Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rdh5

Gene Name Gene ID Reads Annotation
rdh5 ENSDARG00000008306 272 retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]










Genes with expression patterns similar to rdh5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rdh5 ENSDARG00000008306 272 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
2. TNC ENSDARG00000021948, ENSDARG00000113518 223 2.646 0.884 - - - - 0.814 0.948 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
3. zgc:100868 ENSDARG00000004748 2582 2.361 0.868 - - - - 0.763 0.730 - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
4. dgat1a ENSDARG00000103503 63 1.93 0.968 - - - - 0.962 - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
5. esrrgb ENSDARG00000011696 108 1.897 0.952 - - - - 0.945 - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
6. gpr78 gpr78 135 1.828 0.970 - - - - 0.858 - - -
7. plekhf2 ENSDARG00000021141 529 1.795 0.867 - - - - 0.928 - - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
8. si:ch211-209a2.1 250 1.774 0.955 - - - - 0.819 - - - si:ch211-209a2.1, transcript variant X2
9. acot11b ENSDARG00000042122 235 1.762 0.899 - - - - 0.863 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
10. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 1.758 0.970 - - - - 0.788 - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
11. si:dkey-58f10.12 ENSDARG00000092680 258 1.736 0.971 - - - - - 0.765 - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
12. slmapa ENSDARG00000054458 966 1.729 0.873 - - - - 0.856 - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
13. pold3 ENSDARG00000076169 694 1.726 0.954 - - - - 0.772 - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
14. prkci ENSDARG00000021225 2472 1.725 0.947 - - - - - 0.778 - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
15. gusb ENSDARG00000063126 867 1.718 0.932 - - - - 0.786 - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
16. C22H19orf26 C22H19orf26 66 1.696 0.957 0.739 - - - - - - -
17. zgc:193682 zgc:193682 15 1.695 - - - - - 0.990 0.705 - -
18. SYTL1 ENSDARG00000070094 282 1.671 - - - - - 0.960 0.711 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
19. s100z ENSDARG00000038729 442 1.651 0.890 - - - - - 0.761 - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
20. cyp2aa9 ENSDARG00000098890 839 1.649 0.877 - - - - - 0.772 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
21. PROZ PROZ 288 1.646 0.829 - - - - - 0.817 - -
22. si:dkeyp-1h4.6 ENSDARG00000093936 841 1.639 0.935 - - - - - - - 0.704 si:dkeyp-1h4.6 [Source:ZFIN;Acc:ZDB-GENE-060503-841]
23. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.635 0.887 - - - - - 0.748 - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
24. CABZ01073174.1 CABZ01073174.1 581 1.627 0.891 - - - - 0.736 - - -
25. anxa5b ENSDARG00000016470 2934 1.62 0.829 - - - - - 0.791 - - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
26. IER2 IER2 604 1.604 0.749 - - - - 0.855 - - -
27. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.603 0.833 - - - - 0.770 - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
28. itm2bb ENSDARG00000041505 2734 1.603 0.728 - - - - - 0.875 - - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
29. kcnj1a.5 ENSDARG00000089060 617 1.6 0.862 - 0.738 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
30. BX649498.2 BX649498.2 40 1.574 - - 0.772 - - 0.802 - - -
31. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.567 0.754 - - - - - 0.813 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
32. stx2b ENSDARG00000068217 2567 1.566 0.819 - - - - - 0.747 - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
33. rab5c ENSDARG00000026712 4733 1.558 0.848 - - - - - 0.710 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
34. emc7 ENSDARG00000012144 1608 1.539 0.761 - - - - - 0.778 - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
35. adrb2a ENSDARG00000088124 324 1.519 - - - - - 0.761 0.758 - - adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3]
36. ptk2bb ENSDARG00000039577 776 1.519 - - - - - 0.713 0.806 - - protein tyrosine kinase 2 beta, b [Source:ZFIN;Acc:ZDB-GENE-020507-1]
37. srsf9 ENSDARG00000008097 2405 1.518 0.801 - - - - 0.717 - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
38. GPA33 2465 1.514 0.742 - - - - - 0.772 - - glycoprotein A33 (transmembrane)
39. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.506 - - - - - 0.768 0.738 - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
40. mst1 ENSDARG00000103308 581 1.502 - - - - - - 0.793 0.709 - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
41. ppp1r14ba ENSDARG00000044541 792 1.494 - - - - - 0.768 0.726 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
42. nup107 ENSDARG00000016010 1043 1.49 - 0.753 - - - 0.737 - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
43. lrrc58b ENSDARG00000063509 1357 1.483 - - - - - - 0.765 0.718 - leucine rich repeat containing 58b [Source:ZFIN;Acc:ZDB-GENE-050309-29]
44. zgc:158309 zgc:158309 2696 1.433 0.717 - - - - - 0.716 - -
45. b3gnt2l ENSDARG00000068219 1875 1.426 0.716 - - - - - 0.710 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
46. nucb2b ENSDARG00000036291 911 1.421 - - 0.708 - - - 0.713 - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
47. gpr137 ENSDARG00000037244 801 1.417 - - - - - 0.705 0.712 - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
48. si:ch211-59m15.1 87 1 - - - - - 1.000 - - - si:ch211-59m15.1
49. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1 - - - - - 1.000 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
50. spg21 ENSDARG00000007760 409 1 - - - - - 1.000 - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
51. APOA4_2 APOA4_2 61 1 - - - - - 1.000 - - -
52. si:ch73-280o22.2 ENSDARG00000077072 67 0.998 - - - - - 0.998 - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
53. gbp2 ENSDARG00000038669 91 0.998 - - - - - 0.998 - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
54. ZNF648 ENSDARG00000104823 194 0.993 - - - - - 0.993 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
55. BX537137.1 ENSDARG00000092436 77 0.992 - - - - - 0.992 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
56. CU104716.1 ENSDARG00000109332 12 0.99 - - - - - 0.990 - - -
57. BX664721.1 ENSDARG00000051804 21 0.99 - - - - - 0.990 - - -
58. CR848784.2 ENSDARG00000111157 16 0.99 - - - - - 0.990 - - -
59. chtopb ENSDARG00000070430 29 0.99 - - - - - 0.990 - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
60. si:ch73-103l1.2 ENSDARG00000096505 17 0.99 - - - - - 0.990 - - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
61. CT025771.1 ENSDARG00000117721 13 0.99 - - - - - 0.990 - - -
62. si:dkey-263l8.2 si:dkey-263l8.2 3 0.99 - - - - - 0.990 - - -
63. si:ch1073-263o8.2 ENSDARG00000090870 66 0.99 - - - - - 0.990 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
64. myo10l3 ENSDARG00000074143 49 0.99 - - - - - 0.990 - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
65. si:dkey-201l21.4 ENSDARG00000076398 5 0.99 - - - - - 0.990 - - - si:dkey-201l21.4 [Source:ZFIN;Acc:ZDB-GENE-060531-98]
66. si:dkey-117i10.1 ENSDARG00000062537 3 0.99 - - - - - 0.990 - - - si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371]
67. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.99 - - - - - 0.990 - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
68. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.99 - - - - - 0.990 - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
69. si:dkey-153n9.5 si:dkey-153n9.5 20 0.99 - - - - - 0.990 - - -
70. hephl1 hephl1 20 0.99 - - - - - 0.990 - - -
71. si:ch211-264f7.2 si:ch211-264f7.2 2 0.99 - - - - - 0.990 - - -
72. CABZ01057940.1 CABZ01057940.1 4 0.99 - - - - - 0.990 - - -
73. ZBTB41 ENSDARG00000054984 464 0.99 - - - - - 0.990 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
74. CU633486.1 ENSDARG00000098008 3 0.99 - - - - - 0.990 - - -
75. suv39h1a ENSDARG00000026799 18 0.99 - - - - - 0.990 - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
76. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.99 - - - - - 0.990 - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
77. BX004816.2 ENSDARG00000087012 3 0.99 - - - - - 0.990 - - -
78. GRAMD2_1 GRAMD2_1 12 0.99 - - - - - 0.990 - - -
79. BX571811.2 ENSDARG00000105655 11 0.99 - - - - - 0.990 - - -
80. si:rp71-78h1.1 si:rp71-78h1.1 2 0.99 - - - - - 0.990 - - -
81. itk ENSDARG00000017565, ENSDARG00000113497, ENSDARG00000114923 4 0.99 - - - - - 0.990 - - - IL2 inducible T cell kinase [Source:ZFIN;Acc:ZDB-GENE-990415-261]
82. CABZ01073740.1 CABZ01073740.1 27 0.99 - - - - - 0.990 - - -
83. BX322657.1 ENSDARG00000102448 23 0.99 - - - - - 0.990 - - -
84. nobox 5 0.99 - - - - - 0.990 - - - NOBOX oogenesis homeobox
85. slco1f3 ENSDARG00000105691 6 0.99 - - - - - 0.990 - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
86. zgc:171452 ENSDARG00000074069 6 0.99 - - - - - 0.990 - - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
87. si:dkey-234l24.10 si:dkey-234l24.10 2 0.99 - - - - - 0.990 - - -
88. cd4 cd4 4 0.99 - - - - - 0.990 - - -
89. zgc:158580 zgc:158580 2 0.99 - - - - - 0.990 - - -
90. GABRR3 GABRR3 3 0.99 - - - - - 0.990 - - -
91. U6_26 U6_26 2 0.99 - - - - - 0.990 - - -
92. nceh1b nceh1b 22 0.99 - - - - - 0.990 - - -
93. msxa msxa 263 0.99 - - - - - 0.990 - - -
94. MIER3 MIER3 114 0.983 - - - - - 0.983 - - -
95. crygm2d3 ENSDARG00000088823 1560 0.983 - - - - - 0.983 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
96. oaz2b ENSDARG00000059815 38 0.982 - - - - - 0.982 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
97. si:dkey-150k17.3 33 0.982 - - - - - 0.982 - - - si:dkey-150k17.3
98. si:ch73-367f21.6 ENSDARG00000089953 46 0.982 - - - - - 0.982 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
99. si:ch211-219f7.3 si:ch211-219f7.3 48 0.982 - - - - - 0.982 - - -
100. pcdh1b ENSDARG00000036175 101 0.979 - - - - - 0.979 - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]

There are 1165 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA