876 -
19. riok1 ENSDARG00000016399 936 1.664 - - - - 0.858 - 0.806 - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
20. si:ch211-87m7.2 ENSDARG00000030129 223 1.662 - - - - - 0.745 0.917 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
21. ncdn ENSDARG00000098544 267 1.657 - - - - - 0.814 0.843 - - neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
22. smarcd3a ENSDARG00000038786 2894 1.656 - 0.702 - - 0.954 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
23. wsb1 ENSDARG00000021343 3828 1.655 - - - - 0.952 - 0.703 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
24. CABZ01044023.1 ENSDARG00000117734 240 1.646 - - - - - 0.812 0.834 - -
25. HOMEZ HOMEZ 1824 1.644 - - - - - 0.788 0.856 - -
26. pggt1b ENSDARG00000103464 441 1.64 - - - - - - 0.781 0.859 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
27. CABZ01088061.1 CABZ01088061.1 695 1.625 - - - - - - 0.782 0.843 -
28. si:ch211-113p18.3 ENSDARG00000087835 377 1.621 - - - - - 0.765 0.856 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
29. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.621 - - - - - - 0.815 0.806 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
30. gulp1b ENSDARG00000057833 382 1.615 - 0.748 - - - - - 0.867 - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
31. DST ENSDARG00000101858 4395 1.61 - - - - - - 0.817 0.793 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
32. ruvbl1 ENSDARG00000002591 2381 1.6 - 0.806 - - - - 0.794 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
33. rab20 ENSDARG00000005049 346 1.6 - - - - - - 0.755 0.845 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
34. tmem110 497 1.596 - - - - - 0.746 0.850 - - transmembrane protein 110
35. syt11b ENSDARG00000056105 578 1.596 0.819 - - - - - 0.777 - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
36. si:ch211-121j5.2 si:ch211-121j5.2 86 1.595 - 0.743 - - - - 0.852 - -
37. si:dkey-121j17.6 ENSDARG00000069661 456 1.595 0.871 - - - - - 0.724 - - si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
38. pitpnb ENSDARG00000036005 513 1.59 - - - - - - 0.774 0.816 - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
39. stk16 ENSDARG00000037777 255 1.586 - - - - - - 0.817 0.769 - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
40. kif2c ENSDARG00000076228 2281 1.584 - - - 0.719 - 0.865 - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
41. pdcd11 ENSDARG00000052480 2791 1.574 - 0.732 - - - - - 0.842 - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
42. pknox2 ENSDARG00000055349 784 1.573 0.739 0.834 - - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
43. CABZ01086825.1 CABZ01086825.1 573 1.567 - 0.758 - - - - - 0.809 -
44. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.566 - - - - - - 0.793 0.773 - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
45. zgc:77056 ENSDARG00000029615 297 1.564 - - 0.752 - - - 0.812 - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
46. rspry1 ENSDARG00000062558 1424 1.563 - - - - - - 0.812 0.751 - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
47. mrps18c ENSDARG00000069624, ENSDARG00000114200 983 1.562 - 0.791 - - - - 0.771 - - mitochondrial ribosomal protein S18C [Source:ZFIN;Acc:ZDB-GENE-060503-609]
48. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.556 - - - - - - 0.793 0.763 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
49. trim55b ENSDARG00000058158 586 1.554 - 0.784 - - - - - 0.770 - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
50. nck2a ENSDARG00000018206 231 1.552 - 0.774 - - - - 0.778 - - NCK adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-686]
51. vps45 ENSDARG00000061180 791 1.551 0.783 - - - - - 0.768 - - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
52. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.551 - - - - - 0.764 0.787 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
53. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.547 - - - 0.732 - - 0.815 - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
54. CABZ01024770.1 CABZ01024770.1 150 1.527 - - - - - 0.732 0.795 - -
55. chsy1 ENSDARG00000079027 455 1.52 - - - - - - 0.756 0.764 - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
56. slc6a4a ENSDARG00000061165 206 1.514 - - - - - 0.761 0.753 - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
57. pdxkb ENSDARG00000036546 721 1.508 - - - - - 0.766 0.742 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
58. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 1.503 - 0.745 - - - - 0.758 - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
59. rad18 ENSDARG00000027938 574 1.498 - 0.796 - - - - 0.702 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
60. prkacab ENSDARG00000016809 1441 1.494 - - - - - 0.716 0.778 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
61. BX569781.3 BX569781.3 576 1.492 - - - - - - 0.751 0.741 -
62. dla ENSDARG00000010791 9281 1.475 0.723 0.752 - - - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
63. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.45 0.715 0.735 - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
64. si:dkey-253d23.10 7602 1.435 - - - - - - 0.719 - 0.716 si:dkey-253d23.10, transcript variant X4
65. TRIO TRIO 1601 1.434 - - - - - - 0.706 0.728 -
66. asap1a ENSDARG00000029463 1566 1.433 - 0.700 - - - - 0.733 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
67. C8H5orf51 C8H5orf51 1199 1.432 - - - 0.712 - - 0.720 - -
68. rfc1 ENSDARG00000054799 1416 1.417 - 0.713 - - - 0.704 - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
69. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.414 - - 0.701 - - - 0.713 - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
70. wdr43 ENSDARG00000077264 1992 0.997 - - - - 0.997 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
71. si:dkey-30k6.5 ENSDARG00000057238 617 0.996 - - - - 0.996 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
72. pbx1a ENSDARG00000100494 854 0.996 - - - - 0.996 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
73. sema3fa ENSDARG00000011163 759 0.996 - - - - 0.996 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
74. DENND4B ENSDARG00000102914 1001 0.996 - - - - 0.996 - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
75. slc46a1 ENSDARG00000026149 297 0.995 - - - - 0.995 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
76. tpt1 ENSDARG00000092693 1110 0.995 - - - - 0.995 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
77. kcnq5a ENSDARG00000069954 492 0.995 - - - - 0.995 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
78. si:dkey-70e17.2 si:dkey-70e17.2 371 0.995 - - - - 0.995 - - - -
79. vldlr ENSDARG00000006257 772 0.995 - - - - 0.995 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
80. si:dkey-114e9.1 si:dkey-114e9.1 233 0.995 - - - - 0.995 - - - -
81. CABZ01073954.1 CABZ01073954.1 258 0.995 - - - - 0.995 - - - -
82. zdhhc9 ENSDARG00000060515 981 0.995 - - - - 0.995 - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
83. tmem234 ENSDARG00000078333 488 0.995 - - - - 0.995 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
84. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.995 - - - - 0.995 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
85. bin2b ENSDARG00000010255 2649 0.994 - - - - 0.994 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
86. RNF214 RNF214 816 0.994 - - - - 0.994 - - - -
87. epc1 epc1 1164 0.994 - - - - 0.994 - - - -
88. ppip5k2 ENSDARG00000078441 1074 0.994 - - - - 0.994 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
89. trim24 ENSDARG00000103350 431 0.994 - - - - 0.994 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
90. nrg2a ENSDARG00000077818 854 0.994 - - - - 0.994 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
91. C3H16orf89 C3H16orf89 449 0.994 - - - - 0.994 - - - -
92. gabpb2a ENSDARG00000007943 1570 0.994 - - - - 0.994 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
93. slc4a2b ENSDARG00000052330 1900 0.993 - - - - 0.993 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
94. pds5b ENSDARG00000098897 1732 0.993 - - - - 0.993 - - - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
95. ERO1LB ERO1LB 1433 0.993 - - - - 0.993 - - - -
96. KIF4A KIF4A 3322 0.993 - - - - 0.993 - - - -
97. acvr2aa ENSDARG00000011188 1454 0.993 - - - - 0.993 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
98. RNF111 ENSDARG00000078802 1357 0.993 - - - - 0.993 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
99. pim3 ENSDARG00000055129 1517 0.993 - - - - 0.993 - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
100. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.993 - - - - 0.993 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]

There are 1850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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