Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ret

Gene Name Gene ID Reads Annotation
ret ENSDARG00000055305 700 ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]










Genes with expression patterns similar to ret

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ret ENSDARG00000055305 700 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
2. STMN3 ENSDARG00000038465 1009 2.311 - - - 0.731 - 0.731 0.849 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
3. iah1 ENSDARG00000015765 326 1.773 0.903 - - 0.870 - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
4. pacsin1b ENSDARG00000042128 1051 1.724 - - - - - 0.807 0.917 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
5. CU928222.1 ENSDARG00000097436 1662 1.709 - - - - - 0.811 0.898 - -
6. her15.2 her15.2 1701 1.708 0.826 - - - - - 0.882 - -
7. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.706 - - - - - 0.819 0.887 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
8. CBFA2T3 ENSDARG00000079012 6799 1.7 0.883 - - - - - 0.817 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
9. zgc:113531 ENSDARG00000038794 2063 1.687 - - - - - 0.851 0.836 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
10. irx1b ENSDARG00000056594 2224 1.682 - - - - - 0.782 0.900 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
11. bub3 ENSDARG00000075883 1333 1.671 0.856 - - - - - 0.815 - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
12. fam155a ENSDARG00000075858 91 1.67 0.899 - - - - - 0.771 - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
13. pvrl3l pvrl3l 943 1.665 0.913 - - - - - 0.752 - -
14. mnx2a ENSDARG00000042106 939 1.659 - - - - - 0.823 0.836 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
15. si:dkey-28b4.8 ENSDARG00000002840 1277 1.654 0.874 - - - - - 0.780 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
16. gdap1l1 ENSDARG00000028628 233 1.651 0.902 - - - - - 0.749 - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
17. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.648 0.791 - - - - - 0.857 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
18. nrarpb ENSDARG00000018958 6225 1.643 - - - - - 0.737 0.906 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
19. vezf1a ENSDARG00000008247 1449 1.643 - - - - - 0.713 0.930 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
20. ADAMTS3 ENSDARG00000060127 2839 1.63 - - - - - 0.802 0.828 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
21. si:ch73-265d7.2 ENSDARG00000116713 2142 1.626 - - - - - 0.777 0.849 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
22. hoxd10a ENSDARG00000057859 1498 1.626 0.901 - - - - - 0.725 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
23. pi4k2a ENSDARG00000033666 1257 1.623 0.820 0.803 - - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
24. CABZ01080599.2 CABZ01080599.2 192 1.622 - - - - - 0.740 0.882 - -
25. sema3d ENSDARG00000017369 212 1.617 0.897 0.720 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
26. TNRC6C_2 TNRC6C_2 2444 1.614 - - - - - 0.746 0.868 - -
27. isl1 ENSDARG00000004023 981 1.612 - - - - - 0.801 0.811 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
28. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.611 - - - - - 0.728 0.883 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
29. myt1b ENSDARG00000102879 5411 1.609 - - - - - 0.714 0.895 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
30. FP016176.1 FP016176.1 7030 1.609 - - - - - 0.712 0.897 - -
31. nkx6.1 ENSDARG00000022569 3779 1.609 - - - - - 0.745 0.864 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
32. chpf2 ENSDARG00000059961 679 1.606 0.841 - - - - 0.765 - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
33. nkx6.2 ENSDARG00000104735 5081 1.605 - - - - - 0.747 0.858 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
34. vim ENSDARG00000010008 3551 1.602 - - - - - 0.732 0.870 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
35. cldn5a ENSDARG00000043716 3865 1.6 - - - - - 0.748 0.852 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
36. gpr98 gpr98 717 1.597 - - - - - 0.736 0.861 - -
37. CABZ01088330.1 CABZ01088330.1 679 1.597 - - - - - 0.721 0.876 - -
38. tmie ENSDARG00000069423 305 1.595 - - - 0.747 - - 0.848 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
39. slc18a3a ENSDARG00000006356 1285 1.595 - - - - - 0.714 0.881 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
40. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.59 - - - 0.756 - - 0.834 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
41. ncana 1537 1.59 - - - - - 0.704 0.886 - - neurocan a
42. st8sia2 ENSDARG00000018788 2183 1.587 - - - - - 0.711 0.876 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
43. hectd2 ENSDARG00000061194 559 1.587 - - - - - 0.728 0.859 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
44. nes ENSDARG00000088805 2710 1.585 - - - - - 0.726 0.859 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
45. gad1b ENSDARG00000027419 440 1.585 - - - - - 0.785 0.800 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
46. pou3f3a ENSDARG00000042032 2835 1.585 - - - - - 0.702 0.883 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
47. hmgb3a ENSDARG00000056725 15668 1.583 - - - - - 0.729 0.854 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
48. hoxa5a ENSDARG00000102501 1667 1.582 - - - - - 0.808 0.774 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
49. si:dkey-169l5.3 si:dkey-169l5.3 239 1.58 - - - - - 0.704 0.876 - -
50. SLC5A7 SLC5A7 453 1.575 - - - - - 0.726 0.849 - -
51. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.573 - - - - - 0.721 0.852 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
52. nkain1 ENSDARG00000006859 1961 1.565 - - - - - 0.726 0.839 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
53. syncripl ENSDARG00000026723 3889 1.565 0.854 - - - - - 0.711 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
54. olig2 ENSDARG00000040946 1405 1.565 - - - - - 0.771 0.794 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
55. TMEM132E ENSDARG00000090830 1197 1.563 - - - - - 0.774 0.789 - - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
56. sv2c ENSDARG00000059997 592 1.56 - - - - - 0.730 0.830 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
57. ptprna ENSDARG00000058646 1327 1.555 - - - - - 0.700 0.855 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
58. sept5a ENSDARG00000013843 1206 1.553 - - - - - 0.748 0.805 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
59. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.549 - - - - - 0.741 0.808 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
60. tspan5a ENSDARG00000086033 1865 1.546 - - - - - 0.733 0.813 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
61. pou4f1 ENSDARG00000005559 821 1.533 - - - 0.728 - - 0.805 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
62. smad3b ENSDARG00000010207 951 1.533 - - - - - 0.777 0.756 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
63. wnt4a ENSDARG00000071208 1157 1.531 - - - - - 0.775 0.756 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
64. map7d2a ENSDARG00000068480 513 1.531 - - - - - 0.703 0.828 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
65. gpr186 ENSDARG00000094860 53 1.53 - - - 0.776 - - 0.754 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
66. CYTH2 ENSDARG00000028800 2349 1.53 - - - - - 0.702 0.828 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
67. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.523 - - - - - 0.745 0.778 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
68. tmtc2 tmtc2 798 1.523 - - - - - 0.788 0.735 - -
69. arhgef9a ENSDARG00000061746 58 1.52 - - - - - 0.702 0.818 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
70. ptprnb ENSDARG00000077047 2743 1.511 - - - - - 0.752 0.759 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
71. mir10d-1 mir10d-1 860 1.511 - - - - - 0.706 0.805 - -
72. PRIMA1 PRIMA1 459 1.509 - - - - - 0.752 0.757 - -
73. ctbp2 ctbp2 3255 1.509 - - - - - 0.753 0.756 - -
74. tmsb ENSDARG00000054911 6411 1.507 - - - - - 0.724 0.783 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
75. si:ch211-133l11.10 ENSDARG00000005626 381 1.506 - - - 0.768 - - 0.738 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
76. lhfpl4a ENSDARG00000111810 206 1.5 - - - - - 0.742 0.758 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
77. pkd2l1 ENSDARG00000022503 372 1.497 - - - - - 0.747 0.750 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
78. prdm12b ENSDARG00000007430 914 1.493 - - - - - 0.704 0.789 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
79. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.493 - - - - - 0.742 0.751 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
80. gad2 ENSDARG00000015537 724 1.492 - - - - - 0.748 0.744 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
81. b4galt2 ENSDARG00000077994 480 1.488 - - - - - 0.717 0.771 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
82. itm2ba ENSDARG00000007098 5686 1.484 0.773 0.711 - - - - - - - integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
83. cdkl1 ENSDARG00000017329 3345 1.475 - - - - - 0.773 0.702 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
84. sst1.1 ENSDARG00000040799 677 1.471 - - - - - 0.712 0.759 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
85. rad17 ENSDARG00000018918 332 1.467 - 0.740 - 0.727 - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
86. nrg1 ENSDARG00000104314 1081 1.466 - 0.717 - 0.749 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
87. hnrnpa3 ENSDARG00000059351 453 1.46 - - - - - 0.715 0.745 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
88. rnd1l rnd1l 984 1.454 - - - - - 0.735 0.719 - -
89. psma6a ENSDARG00000019398 2702 1.45 0.741 - - - - - 0.709 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
90. sema4e ENSDARG00000052997 607 1.444 - 0.712 - 0.732 - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
91. nr2f6b ENSDARG00000003165 5855 1.443 0.717 - - - - - 0.726 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
92. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.432 - - - - - 0.730 0.702 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
93. slit1a ENSDARG00000044954 3810 1.423 - - - - - 0.710 0.713 - - slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
94. clstn2 ENSDARG00000060637 548 1.421 - - - 0.710 - 0.711 - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
95. G3BP2_1 G3BP2_1 2390 1.418 0.712 0.706 - - - - - - -
96. sh3yl1 ENSDARG00000074393 815 0.939 0.939 - - - - - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
97. mex3b ENSDARG00000058369 1867 0.936 - - - - - - 0.936 - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
98. wnt10a ENSDARG00000017155 491 0.934 0.934 - - - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
99. rgs3b ENSDARG00000035132 876 0.934 0.934 - - - - - - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
100. tax1bp3 ENSDARG00000059177 4324 0.934 0.934 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]

There are 1572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA