Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rexo1

Gene Name Gene ID Reads Annotation
rexo1 ENSDARG00000026986 770 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]










Genes with expression patterns similar to rexo1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rexo1 ENSDARG00000026986 770 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
2. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 3.131 - - 0.881 0.711 - - 0.725 - 0.814 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
3. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.934 0.734 0.750 - - - - 0.703 0.747 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
4. srrm2 ENSDARG00000037965 1967 2.65 - - 0.952 0.950 - - - - 0.748 serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
5. gpm6bb ENSDARG00000001676 2005 2.528 - - 0.875 0.885 - - - - 0.768 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
6. marcksa ENSDARG00000004049 2518 2.495 - - - 0.860 - - 0.850 - 0.785 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
7. sema6a ENSDARG00000102165 1401 2.467 - - 0.981 - - - 0.722 - 0.764 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
8. fmnl2b ENSDARG00000075041 1744 2.455 - - 0.972 0.752 - - - - 0.731 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
9. st18 663 2.451 - - - 0.935 - - 0.766 - 0.750 suppression of tumorigenicity 18, zinc finger
10. kifap3a ENSDARG00000008639 721 2.425 0.813 0.745 - 0.867 - - - - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
11. ek1 ENSDARG00000020080 742 2.42 - - 0.987 - - - 0.705 - 0.728 eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
12. eif4h ENSDARG00000042252 6742 2.385 - - 0.792 0.796 - - - - 0.797 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
13. CLIP3 ENSDARG00000054456 734 2.352 - - - 0.913 - - - 0.711 0.728 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
14. fzd3a ENSDARG00000021664 1958 2.293 - 0.729 - - - - 0.744 - 0.820 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
15. golga7ba ENSDARG00000036295 1460 2.281 - - - 0.747 - - 0.739 - 0.795 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
16. nrarpb ENSDARG00000018958 6225 2.27 - 0.746 - - - - 0.776 - 0.748 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
17. her4.3 ENSDARG00000070770 613 2.197 - - - - - - 0.752 0.728 0.717 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
18. clvs2 ENSDARG00000053122 1390 2.131 - - - - - - 0.706 0.702 0.723 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
19. dpf2 ENSDARG00000012219 666 1.975 - - 0.986 0.989 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
20. xpc ENSDARG00000039754 515 1.96 - - 0.993 0.967 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
21. phf10 ENSDARG00000070084 1210 1.947 - - 0.984 0.963 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
22. dnajc5ab ENSDARG00000004836 2923 1.928 - - 0.981 0.947 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
23. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.921 - - 0.994 0.927 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
24. ubl3b ENSDARG00000021556 1210 1.836 - - 0.994 0.842 - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
25. C3H16orf13 C3H16orf13 652 1.833 - - 0.920 0.913 - - - - -
26. ddx27 ENSDARG00000091831 1471 1.799 - - 0.978 0.821 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
27. JMJD1C JMJD1C 289 1.797 - 0.811 - 0.986 - - - - -
28. CABZ01068153.1 CABZ01068153.1 211 1.79 0.792 - 0.998 - - - - - -
29. DLC1 ENSDARG00000079317 2149 1.778 - - 0.980 0.798 - - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
30. irf2a ENSDARG00000007387 915 1.773 - - 0.991 0.782 - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
31. si:dkey-66i24.9 ENSDARG00000096689 796 1.767 - - 0.987 - - - - - 0.780 si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
32. si:ch1073-127d16.1 ENSDARG00000087674 105 1.751 0.761 - - 0.990 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
33. CDKN1C CDKN1C 667 1.746 - - - 0.981 - - 0.765 - -
34. LDLRAD4 LDLRAD4 1237 1.74 - - - 0.898 - - - - 0.842
35. CDK5R1 CDK5R1 562 1.733 - - - 0.962 - - 0.771 - -
36. syngr3a ENSDARG00000014871 405 1.73 - - - 0.975 - - - 0.755 - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
37. pi4k2a ENSDARG00000033666 1257 1.724 - - 0.989 0.735 - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
38. CABZ01051991.1 CABZ01051991.1 346 1.72 - - - 0.969 - - 0.751 - -
39. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.72 - - 0.896 0.824 - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
40. SPTBN4_1 ENSDARG00000092624 473 1.72 - - - 0.973 - - - - 0.747 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
41. TUSC3 ENSDARG00000078854 1021 1.717 - - 0.993 - - - 0.724 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
42. creb1b ENSDARG00000093420 524 1.717 - - - 0.942 - - 0.775 - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
43. PCBP4 ENSDARG00000024276 3194 1.716 - - 0.980 - - - - - 0.736 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
44. rims2a ENSDARG00000101606 1088 1.716 - - - 0.979 - - 0.737 - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
45. ercc3 ENSDARG00000002402 340 1.716 - - - 0.973 - - 0.743 - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
46. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.714 - - 0.862 0.852 - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
47. RBM26 ENSDARG00000104130 1012 1.713 - - - 0.926 - - - - 0.787 RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
48. zgc:113348 ENSDARG00000103795 1351 1.709 - - 0.991 - - - 0.718 - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
49. ppie ENSDARG00000103234, ENSDARG00000111596 511 1.707 - 0.718 0.989 - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
50. syt3 ENSDARG00000075830 430 1.703 - - - 0.968 - - 0.735 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
51. UTP20 ENSDARG00000099280 1672 1.702 - - 0.971 - - - - - 0.731 UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
52. smg6 ENSDARG00000100481 493 1.701 - - 0.995 - - - 0.706 - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
53. safb ENSDARG00000020467 5608 1.701 - - 0.942 - - - - - 0.759 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
54. exd2 ENSDARG00000016117 342 1.7 - 0.735 - 0.965 - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
55. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.699 - - 0.925 - - - 0.774 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
56. ahi1 ENSDARG00000044056 951 1.696 - - 0.980 - - - 0.716 - - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
57. tor1 ENSDARG00000077950 1027 1.693 - - 0.981 - - - 0.712 - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
58. unc119b ENSDARG00000044362 1528 1.691 - - - 0.887 - - 0.804 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
59. rgs20 ENSDARG00000038859 331 1.691 0.767 - - 0.924 - - - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
60. adam23a ENSDARG00000062323 580 1.69 - - - 0.936 - - 0.754 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
61. trmt2b ENSDARG00000033967 127 1.687 0.703 - - 0.984 - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
62. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.684 - - - 0.896 - - - - 0.788 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
63. mgaa ENSDARG00000078784 1344 1.684 - - 0.981 - - - - - 0.703 MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
64. RSF1_2 RSF1_2 1343 1.675 - - 0.968 - - - - - 0.707
65. gpr98 gpr98 717 1.672 - - - 0.847 - - 0.825 - -
66. hif1an ENSDARG00000031915 2098 1.672 - - - 0.942 - - - - 0.730 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
67. plagx ENSDARG00000036855 3768 1.666 - - - 0.919 - - 0.747 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
68. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.663 - - 0.836 - - - - - 0.827 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
69. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.66 - - 0.940 - - - - - 0.720 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
70. nr2f1a ENSDARG00000052695 5037 1.659 - - 0.851 - - - - - 0.808 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
71. rbm25 rbm25 3629 1.656 - - 0.914 - - - - - 0.742
72. SHC3 ENSDARG00000098909 332 1.651 - - - 0.839 - - 0.812 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
73. si:dkey-56e3.3 ENSDARG00000075194 491 1.65 0.770 - - 0.880 - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
74. dnajc5aa ENSDARG00000042948 2885 1.649 - - 0.945 - - - 0.704 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
75. rnf165a ENSDARG00000077906 133 1.636 0.811 0.825 - - - - - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
76. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.632 - - - 0.869 - - 0.763 - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
77. si:ch211-10a23.2 ENSDARG00000060656 471 1.63 - - - 0.927 - - - - 0.703 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
78. dhx9 ENSDARG00000079725 1241 1.629 - - - 0.904 - - - - 0.725 DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
79. pou3f3a ENSDARG00000042032 2835 1.626 - - 0.920 - - - 0.706 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
80. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.623 - - - 0.900 - - 0.723 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
81. zswim5 ENSDARG00000055900 4243 1.619 - - 0.853 - - - - - 0.766 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
82. nes ENSDARG00000088805 2710 1.618 - - 0.880 - - - 0.738 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
83. bcl2_1 bcl2_1 1185 1.617 - - - 0.853 - - 0.764 - -
84. cdkn2d ENSDARG00000094176 190 1.616 0.761 0.855 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
85. ndrg4 ENSDARG00000103937 1234 1.613 - - - 0.830 - - - - 0.783 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
86. ttk ENSDARG00000041361 3911 1.599 - - 0.873 0.726 - - - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
87. metap1d ENSDARG00000019715, ENSDARG00000112086 236 1.596 - - - 0.875 - 0.721 - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
88. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.595 - - - 0.835 - - 0.760 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
89. TMEM17 ENSDARG00000116334 218 1.595 - - - - - 0.849 0.746 - - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
90. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.594 - - - - - - 0.814 - 0.780 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
91. CABZ01080568.2 CABZ01080568.2 2137 1.59 - - - 0.857 - - - - 0.733
92. tmem35 ENSDARG00000052567 5685 1.589 - - - - - - 0.751 - 0.838 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
93. C8H1orf106 C8H1orf106 2690 1.587 - - - 0.840 - - 0.747 - -
94. ptbp2b ENSDARG00000015901 2458 1.583 - - - - - - 0.793 - 0.790 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
95. hnrnpub ENSDARG00000004735 16496 1.578 - - - - - - 0.729 - 0.849 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
96. ZNF618 ENSDARG00000071469 2347 1.576 - - - 0.836 - - 0.740 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
97. lppr3a lppr3a 1294 1.576 - - - 0.840 - - - - 0.736
98. polr3a ENSDARG00000102569 1072 1.576 - 0.750 - 0.826 - - - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
99. zgc:91811 zgc:91811 186 1.574 0.817 0.757 - - - - - - -
100. plxna3 ENSDARG00000007172 1412 1.573 - - - 0.776 - - - - 0.797 plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]

There are 2018 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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