Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for retsatl

Gene Name Gene ID Reads Annotation
retsatl ENSDARG00000034989 41 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]










Genes with expression patterns similar to retsatl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. retsatl ENSDARG00000034989 41 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
2. si:dkey-264b2.3 19 2.577 - 0.884 0.730 - - 0.963 - - - si:dkey-264b2.3, transcript variant X2
3. PLCXD2 ENSDARG00000058200 8 2 - - - - - 1.000 - - 1.000 phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
4. C1S_1 C1S_1 11 2 - - - - - - 1.000 - 1.000
5. tuba7l ENSDARG00000104643 33 2 - - - - - - 1.000 - 1.000 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
6. BX323882.1 ENSDARG00000101656 2 2 - - - - - - 1.000 - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
7. CT030712.1 ENSDARG00000044355 83 1.991 - - - - - 0.991 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
8. DLK1 60 1.981 - - - - - 0.981 1.000 - - delta like non-canonical Notch ligand 1
9. PEG3_40 PEG3_40 186 1.94 - 0.963 - - - 0.977 - - -
10. ITIH4 ITIH4 9 1.921 - 0.921 - - - - 1.000 - -
11. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.918 - 0.932 - - - 0.986 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
12. GSC2 GSC2 3 1.911 - - - - - - 1.000 - 0.911
13. gstp2 ENSDARG00000103019 9 1.906 - 0.906 - - - - 1.000 - - glutathione S-transferase pi 2 [Source:ZFIN;Acc:ZDB-GENE-050601-1]
14. CABZ01062083.1 CABZ01062083.1 40 1.876 - - - - - 1.000 0.876 - -
15. syne3 ENSDARG00000023237 23 1.83 - - - - - - 1.000 - 0.830 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
16. mfsd6l ENSDARG00000014761 60 1.824 - 0.824 - - - - 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
17. dbpa ENSDARG00000063014 107 1.823 - 0.884 - - - 0.939 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
18. ODF3L2 40 1.822 - - - - - 0.910 0.912 - - outer dense fiber of sperm tails 3-like 2
19. stx17 ENSDARG00000006869 24 1.821 - - 0.821 - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
20. manba ENSDARG00000008238 25 1.807 - 0.807 - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
21. agxta ENSDARG00000052099 65 1.781 - 0.781 - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
22. tmem178 ENSDARG00000020758 77 1.776 - - - - - 0.776 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
23. CT030046.1 CT030046.1 190 1.756 - 0.906 - - - 0.850 - - -
24. msxe msxe 362 1.738 - - - - - 0.993 0.745 - -
25. CABZ01087853.1 CABZ01087853.1 3 1.733 - - - - - - 1.000 - 0.733
26. dcakd ENSDARG00000061638 120 1.73 - - - - 0.785 0.945 - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
27. CU638738.1 CU638738.1 131 1.712 - 0.762 - - - 0.950 - - -
28. LSM5 ENSDARG00000071573 371 1.708 - 0.856 - - - 0.852 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
29. ints3 ENSDARG00000016811 339 1.706 - 0.824 - - - 0.882 - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
30. traip ENSDARG00000011262 410 1.706 - 0.906 - - - 0.800 - - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
31. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.702 - 0.833 - - - 0.869 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
32. CT583625.2 ENSDARG00000094770 57 1.7 - - - - - 0.923 0.777 - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
33. C18H15orf26 C18H15orf26 36 1.699 - 0.881 - - - - 0.818 - -
34. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.686 - - - - - 0.966 0.720 - -
35. TULP3 TULP3 433 1.684 - 0.874 - - - 0.810 - - -
36. naif1 ENSDARG00000062753 176 1.675 - 0.769 - - - 0.906 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
37. CR388231.1 ENSDARG00000098710 153 1.673 - 0.783 - - - 0.890 - - -
38. tenm1 ENSDARG00000003403 148 1.672 - 0.810 - - - 0.862 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
39. fabp11a_1 ENSDARG00000017299 387 1.66 - 0.765 - - - 0.895 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
40. KCNK17 ENSDARG00000105453 16 1.651 - 0.906 - - - - 0.745 - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
41. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.645 - 0.908 - - - 0.737 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
42. si:dkey-270b7.1 si:dkey-270b7.1 83 1.641 - 0.704 - - - 0.937 - - -
43. si:dkey-220k22.3 ENSDARG00000094693 166 1.641 - - - - - 0.896 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
44. kcnn1b ENSDARG00000023546 152 1.635 - 0.823 - - - 0.812 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
45. ndst3 ENSDARG00000041776 605 1.632 - 0.746 - - - 0.886 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
46. KIF21A_1 KIF21A_1 237 1.63 - 0.723 - - - 0.907 - - -
47. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.627 - 0.878 - - - 0.749 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
48. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.626 - 0.906 - - - 0.720 - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
49. BACH1 BACH1 1021 1.606 - 0.824 - - - 0.782 - - -
50. WIPI1 ENSDARG00000040657 138 1.602 - 0.882 - - - - 0.720 - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
51. si:dkey-147f3.8 ENSDARG00000092166 28 1.593 - 0.882 - - - - 0.711 - - si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
52. nsmce1 ENSDARG00000098780 289 1.577 - 0.779 - - - 0.798 - - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
53. MEGF9_1 MEGF9_1 537 1.575 - 0.799 - - - 0.776 - - -
54. Mar-02_1 Mar-02_1 146 1.556 - 0.839 0.717 - - - - - -
55. ern1 ENSDARG00000013997 473 1.548 - 0.749 - - - 0.799 - - - endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
56. EML6 250 1.53 - 0.756 - - - 0.774 - - - echinoderm microtubule associated protein like 6
57. CABZ01066957.1 CABZ01066957.1 161 1.527 - 0.762 - - - 0.765 - - -
58. BAIAP2L2 BAIAP2L2 31 1.519 - - - - 0.714 - 0.805 - -
59. deptor ENSDARG00000040930 191 1.516 - 0.720 - - - 0.796 - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
60. CR759921.2 CR759921.2 583 1.513 - 0.763 - - - 0.750 - - -
61. ubxn2a ENSDARG00000087180 152 1.489 - 0.713 - - - 0.776 - - - UBX domain protein 2A [Source:ZFIN;Acc:ZDB-GENE-110411-202]
62. erfl3 ENSDARG00000062801 149 1.488 - 0.732 - - - 0.756 - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
63. tmem200a ENSDARG00000031540 52 1.472 - - 0.702 - - 0.770 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
64. PAXBP1 ENSDARG00000062361 626 1.463 - 0.706 - - - 0.757 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
65. OTOF OTOF 195 1.454 - 0.712 - - - 0.742 - - -
66. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
67. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
68. sdr42e1 ENSDARG00000098838 25 1 - - - - - 1.000 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
69. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
70. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
71. CR354540.1 ENSDARG00000004051 10 1 - - - - - - 1.000 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
72. si:ch211-30g3.4 si:ch211-30g3.4 3 1 - - - - - - - - 1.000
73. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - - - 1.000
74. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
75. CABZ01079192.1 ENSDARG00000101629 23 1 - - - - - 1.000 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
76. kcnh3 ENSDARG00000069560 4 1 - - - - - - - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
77. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
78. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
79. plxnd1 ENSDARG00000086057 2 1 - - - - - - - - 1.000 plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
80. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - - - - - - 1.000
81. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
82. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
83. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - - - - - - - 1.000 calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
84. U6_18 U6_18 12 1 - - - - - - 1.000 - -
85. zgc:110249 ENSDARG00000035221 68 1 - - - - - - 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
86. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - - - - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
87. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
88. CT573264.4 CT573264.4 2 1 - - - - - - - - 1.000
89. amn ENSDARG00000062947 36 1 - - - - - - 1.000 - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
90. BX119910.2 BX119910.2 2 1 - - - - - - - - 1.000
91. gpr153 ENSDARG00000087601 0 1 - - - - - - - - 1.000 G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
92. BX640584.1 ENSDARG00000100855 1 1 - - - - - - 1.000 - -
93. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
94. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
95. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
96. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
97. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - 1.000 - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
98. RNF122 RNF122 29 1 - - - - - - 1.000 - -
99. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
100. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]

There are 1924 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA