Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rchy1

Gene Name Gene ID Reads Annotation
rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]










Genes with expression patterns similar to rchy1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
2. pus7 ENSDARG00000031774 195 1.756 - - - - - 0.899 - 0.857 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
3. nrp2b ENSDARG00000038446 783 1.743 - - - 0.895 - - - 0.848 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
4. C20H1orf112 C20H1orf112 316 1.699 - - - 0.852 - - - 0.847 -
5. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.656 - - - - - 0.801 - 0.855 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
6. CD53 CD53 108 1.651 - - - 0.867 - 0.784 - - -
7. tmie ENSDARG00000069423 305 1.647 - - - 0.823 - - - 0.824 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
8. nrg2a ENSDARG00000077818 854 1.643 - - - 0.819 - - - 0.824 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
9. rab25a ENSDARG00000058800 451 1.631 - 0.772 - 0.859 - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
10. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.615 - - - 0.866 - 0.749 - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
11. prkag3b ENSDARG00000000369 1945 1.61 - - - 0.762 - - - 0.848 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
12. usp4 ENSDARG00000014770 1684 1.601 - - - - - 0.761 - 0.840 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
13. CR774186.2 CR774186.2 104 1.585 - 0.771 - - - 0.814 - - -
14. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 1.584 - 0.770 - - - - - 0.814 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
15. spef2 ENSDARG00000098330 59 1.579 - - - - - - 0.721 0.858 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
16. CT573103.1 ENSDARG00000097550 950 1.576 - - - - - 0.762 - 0.814 -
17. NHSL2 ENSDARG00000089066 374 1.57 - 0.733 - - - - - 0.837 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
18. fam46a fam46a 92 1.559 - 0.746 - - - 0.813 - - -
19. sp5l ENSDARG00000115868 361 1.551 - 0.819 - - - 0.732 - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
20. ncoa6 ENSDARG00000071272 759 1.55 - - - - - 0.706 - 0.844 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
21. CR627484.1 CR627484.1 452 1.549 - - - 0.828 - - 0.721 - -
22. STMN3 ENSDARG00000038465 1009 1.54 - - - 0.781 - - - 0.759 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
23. trib2 ENSDARG00000068179 616 1.54 0.781 0.759 - - - - - - - tribbles pseudokinase 2 [Source:ZFIN;Acc:ZDB-GENE-091207-3]
24. rhogb ENSDARG00000004301 358 1.536 - - - - - 0.775 - 0.761 - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
25. mrpl20 ENSDARG00000090462 791 1.527 - - - 0.824 - - - 0.703 - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
26. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.523 - 0.772 - - - 0.751 - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
27. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.522 - - - - - - 0.704 0.818 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
28. ctnna2 ENSDARG00000024785 968 1.517 - 0.738 - - - - - 0.779 - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
29. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1.502 - - - 0.714 - 0.788 - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
30. herc2 ENSDARG00000073841 486 1.5 - - - - - 0.744 0.756 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
31. tmem9 ENSDARG00000055757 340 1.493 - - - - - - 0.763 0.730 - transmembrane protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-6083]
32. VGLL3 ENSDARG00000038305 242 1.493 - 0.767 - 0.726 - - - - - vestigial-like family member 3 [Source:ZFIN;Acc:ZDB-GENE-130530-600]
33. GBF1 ENSDARG00000027016 30 1.49 - 0.739 - - - 0.751 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
34. cyt1 ENSDARG00000092947 1717 1.462 - - - - - 0.741 - 0.721 - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
35. METTL18 ENSDARG00000074588 918 1.46 - - - - - 0.750 0.710 - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
36. sema3fb ENSDARG00000055373 834 1.458 - 0.708 - 0.750 - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
37. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 1.45 - 0.721 - - - - 0.729 - - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
38. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 1.446 0.705 - - - - - - 0.741 - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
39. vwa9 1013 1.421 - - - 0.701 - 0.720 - - - von Willebrand factor A domain containing 9, transcript variant X1
40. NTAN1 ENSDARG00000105182 844 0.933 - - - - - - - 0.933 - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
41. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 0.931 - - - - - - - 0.931 - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
42. tubgcp5 ENSDARG00000077442 507 0.924 - - - - - - - 0.924 - tubulin, gamma complex associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-050522-344]
43. mpp5a ENSDARG00000006272 1181 0.921 - - - 0.921 - - - - - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
44. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 0.921 - - - - - - - 0.921 - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
45. tasp1 ENSDARG00000060580 453 0.918 - - - - - 0.918 - - - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
46. fam57ba ENSDARG00000026875 504 0.917 - - - 0.917 - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
47. pgls ENSDARG00000021233 264 0.914 - - - 0.914 - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
48. eapp ENSDARG00000017272 404 0.914 - - - - - - - 0.914 - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
49. nsun5 ENSDARG00000043209 764 0.911 - - - 0.911 - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
50. mbip ENSDARG00000019364 238 0.911 - - - 0.911 - - - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
51. SERTAD4 ENSDARG00000089795 791 0.907 - - - 0.907 - - - - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
52. mecp2 ENSDARG00000014218 269 0.904 - - - 0.904 - - - - - methyl CpG binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7190]
53. NBR1 NBR1 752 0.901 - - - 0.901 - - - - -
54. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.9 - - - - - - - 0.900 - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
55. plekhm2 ENSDARG00000078850 207 0.9 - - - - - - - 0.900 - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
56. ZBTB7B ENSDARG00000021891 843 0.898 - - - - - - - 0.898 - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
57. rbm38 ENSDARG00000058818 647 0.898 - - - - - - - 0.898 - RNA binding motif protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-5923]
58. mfn2 ENSDARG00000079504 726 0.897 - - - 0.897 - - - - - mitofusin 2 [Source:ZFIN;Acc:ZDB-GENE-081105-44]
59. SLC41A2 SLC41A2 202 0.893 - - - - - - - 0.893 -
60. atr ENSDARG00000079625 231 0.89 - - - 0.890 - - - - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
61. yeats4 ENSDARG00000045874 1168 0.889 - - - 0.889 - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
62. rad50 ENSDARG00000038917 1105 0.886 - 0.886 - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
63. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.884 - 0.884 - - - - - - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
64. CABZ01081897.1 ENSDARG00000110500 253 0.882 - - - 0.882 - - - - -
65. spra ENSDARG00000004406 268 0.878 - - - - - 0.878 - - - sepiapterin reductase a [Source:ZFIN;Acc:ZDB-GENE-050522-412]
66. palmdb ENSDARG00000034321 75 0.878 - 0.878 - - - - - - - palmdelphin b [Source:ZFIN;Acc:ZDB-GENE-090713-3]
67. PRR5 PRR5 630 0.878 - - - - - - - 0.878 -
68. dars2 ENSDARG00000060861 137 0.878 - - - 0.878 - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
69. lrrc47 ENSDARG00000053138 417 0.877 - - - 0.877 - - - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
70. BX005410.2 BX005410.2 44 0.876 - - - - - - - 0.876 -
71. ccm2l ENSDARG00000063089 100 0.875 - - - 0.875 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
72. mapk13 ENSDARG00000058470 1001 0.875 - - - 0.875 - - - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
73. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.874 - - - - - - - 0.874 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
74. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.873 - - - 0.873 - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
75. CABZ01054965.1 ENSDARG00000090844 74 0.872 - - - 0.872 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
76. zgc:77391 zgc:77391 1445 0.87 - - - 0.870 - - - - -
77. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.87 - - - 0.870 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
78. ALMS1 ENSDARG00000074779 900 0.87 - - - 0.870 - - - - - Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]
79. memo1 ENSDARG00000010823 1681 0.868 - - - 0.868 - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
80. C9H3orf70 C9H3orf70 225 0.867 - - - 0.867 - - - - -
81. CRTC1 47 0.867 - - - 0.867 - - - - - CREB regulated transcription coactivator 1
82. park2 42 0.866 - - - - - 0.866 - - - parkin RBR E3 ubiquitin protein ligase
83. p2rx3b ENSDARG00000029718 105 0.866 - - - - - - - 0.866 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
84. atl3 ENSDARG00000004270 2806 0.865 - - - 0.865 - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
85. ptprz1b ENSDARG00000020871 435 0.865 - - - 0.865 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
86. CU928220.1 CU928220.1 146 0.865 - - - 0.865 - - - - -
87. ror1 ENSDARG00000015176 378 0.864 - - - - - 0.864 - - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
88. adam10b ENSDARG00000015502 26 0.864 - - - 0.864 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
89. ENSDARG00000092971 ENSDARG00000092971 563 0.864 - - - 0.864 - - - - -
90. map3k8 ENSDARG00000061710 76 0.864 - - - 0.864 - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
91. gpr186 ENSDARG00000094860 53 0.864 - - - 0.864 - - - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
92. si:dkey-16b10.3 si:dkey-16b10.3 21 0.864 - - - 0.864 - - - - -
93. zgc:92161 ENSDARG00000101749 27 0.863 - - - 0.863 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
94. TTF1_1 TTF1_1 299 0.863 - - - 0.863 - - - - -
95. rnf14 ENSDARG00000043905 862 0.863 - - - - - - - 0.863 - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
96. slc25a5 ENSDARG00000092553 626 0.863 - - - 0.863 - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
97. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.863 - - - 0.863 - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
98. trappc5 ENSDARG00000026068 1350 0.862 - - - - - - - 0.862 - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
99. spop ENSDARG00000100519 177 0.862 - - - 0.862 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
100. ercc5 ENSDARG00000023678 468 0.862 - - - 0.862 - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]

There are 1160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA