Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rerea

Gene Name Gene ID Reads Annotation
rerea ENSDARG00000077353 4162 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]










Genes with expression patterns similar to rerea

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rerea ENSDARG00000077353 4162 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
2. pycr1 pycr1 1258 2.584 0.866 - - 0.994 - 0.724 - - -
3. tox4 tox4 1671 2.521 - 0.992 - - - 0.752 - - 0.777
4. CHD1 ENSDARG00000103787 1645 2.507 - 0.989 - - - - - 0.732 0.786 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
5. blcap ENSDARG00000052073 8646 2.499 - - - 0.993 - 0.803 0.703 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
6. EIF1B ENSDARG00000029445 5034 2.461 0.712 - - 0.997 - - - - 0.752 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
7. uhrf1 ENSDARG00000103409 3282 2.444 - - 0.900 - - 0.719 - - 0.825 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
8. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 2.44 0.810 - 0.806 - - - 0.824 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
9. erlin1 ENSDARG00000021991 5664 2.43 - 0.979 - - - 0.703 - - 0.748 ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
10. plcg1 ENSDARG00000038442 5324 2.376 - - 0.858 - - 0.719 - - 0.799 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
11. akirin2 ENSDARG00000058729 13245 2.376 0.857 - - - - 0.730 0.789 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
12. TNRC6B ENSDARG00000074161 2464 2.363 - - 0.858 - - - 0.707 - 0.798 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
13. golga7 ENSDARG00000057676 4691 2.361 0.869 - - - - 0.766 0.726 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
14. hnrnpk ENSDARG00000018914 8841 2.339 - 0.901 - - - - 0.732 0.706 - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
15. abi2b ENSDARG00000014875 2259 2.337 - - - - - 0.738 0.808 - 0.791 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
16. srsf6b ENSDARG00000016783 9926 2.328 - - - - - 0.750 0.771 - 0.807 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
17. ahctf1 ENSDARG00000077530 2315 2.326 0.809 - - - - 0.779 0.738 - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
18. magi1b ENSDARG00000003169 2056 2.318 0.829 - - - - 0.739 0.750 - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
19. tmem2 2572 2.31 - - - - - 0.781 0.802 - 0.727 transmembrane protein 2, transcript variant X1
20. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.301 - - 0.813 - - - - 0.701 0.787 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
21. ppp2r1a ppp2r1a 11291 2.287 - - - - - 0.705 0.827 - 0.755
22. snrnp70 ENSDARG00000077126 5921 2.281 0.700 - - - - 0.749 - - 0.832 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
23. her15.2 her15.2 1701 2.271 0.815 - - - - 0.733 - - 0.723
24. tp53bp2 tp53bp2 1969 2.259 - - - - - 0.779 0.768 0.712 -
25. lrrfip2 ENSDARG00000010400 2633 2.247 0.757 - 0.787 - - 0.703 - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
26. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 2.246 0.740 - 0.783 - - - - - 0.723 polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
27. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 2.24 - - - - - - 0.704 0.752 0.784 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
28. bag6 ENSDARG00000075892 3782 2.223 0.783 - - - - - 0.708 - 0.732 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
29. bub1bb ENSDARG00000074927 1667 2.212 - - 0.771 - - 0.739 0.702 - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
30. fermt2 ENSDARG00000020242 9351 1.919 - 0.925 - 0.994 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
31. si:ch211-218c6.8 ENSDARG00000092364 1270 1.879 0.887 0.992 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
32. etfa ENSDARG00000101631 2946 1.875 0.913 0.962 - - - - - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
33. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.866 0.872 - - 0.994 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
34. ankrd13c ENSDARG00000103831 3593 1.856 - 0.976 0.880 - - - - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
35. AMBRA1_1 AMBRA1_1 2179 1.851 - - - 0.997 - - 0.854 - -
36. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.834 - - - 0.989 - - 0.845 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
37. USO1 ENSDARG00000019581 1617 1.823 0.847 0.976 - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
38. SERBP1 SERBP1 9276 1.816 - - - 0.992 - 0.824 - - -
39. FP102272.1 FP102272.1 9473 1.814 0.864 0.950 - - - - - - -
40. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.81 0.821 0.989 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
41. map3k7 ENSDARG00000020469 2845 1.804 0.900 - 0.904 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
42. pi4kaa ENSDARG00000076724 1949 1.8 0.821 0.979 - - - - - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
43. ARHGAP23 ARHGAP23 3946 1.799 - - - 0.993 - 0.806 - - -
44. hsd17b14 ENSDARG00000054842 1394 1.799 - 0.988 0.811 - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
45. nkrf ENSDARG00000100536 1873 1.798 - - 0.802 0.996 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
46. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.789 - - - 0.994 - - - - 0.795 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
47. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.784 - 0.981 0.803 - - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
48. PSIP1 PSIP1 5252 1.783 - 0.975 - - - - - - 0.808
49. SH3D21 ENSDARG00000099448 1726 1.782 0.792 0.990 - - - - - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
50. pkd2 ENSDARG00000014098 2384 1.779 - 0.991 0.788 - - - - - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
51. tnfaip2a ENSDARG00000043416 688 1.777 - 0.986 0.791 - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
52. psma6a ENSDARG00000019398 2702 1.777 0.790 0.987 - - - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
53. arid1ab ENSDARG00000101891 1722 1.767 - 0.988 - - - 0.779 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
54. map3k1 ENSDARG00000098405 3043 1.763 - - - 0.994 - 0.769 - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
55. C3H19orf43 C3H19orf43 2961 1.759 - - - 0.997 - 0.762 - - -
56. ptbp3 ENSDARG00000043757 6760 1.756 - 0.988 - - - - 0.768 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
57. lamtor2 ENSDARG00000039872 3250 1.751 - 0.975 - - - 0.776 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
58. rbm4.3 ENSDARG00000022129 28571 1.75 - - - 0.926 - 0.824 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
59. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.75 - 0.986 0.764 - - - - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
60. tchp ENSDARG00000035605 1695 1.746 - - - 0.994 - 0.752 - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
61. cul4b ENSDARG00000060510 6053 1.744 - - - 0.990 - 0.754 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
62. tsc22d1 ENSDARG00000038306 2413 1.737 - 0.991 - - - - - - 0.746 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
63. prr12a ENSDARG00000074229 1668 1.735 - 0.989 - - - - - - 0.746 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
64. smc1al ENSDARG00000058203 8838 1.731 - - - 0.993 - - 0.738 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
65. igsf9a ENSDARG00000075864 1870 1.711 - 0.991 - - - 0.720 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
66. sar1b ENSDARG00000103403 1699 1.71 - 0.967 0.743 - - - - - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
67. spag7 ENSDARG00000011555 3224 1.704 - 0.974 - - - 0.730 - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
68. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.7 - 0.986 - - - - 0.714 - -
69. sumo3b ENSDARG00000035993 3414 1.699 0.907 - - - - - - - 0.792 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
70. nr2f1a ENSDARG00000052695 5037 1.699 - 0.978 - - - 0.721 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
71. ube2e2 ENSDARG00000034670 5918 1.699 - 0.991 - - - - 0.708 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
72. GABARAPL3 GABARAPL3 1198 1.699 - 0.984 - - - - 0.715 - -
73. ccng2 ENSDARG00000017602 3141 1.698 0.849 - 0.849 - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
74. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.697 0.705 - - 0.992 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
75. sp1 ENSDARG00000088347 1697 1.691 - 0.991 - - - 0.700 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
76. cnot3b ENSDARG00000019842 838 1.691 - 0.988 - - - - - - 0.703 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
77. rnf2 ENSDARG00000010381 3427 1.69 - 0.986 - - - 0.704 - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
78. sirt1 ENSDARG00000068064 1393 1.689 - 0.988 - - - 0.701 - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
79. ndrg3a ENSDARG00000013087 5581 1.675 - 0.863 - - - 0.812 - - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
80. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.673 0.850 - 0.823 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
81. RNF5 ENSDARG00000075606 1730 1.672 0.902 - - - - 0.770 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
82. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.665 - - - - - 0.870 - 0.795 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
83. rap2c ENSDARG00000015649 4709 1.664 - 0.926 0.738 - - - - - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
84. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.659 0.870 - - - - 0.789 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
85. psma4 ENSDARG00000045928 5112 1.657 0.798 - - - - 0.859 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
86. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.657 0.880 - - - - 0.777 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
87. snrpc ENSDARG00000009871 9567 1.655 - 0.943 - - - - - 0.712 - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
88. paip2b ENSDARG00000008706 4255 1.654 0.846 - 0.808 - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
89. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.651 - 0.943 - - - - - - 0.708 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
90. mllt4 mllt4 2939 1.643 0.835 - - - - - 0.808 - -
91. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.64 - - 0.896 - - - - - 0.744 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
92. syncripl ENSDARG00000026723 3889 1.64 0.859 - - - - - - - 0.781 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
93. sf1 ENSDARG00000008188 5142 1.64 - - - - - 0.899 0.741 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
94. lmnb1 ENSDARG00000044299 9817 1.638 0.836 - - - - - 0.802 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
95. rbbp6 ENSDARG00000037919 4813 1.635 - 0.801 - - - - - - 0.834 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
96. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.634 - - - - - 0.851 0.783 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
97. acin1b ENSDARG00000026842 3806 1.632 - - 0.856 - - - 0.776 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
98. klf11a ENSDARG00000030844 3972 1.632 - 0.930 - - - - - - 0.702 Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
99. polr2d ENSDARG00000076509 3386 1.63 0.855 - - - - - 0.775 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
100. llgl1 ENSDARG00000009693 4205 1.627 0.824 - - - - - - - 0.803 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]

There are 1899 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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