Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rereb

Gene Name Gene ID Reads Annotation
rereb ENSDARG00000075670 136 arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]










Genes with expression patterns similar to rereb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rereb ENSDARG00000075670 136 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
2. gad2 ENSDARG00000015537 724 2.583 0.776 0.830 - - 0.977 - - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
3. zbtb20 ENSDARG00000005586 195 1.998 - 1.000 - - 0.998 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
4. CABZ01030107.1 ENSDARG00000058631 52 1.947 0.947 1.000 - - - - - - -
5. ENSDARG00000086878 ENSDARG00000086878 332 1.893 - 0.898 - - 0.995 - - - -
6. gng3 ENSDARG00000009553 2530 1.864 - 0.929 - - 0.935 - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
7. MTBP ENSDARG00000090447 174 1.773 - 0.784 - - 0.989 - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
8. pkd2l1 ENSDARG00000022503 372 1.772 0.871 0.901 - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
9. tpi1a ENSDARG00000025012 562 1.746 - - - - 0.989 - 0.757 - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
10. lef1 ENSDARG00000031894 492 1.745 - 0.797 - - 0.948 - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
11. cdh10 cdh10 38 1.73 - 1.000 0.730 - - - - - -
12. zgc:86725 2559 1.722 - 0.893 - - 0.829 - - - - zgc:86725
13. lgi2a ENSDARG00000111069 965 1.714 - 0.743 - - 0.971 - - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
14. CABZ01066439.2 CABZ01066439.2 5 1.705 0.705 1.000 - - - - - - -
15. zgc:113691 ENSDARG00000038898 36 1.705 0.705 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
16. uckl1a ENSDARG00000001686 21 1.705 0.705 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
17. BX469915.2 BX469915.2 48 1.705 0.705 1.000 - - - - - - -
18. cdk20 ENSDARG00000003867 27 1.705 0.705 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
19. espn ENSDARG00000076414 343 1.7 0.780 0.920 - - - - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
20. si:ch211-181p13.2 ENSDARG00000096484 94 1.699 - - - 0.704 0.995 - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
21. LMAN2L LMAN2L 555 1.688 - - - - 0.962 0.726 - - -
22. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.678 0.735 0.943 - - - - - - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
23. urp2 ENSDARG00000067781 85 1.636 0.884 0.752 - - - - - - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
24. mrpl40 ENSDARG00000043554 2198 1.595 - - - - 0.893 - 0.702 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
25. bco2b ENSDARG00000041715 13 1.594 0.705 0.889 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
26. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.545 - 0.788 - 0.757 - - - - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
27. si:ch73-173m3.3 si:ch73-173m3.3 425 1.526 0.783 - - - - - 0.743 - -
28. sema4ab ENSDARG00000062352 409 1.508 - 0.702 - - - 0.806 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
29. sfr1 ENSDARG00000021974 45 1.5 - - 0.786 - - - 0.714 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
30. hexa ENSDARG00000052113, ENSDARG00000111134 228 1.478 - - - 0.718 - 0.760 - - - hexosaminidase A (alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-050417-283]
31. zgc:110286 92 1.469 - - - - - - 0.705 - 0.764 zgc:110286
32. zgc:158654 19 1.466 0.705 - - - - - 0.761 - - zgc:158654, transcript variant X1
33. si:ch211-188i4.4 5 1.463 0.705 - - - - - - - 0.758 si:ch211-188i4.4, transcript variant X3
34. GPR156 ENSDARG00000086215 126 1.463 - 0.746 - - - - 0.717 - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
35. tenm1 ENSDARG00000003403 148 1.443 0.743 - - 0.700 - - - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
36. luzp2 ENSDARG00000068247 80 1.426 0.705 - - - - 0.721 - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
37. LPL ENSDARG00000087697 18 1.424 0.705 - - 0.719 - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
38. smarcd3b ENSDARG00000019969 11 1.409 0.705 - - 0.704 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
39. CABZ01061549.1 CABZ01061549.1 17 1.409 0.705 0.704 - - - - - - -
40. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
41. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
42. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
43. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
44. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
45. prdm14 ENSDARG00000045371 106 1 - 1.000 - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
46. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
47. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
48. CACNA2D1 ENSDARG00000073752 6 1 - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
49. sox12 ENSDARG00000025847 681 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
50. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
51. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
52. SRCIN1_1 SRCIN1_1 11 1 - 1.000 - - - - - - -
53. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
54. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
55. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
56. TGM1 ENSDARG00000017799 3 1 - 1.000 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
57. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
58. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
59. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - 1.000 - - - - - - -
60. AGO3 AGO3 12 1 - 1.000 - - - - - - -
61. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
62. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
63. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
64. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
65. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
66. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
67. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
68. U6_32 U6_32 0 1 - 1.000 - - - - - - -
69. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
70. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
71. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
72. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1 - 1.000 - - - - - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
73. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
74. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
75. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
76. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
77. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
78. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
79. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
80. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
81. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
82. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
83. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
84. HIST1H2BA ENSDARG00000116654 10 1 - 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
85. CU694445.1 ENSDARG00000111931 7 1 - 1.000 - - - - - - -
86. pif1 ENSDARG00000020289 216 1 - 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
87. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
88. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
89. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
90. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
91. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
92. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - 1.000 - - - - - - -
93. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
94. C14HXorf65 C14HXorf65 49 1 - 1.000 - - - - - - -
95. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
96. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
97. mir184 48 1 - 1.000 - - - - - - - microRNA 184
98. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
99. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
100. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7

There are 1238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA