Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rer1

Gene Name Gene ID Reads Annotation
rer1 ENSDARG00000012747 6939 retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]










Genes with expression patterns similar to rer1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rer1 ENSDARG00000012747 6939 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
2. pdlim1 ENSDARG00000019845 5765 3.191 0.714 - - - 0.964 0.723 0.790 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
3. s100v1 ENSDARG00000070427 6633 2.536 - 0.969 - - - 0.719 0.848 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
4. spcs1 ENSDARG00000059298 5327 2.42 - - - - 0.971 0.731 0.718 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
5. arcn1b ENSDARG00000031214 4529 2.418 0.734 - - - 0.972 0.712 - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
6. zgc:56493 ENSDARG00000031435 33407 2.331 - 0.779 - - - 0.781 0.771 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
7. rfx1b ENSDARG00000075904 1175 2.236 - - - 0.759 - 0.759 0.718 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
8. zgc:56530 zgc:56530 6300 2.213 0.716 - - - - 0.709 0.788 - -
9. HIPK1_1 HIPK1_1 8096 2.213 - - - - - 0.733 0.758 - 0.722
10. eif4a3 ENSDARG00000102978 16162 1.915 - 0.988 - - 0.927 - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
11. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.868 - - - - 0.960 - 0.908 - - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
12. CABZ01013938.1 CABZ01013938.1 4497 1.757 - - - - 0.916 - 0.841 - -
13. plscr3b ENSDARG00000069432 8500 1.742 - 0.989 - - - - 0.753 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
14. ARHGEF5 2727 1.734 - - - - 0.968 - 0.766 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
15. gpm6ab ENSDARG00000004621 5825 1.729 - - - - 0.958 0.771 - - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
16. arf1 ENSDARG00000009484 5034 1.722 - - - - - 0.828 0.894 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
17. nfe2l3 ENSDARG00000019810 3682 1.712 - 0.984 - - - 0.728 - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
18. fam89a ENSDARG00000079979 4375 1.696 0.733 - - - 0.963 - - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
19. hnrnph1l ENSDARG00000005551 8727 1.692 - 0.985 - 0.707 - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
20. krt17 ENSDARG00000094041 7683 1.69 0.843 - - - - - 0.847 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
21. acsf2 ENSDARG00000061201 4413 1.686 0.700 0.986 - - - - - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
22. nup133 ENSDARG00000010078 2373 1.686 - 0.984 - 0.702 - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
23. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.686 - 0.983 - - - - - - 0.703 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
24. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.683 - - - - 0.925 - 0.758 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
25. fam32al fam32al 5716 1.682 - - - - 0.937 - - - 0.745
26. C6H2orf40 C6H2orf40 4224 1.673 - - - - 0.968 0.705 - - -
27. dld ENSDARG00000020219 4928 1.667 - - - - 0.938 - - - 0.729 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
28. hoga1 ENSDARG00000018944 800 1.651 0.888 - - - - - 0.763 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
29. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.649 0.844 - - - - - 0.805 - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
30. arf1l arf1l 9119 1.648 0.873 - - - - - 0.775 - -
31. atp6v1d ENSDARG00000011175 8331 1.647 0.726 - - - 0.921 - - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
32. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.645 - - - - 0.927 0.718 - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
33. cbx5 ENSDARG00000061187 24026 1.637 - - - - 0.821 - 0.816 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
34. si:dkey-42i9.4 ENSDARG00000008049 4752 1.635 - - - 0.729 0.906 - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
35. gpd1b ENSDARG00000043180 6002 1.631 0.790 - - - - - 0.841 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
36. btbd10b ENSDARG00000020252 7251 1.63 - - - - - 0.840 0.790 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
37. sec23b ENSDARG00000019360 6210 1.619 0.830 - - - - - 0.789 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
38. ppl ENSDARG00000101043 9196 1.617 - - - - - 0.772 0.845 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
39. ATOX1 ENSDARG00000087693 4016 1.615 - - - - - 0.786 0.829 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
40. soul2 ENSDARG00000039499 1469 1.604 0.776 - - - - 0.828 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
41. adam10a ENSDARG00000053468 9308 1.596 - - - - - 0.754 0.842 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
42. CABZ01092303.1 CABZ01092303.1 8825 1.596 - - - - 0.863 - 0.733 - -
43. tet3 ENSDARG00000062646 6672 1.593 - - - - - 0.765 0.828 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
44. rac2 ENSDARG00000038010 5837 1.592 - - - - - 0.736 0.856 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
45. ensab ENSDARG00000061644 2436 1.587 - - - - - 0.792 0.795 - - endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
46. smox ENSDARG00000036967 3816 1.586 0.769 - - - - - 0.817 - - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
47. ambp ENSDARG00000004296, ENSDARG00000112731 1305 1.58 0.859 - - - - - 0.721 - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
48. inhbb ENSDARG00000040777 2141 1.579 - - - 0.835 - - 0.744 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
49. magt1 ENSDARG00000058062 3903 1.575 - - - - - 0.795 0.780 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
50. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.575 - - - - - 0.764 0.811 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
51. sult2st1_1 ENSDARG00000033170 3074 1.572 - - - - - 0.738 0.834 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
52. wls ENSDARG00000009534 8719 1.571 - - - - 0.808 - 0.763 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
53. cnn2 ENSDARG00000035858 18201 1.565 - - - - - 0.741 0.824 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
54. CU929307.1 ENSDARG00000102297 900 1.561 - - - - - 0.783 0.778 - -
55. actr2a ENSDARG00000052438 5838 1.56 - - - - - 0.729 0.831 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
56. msxc msxc 3142 1.56 - - - - - 0.807 0.753 - -
57. gm2a ENSDARG00000088439 5387 1.557 0.816 - - - - - 0.741 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
58. c1galt1c1 ENSDARG00000036335 1623 1.557 - - - - - 0.712 0.845 - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
59. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.554 - - - - - 0.730 0.824 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
60. cxcr7b cxcr7b 2482 1.552 - - - 0.731 - - 0.821 - -
61. rrbp1a ENSDARG00000013763 4723 1.544 - - - - - 0.759 0.785 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
62. pfn1 ENSDARG00000088091 71242 1.54 0.725 - - - - - 0.815 - - profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
63. abat ENSDARG00000006031 2143 1.539 0.726 - - - - - 0.813 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
64. FP067396.1 FP067396.1 32149 1.533 0.807 0.726 - - - - - - -
65. glula ENSDARG00000099776 14156 1.533 - 0.826 - - - - 0.707 - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
66. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.529 - - - - - 0.811 0.718 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
67. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.528 - - - - - - 0.812 - 0.716 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
68. gmfb ENSDARG00000028327 6522 1.527 - - - 0.772 - 0.755 - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
69. bnip3la ENSDARG00000025468 3097 1.526 - - - 0.714 - - 0.812 - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
70. gnmt ENSDARG00000006840 2422 1.526 - - - - - 0.764 0.762 - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
71. bcap31 ENSDARG00000044972 8708 1.526 0.718 - - - - - 0.808 - - B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
72. cldnb ENSDARG00000009544 6036 1.514 - - - - - 0.707 0.807 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
73. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.513 - - - - - 0.709 0.804 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
74. zgc:113442 ENSDARG00000101906 3092 1.504 0.735 - - - - - 0.769 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
75. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.502 0.717 - - - - - 0.785 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
76. id3 ENSDARG00000054823 3484 1.502 0.773 - - - - 0.729 - - - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
77. eif2s2 ENSDARG00000053047 15904 1.501 - 0.763 - - - - - - 0.738 eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
78. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 1.5 - 0.748 0.752 - - - - - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
79. pdip5 pdip5 2643 1.497 - - - - - 0.733 0.764 - -
80. gabarapl2 ENSDARG00000027200 5120 1.496 - - - - - 0.766 0.730 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
81. shc1 ENSDARG00000075437 3278 1.495 - - - - - 0.712 0.783 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
82. ufc1 ENSDARG00000022340 2618 1.494 - - - - - 0.779 0.715 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
83. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.491 - - - - - 0.784 0.707 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
84. commd7 ENSDARG00000036784, ENSDARG00000111683 997 1.485 - - - 0.709 - - 0.776 - - COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
85. chmp1a ENSDARG00000102643 1078 1.484 - - - 0.702 - - 0.782 - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
86. bckdk ENSDARG00000016904 3775 1.482 - - - - - 0.756 0.726 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
87. aim1b 1360 1.479 - - - - - 0.717 0.762 - - crystallin beta-gamma domain containing 1b
88. msxb msxb 2650 1.473 0.746 - - - - - 0.727 - -
89. MTUS1 MTUS1 1334 1.473 - - - - - 0.730 0.743 - -
90. itgb4 ENSDARG00000028507 2568 1.47 - - - - - 0.753 0.717 - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
91. si:ch211-233g6.8 si:ch211-233g6.8 1005 1.465 - - - - - 0.756 0.709 - -
92. anp32a ENSDARG00000006487 28249 1.464 - - - - - 0.732 0.732 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
93. tbca ENSDARG00000016754 6427 1.456 0.707 - - 0.749 - - - - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
94. snx6 ENSDARG00000058444 2645 1.454 - - - 0.734 - - - - 0.720 sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]
95. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.452 - 0.705 - - - - - - 0.747 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
96. tmem18 ENSDARG00000036704 1784 1.448 - - - - - 0.714 0.734 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
97. nrip1b ENSDARG00000068894 2699 1.447 - - - - - 0.705 0.742 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
98. si:ch211-157c3.4 ENSDARG00000087093 22736 1.446 - 0.731 - - - - 0.715 - - si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
99. ssr4 ENSDARG00000019444 20207 1.439 - 0.714 - - - - 0.725 - - signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
100. atp6v0ca ENSDARG00000057853 23277 1.438 0.723 - - - - - 0.715 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]

There are 1115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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