Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rdh8a

Gene Name Gene ID Reads Annotation
rdh8a ENSDARG00000028048 334 retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]










Genes with expression patterns similar to rdh8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rdh8a ENSDARG00000028048 334 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
2. msxd msxd 1750 2.31 0.717 0.815 - 0.778 - - - - -
3. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 2.244 - - - - - - 0.748 0.727 0.769 family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
4. cebpd ENSDARG00000087303 2195 2.207 - 0.733 - 0.701 - - - - 0.773 CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
5. rxrab ENSDARG00000035127 231 1.756 - 0.938 - 0.818 - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
6. caprin2 ENSDARG00000020749 39 1.729 - 0.919 - - - - 0.810 - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
7. nudt15 ENSDARG00000113961 381 1.717 - 0.841 - - - 0.876 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
8. SLC22A15 ENSDARG00000055445 111 1.694 0.766 0.928 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
9. CT573468.1 CT573468.1 283 1.684 - - - 0.871 - - 0.813 - -
10. tmem178b ENSDARG00000006747 173 1.666 0.883 - - - - 0.783 - - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
11. wdyhv1 ENSDARG00000070403 42 1.655 - 0.944 - - 0.711 - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
12. si:dkey-61l1.4 ENSDARG00000092567 1012 1.643 0.795 0.848 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
13. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.626 - - - 0.858 - - 0.768 - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
14. gpr173 ENSDARG00000042922 238 1.621 - 0.921 - - - 0.700 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
15. rft1 ENSDARG00000060398 146 1.614 - - - 0.822 - - 0.792 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
16. fam26e fam26e 211 1.614 - - - 0.792 - - - - 0.822
17. zgc:66443 ENSDARG00000057707 624 1.608 - 0.781 - - - - - - 0.827 zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
18. ank3a ENSDARG00000061736 361 1.594 0.705 0.889 - - - - - - - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
19. tmem141 ENSDARG00000101963 513 1.591 - 0.803 - - - - - - 0.788 transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
20. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.582 - - - 0.817 - - 0.765 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
21. zgc:56585 ENSDARG00000026236 704 1.573 - 0.730 - 0.843 - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
22. SLC41A2 SLC41A2 202 1.573 - 0.862 - - - - 0.711 - -
23. hivep1 ENSDARG00000103658 345 1.556 0.776 - - 0.780 - - - - - human immunodeficiency virus type I enhancer binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512]
24. CABZ01072096.1 ENSDARG00000079483 168 1.553 - - 0.756 0.797 - - - - -
25. adhfe1 ENSDARG00000053518 499 1.544 - 0.737 - 0.807 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
26. vrk3 ENSDARG00000036056 424 1.541 - 0.838 - - - - 0.703 - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
27. h1m ENSDARG00000102892 319 1.539 0.740 - - - - - 0.799 - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
28. scp2b ENSDARG00000102356 951 1.528 - 0.746 - - - - 0.782 - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
29. CR788316.4 ENSDARG00000105829 297 1.515 - - - 0.753 - - 0.762 - - neoverrucotoxin subunit beta-like [Source:NCBI gene;Acc:100004951]
30. haus7 ENSDARG00000037432, ENSDARG00000112118 820 1.494 - 0.792 - - - - 0.702 - - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
31. C18H15orf59 C18H15orf59 80 1.477 - - - - - 0.704 0.773 - -
32. stk3 ENSDARG00000011312, ENSDARG00000115118 460 1.461 - - - 0.738 - - 0.723 - - serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]
33. arhgef1a ENSDARG00000040380 239 1.433 - 0.732 - - - 0.701 - - - Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]
34. pls3 ENSDARG00000037655 5175 1.407 - 0.702 - 0.705 - - - - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
35. dre-mir-222a ENSDARG00000090347 131 0.98 - 0.980 - - - - - - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
36. bmp7a ENSDARG00000018260 92 0.978 - 0.978 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
37. irf2a ENSDARG00000007387 915 0.969 - 0.969 - - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
38. si:dkey-162h11.3 41 0.954 - 0.954 - - - - - - - si:dkey-162h11.3, transcript variant X2
39. slc6a13l 121 0.952 - 0.952 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
40. CR354432.1 CR354432.1 424 0.951 - 0.951 - - - - - - -
41. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.951 - 0.951 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
42. CYP27B1 ENSDARG00000045015 119 0.95 - 0.950 - - - - - - - cytochrome P450, family 27, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-111005-2]
43. C17H2orf43 C17H2orf43 379 0.95 - 0.950 - - - - - - -
44. TC2N ENSDARG00000095067 146 0.948 - 0.948 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
45. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.947 - 0.947 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
46. BX004816.4 BX004816.4 33 0.947 - 0.947 - - - - - - -
47. dio2 ENSDARG00000094857 17 0.947 - 0.947 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
48. grip2b ENSDARG00000027618 9 0.947 - 0.947 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
49. SNORA53 SNORA53 10 0.947 - 0.947 - - - - - - -
50. slc43a3b ENSDARG00000057949 194 0.947 - 0.947 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
51. dpt ENSDARG00000056178 7 0.947 - 0.947 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
52. zgc:92326 zgc:92326 94 0.947 - 0.947 - - - - - - -
53. tirap ENSDARG00000074371 10 0.947 - 0.947 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
54. tmprss13a ENSDARG00000100969 84 0.947 - 0.947 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
55. GPR97 GPR97 9 0.947 - 0.947 - - - - - - -
56. si:ch211-284e13.4 ENSDARG00000060330 6 0.947 - 0.947 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
57. si:dkey-192i18.3 si:dkey-192i18.3 47 0.947 - 0.947 - - - - - - -
58. CABZ01081656.1 CABZ01081656.1 14 0.947 - 0.947 - - - - - - -
59. si:dkey-173l11.3 si:dkey-173l11.3 14 0.947 - 0.947 - - - - - - -
60. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.947 - 0.947 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
61. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.947 - 0.947 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
62. klhdc8b ENSDARG00000090787 33 0.947 - 0.947 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
63. CU929163.1 CU929163.1 11 0.947 - 0.947 - - - - - - -
64. elavl2 ENSDARG00000040732 44 0.947 - 0.947 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
65. sdk1a ENSDARG00000078866 159 0.947 - 0.947 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
66. GFRAL ENSDARG00000089709 167 0.946 - 0.946 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
67. gng8 ENSDARG00000042970 117 0.945 - 0.945 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
68. si:ch211-255g12.8 ENSDARG00000069627 22 0.944 - 0.944 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
69. kat6a ENSDARG00000018907 250 0.944 - 0.944 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
70. CU855953.1 CU855953.1 137 0.944 - 0.944 - - - - - - -
71. si:ch211-236p5.2 ENSDARG00000086256 8 0.944 - 0.944 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
72. mettl6 ENSDARG00000070085 366 0.943 - 0.943 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
73. stk38l ENSDARG00000045482 266 0.943 - 0.943 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
74. zgc:152938 ENSDARG00000102586 97 0.942 - 0.942 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
75. tctex1d2 ENSDARG00000054255 320 0.942 - 0.942 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
76. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.942 - 0.942 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
77. CR790363.1 ENSDARG00000097364 145 0.941 - 0.941 - - - - - - -
78. si:ch1073-228j22.1 ENSDARG00000095799 98 0.941 - 0.941 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
79. ccl25b ENSDARG00000070873 454 0.941 - 0.941 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
80. sfmbt2 ENSDARG00000045519 251 0.941 - 0.941 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
81. si:ch211-214e3.5 ENSDARG00000074270 755 0.941 - 0.941 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
82. TNFRSF11B ENSDARG00000098377 98 0.941 - 0.941 - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
83. plekha3 ENSDARG00000056601 213 0.94 - 0.940 - - - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
84. cry1b cry1b 152 0.94 - 0.940 - - - - - - -
85. btbd9 ENSDARG00000068983 356 0.939 - 0.939 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
86. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.938 - 0.938 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
87. ttpal ENSDARG00000070644, ENSDARG00000112925 471 0.937 - 0.937 - - - - - - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
88. nkx2.2b ENSDARG00000101549 266 0.936 - 0.936 - - - - - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
89. CR925758.1 CR925758.1 83 0.936 - 0.936 - - - - - - -
90. itsn1 ENSDARG00000000086 684 0.936 - 0.936 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
91. cdx1a ENSDARG00000114554 28 0.935 - 0.935 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
92. ddrgk1_1 ENSDARG00000037172 1563 0.935 - 0.935 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
93. zgc:171779 ENSDARG00000016908 26 0.934 - 0.934 - - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
94. fam83b ENSDARG00000078309 318 0.934 - 0.934 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
95. ptpn3 ENSDARG00000055784 436 0.933 - 0.933 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
96. entpd2a.2 ENSDARG00000033953 389 0.932 - 0.932 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
97. acaa1 ENSDARG00000004687 557 0.931 - 0.931 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
98. im:7160159 im:7160159 294 0.931 0.931 - - - - - - - -
99. si:ch211-13o20.3 si:ch211-13o20.3 113 0.93 - 0.930 - - - - - - -
100. rbm22 ENSDARG00000010238 523 0.929 - 0.929 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]

There are 1136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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