Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rfc2

Gene Name Gene ID Reads Annotation
rfc2 ENSDARG00000014274 1533 replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]










Genes with expression patterns similar to rfc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfc2 ENSDARG00000014274 1533 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
2. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.31 0.710 - 0.771 - - - - 0.829 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
3. ahctf1 ENSDARG00000077530 2315 2.191 - - 0.707 - 0.708 - - 0.776 - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
4. dna2 ENSDARG00000078759 846 1.792 - - - - 0.857 - - 0.935 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
5. dnttip2 ENSDARG00000057648 2381 1.717 - 0.815 - - - - - 0.902 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
6. TMEM87B ENSDARG00000112581 798 1.715 - 0.781 - - - - - 0.934 - transmembrane protein 87B [Source:HGNC Symbol;Acc:HGNC:25913]
7. daxx ENSDARG00000000729 734 1.69 - - - 0.760 - - - 0.930 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
8. plxnb1b ENSDARG00000017211 4676 1.669 - - - - - - 0.751 0.918 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
9. smfn ENSDARG00000009806 1280 1.662 - 0.730 - - - - - 0.932 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
10. znf131 ENSDARG00000068400, ENSDARG00000110506 920 1.655 - - - - 0.737 - - 0.918 - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
11. CABZ01066717.1 CABZ01066717.1 351 1.633 - 0.702 - - - - - 0.931 -
12. si:dkey-19e4.5 ENSDARG00000089886 2562 1.625 - - - 0.794 - - - 0.831 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
13. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.624 - - 0.734 - - - - 0.890 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
14. rbb4 rbb4 15541 1.619 - - 0.759 - - - - 0.860 -
15. usp45 ENSDARG00000075013 227 1.617 - 0.717 - - - - - 0.900 - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
16. TMEM71 TMEM71 696 1.612 - 0.725 - - - - - 0.887 -
17. tmed4 ENSDARG00000024954 3476 1.598 - 0.785 - - - - - 0.813 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
18. srsf6b ENSDARG00000016783 9926 1.586 - - - 0.827 - - - 0.759 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
19. prmt1 ENSDARG00000010246 11311 1.582 - - 0.720 - - - - 0.862 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
20. smad4 smad4 2519 1.57 - 0.836 - - 0.734 - - - -
21. rb1 ENSDARG00000006782 1445 1.568 - - - - 0.708 - - 0.860 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
22. dcun1d2 dcun1d2 1721 1.558 - 0.845 - - - - 0.713 - -
23. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 1.556 - 0.793 - - - - - 0.763 - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
24. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.555 - 0.795 - 0.760 - - - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
25. pspc1 ENSDARG00000006621 966 1.546 - 0.812 - - - - - 0.734 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
26. ube2d2l ENSDARG00000099749 1462 1.541 - 0.838 - - - - - 0.703 - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
27. ncaph2 ENSDARG00000033757 1042 1.532 - - 0.716 - - - - 0.816 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
28. cntfr ENSDARG00000028661 1150 1.531 - - - 0.778 - 0.753 - - - ciliary neurotrophic factor receptor [Source:ZFIN;Acc:ZDB-GENE-030616-82]
29. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.526 - 0.810 - - 0.716 - - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
30. hnrnpa1 hnrnpa1 1302 1.51 - 0.766 - 0.744 - - - - -
31. kif22 ENSDARG00000102624 3694 1.508 - - 0.757 0.751 - - - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
32. cdca5 ENSDARG00000044437 2041 1.48 - 0.718 - - 0.762 - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
33. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.48 - 0.765 - - 0.715 - - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
34. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.474 - 0.773 - - - - - 0.701 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
35. mir21-1 606 1.473 - 0.713 - - - - - 0.760 - microRNA 21-1
36. pold1 ENSDARG00000027689 1148 1.466 - - - - - - 0.735 - 0.731 polymerase (DNA directed), delta 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060429-1]
37. ogt.2 1166 1.455 0.721 - 0.734 - - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
38. clasp2 ENSDARG00000020345 3382 1.441 - 0.740 - 0.701 - - - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
39. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.437 - - - 0.712 - - 0.725 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
40. tmpoa ENSDARG00000007315 3638 1.436 - - - 0.704 - - - 0.732 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
41. si:ch211-51h9.7 ENSDARG00000074720 227 1.435 - 0.704 - - 0.731 - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
42. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.433 - - - - 0.703 - - 0.730 - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
43. slco5a1 slco5a1 383 0.952 - - - - - - - 0.952 -
44. E2F2 E2F2 871 0.949 - - - - - - - 0.949 -
45. si:dkey-12e7.1 ENSDARG00000069328, ENSDARG00000109272 239 0.945 - - - - - - - 0.945 - si:dkey-12e7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-173]
46. ap2m1b ENSDARG00000033899 317 0.945 - - - - - - - 0.945 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
47. mtfr2 ENSDARG00000060394 482 0.942 - - - - - - - 0.942 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
48. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.939 - - - - - - - 0.939 - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
49. mier1a ENSDARG00000041072 1690 0.939 - - - - - - - 0.939 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
50. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.939 - - - - - - - 0.939 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
51. cldn5a ENSDARG00000043716 3865 0.939 - - - - - - - 0.939 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
52. vps18 ENSDARG00000070433 320 0.938 - - - - - - - 0.938 - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
53. celsr1b ENSDARG00000058259 1219 0.937 - - - - - - - 0.937 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
54. atp7a ENSDARG00000003699 476 0.936 - - - - - - - 0.936 - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
55. scg2b ENSDARG00000038574 345 0.936 - - - - - - - 0.936 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
56. gpr37l1a ENSDARG00000006079 422 0.936 - - - - - - - 0.936 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
57. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 0.936 - - - - - - - 0.936 - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
58. ZNF628 1104 0.935 - - - - - - - 0.935 - zinc finger protein 628, transcript variant X3
59. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.934 - - - - - - - 0.934 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
60. si:ch73-127m5.1 ENSDARG00000060680 253 0.934 - - - - - - - 0.934 - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
61. rlbp1a ENSDARG00000012504 111 0.934 - - - - - - - 0.934 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
62. glipr1b ENSDARG00000030078 73 0.933 - - - - - - - 0.933 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
63. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 0.932 - - - - - - - 0.932 - BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
64. MAST1_1 MAST1_1 1595 0.932 - - - - - - - 0.932 -
65. trps1 ENSDARG00000104082 918 0.932 - - - - - - - 0.932 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
66. pcyt1ba ENSDARG00000058162 206 0.931 - - - - - - - 0.931 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
67. CABZ01058048.1 CABZ01058048.1 268 0.931 - - - - - - - 0.931 -
68. ogfr ENSDARG00000037837 1001 0.93 - - - - - - - 0.930 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
69. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.93 - - - - - - - 0.930 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
70. WIZ WIZ 1188 0.93 - - - - - - - 0.930 -
71. rpp38 ENSDARG00000040350 558 0.929 - - - - - - - 0.929 - ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]
72. syt9a ENSDARG00000003994 298 0.929 - - - - - - - 0.929 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
73. utp3 ENSDARG00000056720 922 0.929 - - - - - - - 0.929 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
74. tgs1 190 0.929 - - - - - - - 0.929 - trimethylguanosine synthase 1, transcript variant X1
75. ZNF337_7 ZNF337_7 198 0.929 - - - - - - - 0.929 -
76. uso1 ENSDARG00000019581 479 0.928 - - - - - - - 0.928 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
77. CR847925.1 CR847925.1 835 0.928 - - - - - - - 0.928 -
78. znrd1 ENSDARG00000036070 684 0.927 - - - - - - - 0.927 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
79. hiat1b ENSDARG00000043055 757 0.927 - - - - - - - 0.927 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
80. emc9 ENSDARG00000034633 686 0.927 - - - - - - - 0.927 - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
81. ankrd10a ENSDARG00000037100 375 0.927 - - - - - - - 0.927 - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
82. CR352229.2 CR352229.2 784 0.926 - - - - - - - 0.926 -
83. ctnnal1 ENSDARG00000018162 747 0.926 - - - - - - - 0.926 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
84. pogza ENSDARG00000054778 1495 0.926 - - - - - - - 0.926 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
85. ccdc6b ENSDARG00000017595 828 0.926 - - - - - - - 0.926 - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
86. sec22c ENSDARG00000063387 203 0.925 - - - - - - - 0.925 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
87. nrxn2a ENSDARG00000061454 291 0.925 - - - - - - - 0.925 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
88. vhl ENSDARG00000070617 663 0.925 - - - - - - - 0.925 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
89. PBRM1 ENSDARG00000003877 225 0.925 - - - - - - - 0.925 - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
90. smoc2 ENSDARG00000088157 646 0.925 - - - - - - - 0.925 - SPARC related modular calcium binding 2 [Source:ZFIN;Acc:ZDB-GENE-021031-5]
91. WDR48 WDR48 448 0.925 - - - - - - - 0.925 -
92. inaa ENSDARG00000011862 115 0.924 - - - - - - - 0.924 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
93. dnase2 ENSDARG00000073893 141 0.924 - - - - - - - 0.924 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
94. ZBTB26 ENSDARG00000028949 129 0.924 - - - - - - - 0.924 - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
95. topbp1 ENSDARG00000059322 241 0.924 - - - - - - - 0.924 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
96. stap2a ENSDARG00000092810 591 0.924 - - - - - - - 0.924 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
97. ENGASE ENSDARG00000010035 232 0.923 - - - - - - - 0.923 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
98. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.923 - - - - - - - 0.923 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
99. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.923 - - - - - - - 0.923 - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
100. ENSDARG00000089986 ENSDARG00000089986 308 0.922 - - - - - - - 0.922 -

There are 1073 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA