Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rccd1_1

Gene Name Gene ID Reads Annotation
rccd1_1 ENSDARG00000071074 24 RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]










Genes with expression patterns similar to rccd1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rccd1_1 ENSDARG00000071074 24 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000 RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
2. kcng1 ENSDARG00000099038 23 1.912 1.000 - - - - - 0.912 - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
3. CU570691.1 ENSDARG00000088908 5 1.876 1.000 - - - - - 0.876 - -
4. TRAPPC9 ENSDARG00000099118 26 1.767 1.000 - - - - - 0.767 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
5. cnih3 ENSDARG00000014953 25 1.698 0.939 - - - - - 0.759 - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
6. CST7 CST7 22 1.675 - - - - - - 0.759 - 0.916
7. si:ch211-147m20.1 si:ch211-147m20.1 6 1.6 0.818 - - 0.782 - - - - -
8. gpc2 ENSDARG00000104217 10 1.561 - - 0.802 - - - 0.759 - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
9. si:dkey-78a14.4 ENSDARG00000036066 17 1.551 - - - 0.799 - - 0.752 - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
10. esyt1b ENSDARG00000014239 8 1.527 - - - - 0.709 - 0.818 - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
11. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
12. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
13. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - - 1.000 - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
14. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
15. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
16. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1 1.000 - - - - - - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
17. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
18. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
19. chrm4a ENSDARG00000069254 32 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
20. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
21. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
22. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
23. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
24. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - - - 1.000 - -
25. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
26. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
27. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
28. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
29. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
30. cyp2aa7 ENSDARG00000103766 8 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily AA, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-071004-48]
31. si:dkey-265k11.2 si:dkey-265k11.2 44 1 1.000 - - - - - - - -
32. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
33. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
34. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
35. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
36. CT868708.1 ENSDARG00000097601 2 1 - - - - - - 1.000 - -
37. BX005305.4 ENSDARG00000114385 6 1 - - - - - - 1.000 - - legumain [Source:NCBI gene;Acc:569153]
38. si:ch211-10j20.7 si:ch211-10j20.7 8 1 1.000 - - - - - - - -
39. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 1.000 - - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
40. FAXC FAXC 102 1 1.000 - - - - - - - -
41. esr2a ENSDARG00000016454 23 1 - - - - - - 1.000 - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
42. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
43. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
44. RNase_MRP RNase_MRP 118 1 - - - - - - 1.000 - -
45. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
46. CUZD1_1 CUZD1_1 3 1 - - - - - - 1.000 - -
47. rnf217 ENSDARG00000060944 10 1 1.000 - - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
48. sst6 ENSDARG00000093804, ENSDARG00000116656 31 1 - - - - - - 1.000 - - somatostatin 6 [Source:ZFIN;Acc:ZDB-GENE-081022-199]
49. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
50. ENSDARG00000091382 ENSDARG00000091382 4 1 - - - - - - 1.000 - -
51. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
52. pcdh2g1 1 1 - - - - - - - - 1.000 protocadherin 2 gamma 1
53. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
54. AGO3 AGO3 12 1 - - - - - - 1.000 - -
55. CABZ01021454.2 CABZ01021454.2 3 1 1.000 - - - - - - - -
56. ENSDARG00000096199 ENSDARG00000096199 15 1 1.000 - - - - - - - -
57. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
58. ENSDARG00000090843 ENSDARG00000090843 2 1 - - - - - - - - 1.000
59. odf3l2 36 1 1.000 - - - - - - - - outer dense fiber of sperm tails 3-like 2
60. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
61. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
62. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
63. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
64. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
65. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
66. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
67. cabp2a ENSDARG00000052016 19 1 - - - - - - 1.000 - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
68. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
69. BICD1 BICD1 9 1 1.000 - - - - - - - -
70. crygm2d6 ENSDARG00000073874 38 1 - - - - - - 1.000 - - crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
71. CABZ01081747.1 ENSDARG00000098362 1 1 - - - - - - - - 1.000 gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:100330321]
72. ELMSAN1 ELMSAN1 3 1 - - - - - - 1.000 - -
73. BX005423.3 BX005423.3 33 1 - - - - - - 1.000 - -
74. TRIM14_2 TRIM14_2 15 1 - - - - - - 1.000 - -
75. cx45.6 cx45.6 26 1 - - - - - - 1.000 - -
76. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - - - - - - 1.000 - -
77. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
78. si:dkey-199m13.8 si:dkey-199m13.8 61 1 1.000 - - - - - - - -
79. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
80. zdhhc12b ENSDARG00000052787 43 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
81. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
82. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
83. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
84. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
85. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
86. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
87. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
88. CABZ01084273.1 CABZ01084273.1 16 1 1.000 - - - - - - - -
89. slc43a3a ENSDARG00000059682 27 1 - - - - - - 1.000 - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
90. MPST MPST 6 1 - - - - - - 1.000 - -
91. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
92. rhd ENSDARG00000002194 269 1 - - - - - - 1.000 - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
93. CLDN18 ENSDARG00000103087 2 1 - - - - - - 1.000 - - claudin 18 [Source:ZFIN;Acc:ZDB-GENE-130530-867]
94. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
95. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
96. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
97. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
98. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
99. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
100. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 1.000 - - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]

There are 622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA