Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rcn1

Gene Name Gene ID Reads Annotation
rcn1 ENSDARG00000070006 8455 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]










Genes with expression patterns similar to rcn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rcn1 ENSDARG00000070006 8455 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
2. ddx3 ddx3 4076 2.847 - 0.934 0.962 - - - 0.951 - -
3. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.602 - 0.919 - - 0.748 - 0.935 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
4. thbs4a ENSDARG00000102777 625 2.538 - - - - - - 0.908 0.742 0.888 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
5. sh3bgrl3 ENSDARG00000098075 3071 1.897 - - 0.965 - - - 0.932 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
6. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.887 - 0.926 0.961 - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
7. arhgef1b ENSDARG00000055837 2330 1.881 - 0.950 - - 0.931 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
8. brd8 ENSDARG00000025071 2605 1.878 - - 0.964 - 0.914 - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
9. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.868 - 0.902 0.966 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
10. gnl3 ENSDARG00000006219 3854 1.868 - - 0.953 - - - 0.915 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
11. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.866 - 0.938 - - - - 0.928 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
12. ndufv3 ENSDARG00000090389 4829 1.861 - 0.903 0.958 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
13. sepw2a 8597 1.847 - - 0.949 - - - 0.898 - - selenoprotein W, 2a
14. nup98 ENSDARG00000074955 3998 1.845 - - - - 0.936 - 0.909 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
15. farp1 ENSDARG00000074381 406 1.843 - 0.900 - - 0.943 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
16. amot ENSDARG00000078335 1757 1.842 - 0.904 - - 0.938 - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
17. arrb2b ENSDARG00000011545 3126 1.84 - - - - 0.918 - 0.922 - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
18. flncb ENSDARG00000018820 5595 1.838 - 0.894 0.944 - - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
19. bves ENSDARG00000058548 2291 1.835 - 0.911 - - - - 0.924 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
20. cdc42se1 ENSDARG00000023724 3901 1.834 - 0.915 - - 0.919 - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
21. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.828 - 0.932 0.896 - - - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
22. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.828 - 0.908 0.920 - - - - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
23. CNOT2 ENSDARG00000061802 1500 1.828 - 0.911 - - 0.917 - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
24. klf6a ENSDARG00000029072 3758 1.826 - 0.905 - - - - 0.921 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
25. zgc:101846 15202 1.824 - - 0.937 - - - 0.887 - - zgc:101846
26. pdcd10b ENSDARG00000012591 3395 1.819 - 0.907 - - - - 0.912 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
27. hdgfrp2 7462 1.819 - - 0.893 - - - 0.926 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
28. wu:fk48d07 wu:fk48d07 13245 1.817 - 0.913 - - - - 0.904 - -
29. hoxa10b ENSDARG00000031337 3992 1.814 - 0.910 - - - - 0.904 - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
30. tex2 ENSDARG00000078186 2467 1.795 - 0.890 - - - - 0.905 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
31. cdca7a ENSDARG00000077620 9345 1.789 - 0.889 - - - - 0.900 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
32. nop16 ENSDARG00000044402 3645 1.787 - 0.949 - - 0.838 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
33. src ENSDARG00000008107 3643 1.787 - - - - 0.848 - 0.939 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
34. anxa4 ENSDARG00000036456 3332 1.786 - - - - 0.930 - 0.856 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
35. kmt2bb ENSDARG00000060697 5230 1.783 - - - - 0.858 - 0.925 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
36. abcf1 ENSDARG00000031795 8635 1.78 - 0.838 0.942 - - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
37. QPCT ENSDARG00000089717 1383 1.772 - - - - - - 0.905 - 0.867 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
38. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.77 - 0.882 - - - - - - 0.888 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
39. styk1 1199 1.763 - - - - - - 0.924 - 0.839 serine/threonine/tyrosine kinase 1
40. MAP4K4 ENSDARG00000098670 4665 1.743 - 0.905 - - - - 0.838 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
41. aldh18a1 ENSDARG00000099579 2185 1.737 - - - - 0.940 - - 0.797 - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
42. rhoad rhoad 8007 1.734 - 0.922 - - 0.812 - - - -
43. sri ENSDARG00000058593 13152 1.721 - - 0.949 - 0.772 - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
44. mboat2a ENSDARG00000031845 1255 1.717 - - - - 0.920 - - - 0.797 membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
45. arpc4 ENSDARG00000054063 6150 1.711 - - - - 0.914 - 0.797 - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
46. adm2a ENSDARG00000045708, ENSDARG00000111740 246 1.706 - 0.898 - - - - - - 0.808 adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
47. itgb1a ENSDARG00000071863 4007 1.703 - - - - - 0.799 0.904 - - integrin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-060803-2]
48. prpf40a ENSDARG00000058467 6565 1.695 - - 0.876 - 0.819 - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
49. loxl2b ENSDARG00000044074 1919 1.687 - - - - - - 0.917 - 0.770 lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
50. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.685 - - - - 0.899 0.786 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
51. rrp7a ENSDARG00000098934 1123 1.685 - - - - 0.788 - 0.897 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
52. si:ch211-203c7.2 si:ch211-203c7.2 885 1.684 - - - - - - 0.911 - 0.773
53. fndc3ba ENSDARG00000078179 2753 1.683 - 0.901 - - - 0.782 - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
54. kazald2 ENSDARG00000078518 3062 1.683 - - - - - - - 0.822 0.861 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
55. clic4 ENSDARG00000022995 6064 1.676 - - 0.954 - - 0.722 - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
56. myo9al1 myo9al1 1194 1.672 - - - - 0.939 - - 0.733 -
57. ccnb1 ENSDARG00000051923 3226 1.671 - - - - 0.935 - 0.736 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
58. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 1.669 - - - - - - 0.903 - 0.766 meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
59. eif2s3 ENSDARG00000008292 17051 1.669 - - - - 0.773 - 0.896 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
60. marveld2a ENSDARG00000025076 917 1.663 - 0.901 - - - - - - 0.762 MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
61. pah ENSDARG00000020143 1551 1.663 - 0.899 - - - - - 0.764 - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
62. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.662 - - - - 0.940 - - - 0.722 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
63. cbsb ENSDARG00000010946 5779 1.654 - - - - - 0.700 0.954 - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
64. dhx15 ENSDARG00000015392 7496 1.636 - - - - 0.718 - 0.918 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
65. cdv3 ENSDARG00000023028 12380 1.633 - 0.916 - - 0.717 - - - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
66. ripk1l ENSDARG00000006677 593 1.632 - - - - - - 0.903 - 0.729 receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
67. SRGAP3 ENSDARG00000060309 5353 1.629 - 0.901 - - - - 0.728 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
68. ptger1a ENSDARG00000078605 312 1.623 - - - - - - 0.899 - 0.724 prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]
69. ndufb6 ENSDARG00000037259 6515 1.62 - - - - - 0.745 0.875 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
70. kdelr2b ENSDARG00000037361 8410 1.608 - 0.798 - - - - 0.810 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4189]
71. pkp3 pkp3 9767 1.604 - 0.770 - - - - 0.834 - -
72. fubp1 ENSDARG00000029248 15259 1.601 - 0.871 - - 0.730 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
73. si:dkey-125i10.3 ENSDARG00000094760 908 1.588 - - - - - - - 0.722 0.866 si:dkey-125i10.3 [Source:ZFIN;Acc:ZDB-GENE-060526-198]
74. zgc:194839 ENSDARG00000078550 4003 1.582 - 0.727 - - - - 0.855 - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
75. col5a2a ENSDARG00000031678 7743 1.582 - - - 0.727 - - 0.855 - - collagen, type V, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030616-13]
76. pbx2 ENSDARG00000019717 6892 1.579 - - - - 0.844 0.735 - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
77. calua ENSDARG00000045676 16674 1.576 - - - - - 0.783 0.793 - - calumenin a [Source:ZFIN;Acc:ZDB-GENE-040625-166]
78. clint1a ENSDARG00000025535 4965 1.551 - 0.847 - - - - - - 0.704 clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
79. gas1a ENSDARG00000077298 10891 1.549 - - - - 0.802 - 0.747 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
80. igf2bp1 ENSDARG00000061478 22924 1.532 - - - - - 0.757 0.775 - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
81. col8a1a ENSDARG00000077403, ENSDARG00000111174 11125 1.523 - 0.738 - - - - 0.785 - - collagen, type VIII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070912-274]
82. SNRPG ENSDARG00000099667 18697 1.511 - - 0.765 - - 0.746 - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
83. foxp4 ENSDARG00000076120 9458 1.502 - - - - - 0.765 0.737 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
84. ptpn3 ENSDARG00000055784 436 1.487 - - - - - - - 0.768 0.719 protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
85. uqcrh ENSDARG00000059128 30831 1.457 - - - - 0.741 - 0.716 - - ubiquinol-cytochrome c reductase hinge protein [Source:ZFIN;Acc:ZDB-GENE-051030-93]
86. fstl1b ENSDARG00000039576 15992 1.433 - - - - - - 0.715 0.718 - follistatin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3029]
87. CU855890.3 CU855890.3 307 1.415 - - - - - - - 0.706 0.709
88. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.968 - 0.968 - - - - - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
89. FUZ ENSDARG00000079730 821 0.967 - - 0.967 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
90. slc4a2b ENSDARG00000052330 1900 0.967 - - 0.967 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
91. egr2a ENSDARG00000044098 1101 0.967 - - 0.967 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
92. wnt7bb ENSDARG00000071107 1158 0.967 - - 0.967 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
93. METTL18 ENSDARG00000074588 918 0.967 - - 0.967 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
94. rab35 rab35 1287 0.967 - - 0.967 - - - - - -
95. pde12 ENSDARG00000030964 615 0.967 - - 0.967 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
96. taok2b_1 ENSDARG00000100620 2082 0.967 - - 0.967 - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
97. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.967 - - 0.967 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
98. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.967 - - 0.967 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
99. zdhhc6 ENSDARG00000075721 1494 0.967 - - 0.967 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
100. trps1 ENSDARG00000104082 918 0.967 - - 0.967 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]

There are 1216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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