Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for retsatl

Gene Name Gene ID Reads Annotation
retsatl ENSDARG00000034989 41 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]










Genes with expression patterns similar to retsatl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. retsatl ENSDARG00000034989 41 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
2. si:dkey-264b2.3 19 2.577 - 0.884 0.730 - - 0.963 - - - si:dkey-264b2.3, transcript variant X2
3. tuba7l ENSDARG00000104643 33 2 - - - - - - 1.000 - 1.000 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
4. C1S_1 C1S_1 11 2 - - - - - - 1.000 - 1.000
5. PLCXD2 ENSDARG00000058200 8 2 - - - - - 1.000 - - 1.000 phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
6. BX323882.1 ENSDARG00000101656 2 2 - - - - - - 1.000 - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
7. CT030712.1 ENSDARG00000044355 83 1.991 - - - - - 0.991 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
8. DLK1 60 1.981 - - - - - 0.981 1.000 - - delta like non-canonical Notch ligand 1
9. PEG3_40 PEG3_40 186 1.94 - 0.963 - - - 0.977 - - -
10. ITIH4 ITIH4 9 1.921 - 0.921 - - - - 1.000 - -
11. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.918 - 0.932 - - - 0.986 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
12. GSC2 GSC2 3 1.911 - - - - - - 1.000 - 0.911
13. gstp2 ENSDARG00000103019 9 1.906 - 0.906 - - - - 1.000 - - glutathione S-transferase pi 2 [Source:ZFIN;Acc:ZDB-GENE-050601-1]
14. CABZ01062083.1 CABZ01062083.1 40 1.876 - - - - - 1.000 0.876 - -
15. syne3 ENSDARG00000023237 23 1.83 - - - - - - 1.000 - 0.830 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
16. mfsd6l ENSDARG00000014761 60 1.824 - 0.824 - - - - 1.000 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
17. dbpa ENSDARG00000063014 107 1.823 - 0.884 - - - 0.939 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
18. ODF3L2 40 1.822 - - - - - 0.910 0.912 - - outer dense fiber of sperm tails 3-like 2
19. stx17 ENSDARG00000006869 24 1.821 - - 0.821 - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
20. manba ENSDARG00000008238 25 1.807 - 0.807 - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
21. agxta ENSDARG00000052099 65 1.781 - 0.781 - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
22. tmem178 ENSDARG00000020758 77 1.776 - - - - - 0.776 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
23. CT030046.1 CT030046.1 190 1.756 - 0.906 - - - 0.850 - - -
24. msxe msxe 362 1.738 - - - - - 0.993 0.745 - -
25. CABZ01087853.1 CABZ01087853.1 3 1.733 - - - - - - 1.000 - 0.733
26. dcakd ENSDARG00000061638 120 1.73 - - - - 0.785 0.945 - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
27. CU638738.1 CU638738.1 131 1.712 - 0.762 - - - 0.950 - - -
28. LSM5 ENSDARG00000071573 371 1.708 - 0.856 - - - 0.852 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
29. ints3 ENSDARG00000016811 339 1.706 - 0.824 - - - 0.882 - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
30. traip ENSDARG00000011262 410 1.706 - 0.906 - - - 0.800 - - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
31. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.702 - 0.833 - - - 0.869 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
32. CT583625.2 ENSDARG00000094770 57 1.7 - - - - - 0.923 0.777 - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
33. C18H15orf26 C18H15orf26 36 1.699 - 0.881 - - - - 0.818 - -
34. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.686 - - - - - 0.966 0.720 - -
35. TULP3 TULP3 433 1.684 - 0.874 - - - 0.810 - - -
36. naif1 ENSDARG00000062753 176 1.675 - 0.769 - - - 0.906 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
37. CR388231.1 ENSDARG00000098710 153 1.673 - 0.783 - - - 0.890 - - -
38. tenm1 ENSDARG00000003403 148 1.672 - 0.810 - - - 0.862 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
39. fabp11a_1 ENSDARG00000017299 387 1.66 - 0.765 - - - 0.895 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
40. KCNK17 ENSDARG00000105453 16 1.651 - 0.906 - - - - 0.745 - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
41. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.645 - 0.908 - - - 0.737 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
42. si:dkey-270b7.1 si:dkey-270b7.1 83 1.641 - 0.704 - - - 0.937 - - -
43. si:dkey-220k22.3 ENSDARG00000094693 166 1.641 - - - - - 0.896 0.745 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
44. kcnn1b ENSDARG00000023546 152 1.635 - 0.823 - - - 0.812 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
45. ndst3 ENSDARG00000041776 605 1.632 - 0.746 - - - 0.886 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
46. KIF21A_1 KIF21A_1 237 1.63 - 0.723 - - - 0.907 - - -
47. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.627 - 0.878 - - - 0.749 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
48. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.626 - 0.906 - - - 0.720 - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
49. BACH1 BACH1 1021 1.606 - 0.824 - - - 0.782 - - -
50. WIPI1 ENSDARG00000040657 138 1.602 - 0.882 - - - - 0.720 - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
51. si:dkey-147f3.8 ENSDARG00000092166 28 1.593 - 0.882 - - - - 0.711 - - si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
52. nsmce1 ENSDARG00000098780 289 1.577 - 0.779 - - - 0.798 - - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
53. MEGF9_1 MEGF9_1 537 1.575 - 0.799 - - - 0.776 - - -
54. Mar-02_1 Mar-02_1 146 1.556 - 0.839 0.717 - - - - - -
55. ern1 ENSDARG00000013997 473 1.548 - 0.749 - - - 0.799 - - - endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
56. EML6 250 1.53 - 0.756 - - - 0.774 - - - echinoderm microtubule associated protein like 6
57. CABZ01066957.1 CABZ01066957.1 161 1.527 - 0.762 - - - 0.765 - - -
58. BAIAP2L2 BAIAP2L2 31 1.519 - - - - 0.714 - 0.805 - -
59. deptor ENSDARG00000040930 191 1.516 - 0.720 - - - 0.796 - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
60. CR759921.2 CR759921.2 583 1.513 - 0.763 - - - 0.750 - - -
61. ubxn2a ENSDARG00000087180 152 1.489 - 0.713 - - - 0.776 - - - UBX domain protein 2A [Source:ZFIN;Acc:ZDB-GENE-110411-202]
62. erfl3 ENSDARG00000062801 149 1.488 - 0.732 - - - 0.756 - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
63. tmem200a ENSDARG00000031540 52 1.472 - - 0.702 - - 0.770 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
64. PAXBP1 ENSDARG00000062361 626 1.463 - 0.706 - - - 0.757 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
65. OTOF OTOF 195 1.454 - 0.712 - - - 0.742 - - -
66. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - - - 1.000 si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
67. UHRF2_1 UHRF2_1 2 1 - - - - - - - - 1.000
68. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
69. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - - - - 1.000 islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
70. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
71. si:dkey-230i18.2 ENSDARG00000093532 0 1 - - - - - - 1.000 - - si:dkey-230i18.2 [Source:ZFIN;Acc:ZDB-GENE-070912-457]
72. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
73. si:dkey-6o1.2 si:dkey-6o1.2 12 1 - - - - - - 1.000 - -
74. grn1 ENSDARG00000089362 20 1 - - - - - - 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
75. zgc:171704 ENSDARG00000018048 14 1 - - - - - - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
76. DYNC1H1 ENSDARG00000014717 11 1 - - - - - - - - 1.000 dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
77. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - - - - - 1.000
78. TRIM35_1 TRIM35_1 11 1 - - - - - - 1.000 - -
79. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - - - 1.000
80. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
81. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
82. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
83. rictora ENSDARG00000100867 20 1 - - - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
84. her1 ENSDARG00000014722 29 1 - - - - - - 1.000 - - hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
85. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
86. CT573264.4 CT573264.4 2 1 - - - - - - - - 1.000
87. FYB FYB 3 1 - - - - - - - - 1.000
88. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 - - - - - 1.000 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
89. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
90. has1 ENSDARG00000042983 2 1 - - - - - - 1.000 - - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
91. ZNF557 ZNF557 1 1 - - - - - - - - 1.000
92. si:dkey-220o21.3 ENSDARG00000103079 1 1 - - - - - - 1.000 - - si:dkey-220o21.3 [Source:ZFIN;Acc:ZDB-GENE-110914-75]
93. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
94. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
95. dyx1c1 dyx1c1 36 1 - - - - - - - - 1.000
96. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
97. si:ch211-160d14.9 8 1 - - - - - - - - 1.000 si:ch211-160d14.9, transcript variant X1
98. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
99. CU062667.1 CU062667.1 4 1 - - - - - 1.000 - - -
100. BX649385.3 BX649385.3 1 1 - - - - - - - - 1.000

There are 1924 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA