Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rcc2

Gene Name Gene ID Reads Annotation
rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]










Genes with expression patterns similar to rcc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
2. hnrnpm ENSDARG00000061735 19428 3.416 - 0.756 0.894 0.790 - - 0.976 - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
3. kctd5 kctd5 13455 2.842 - - 0.912 - - 0.981 - - 0.949
4. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 2.694 - 0.749 - - - - 0.964 - 0.981 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
5. fubp1 ENSDARG00000029248 15259 2.625 - - - 0.753 0.875 - 0.997 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
6. sdc4 ENSDARG00000059906 10105 2.607 - 0.789 - - 0.856 0.962 - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
7. nup98 ENSDARG00000074955 3998 2.571 - 0.777 - - 0.811 - - - 0.983 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
8. nova2 ENSDARG00000017673 7685 2.498 - - - 0.801 0.856 - - 0.841 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
9. srsf6b ENSDARG00000016783 9926 2.445 - - 0.945 0.749 - - - 0.751 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
10. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.303 0.748 0.703 - 0.852 - - - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
11. chd4b ENSDARG00000025789 14299 2.298 - 0.739 - - - 0.787 - 0.772 - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
12. hnrnpub ENSDARG00000004735 16496 2.18 0.710 - - 0.710 - - - 0.760 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
13. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.922 - - 0.933 - - - 0.989 - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
14. stip1 ENSDARG00000004906 7742 1.908 - - 0.929 - - - - - 0.979 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
15. rpl4 ENSDARG00000041182 18655 1.903 - - 0.952 - - - - - 0.951 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
16. zgc:101846 15202 1.89 - - 0.912 - - 0.978 - - - zgc:101846
17. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.883 - - - - 0.890 0.993 - - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
18. zgc:110339 ENSDARG00000046030 8180 1.863 - - 0.868 - - - 0.995 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
19. fundc2 ENSDARG00000103740 3856 1.846 - 0.850 - - - - 0.996 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
20. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.833 - - 0.932 - - 0.901 - - - moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
21. hsdl2 ENSDARG00000002523 2746 1.81 - 0.817 - - - 0.993 - - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
22. mapre1b ENSDARG00000002659 9119 1.801 - - - - 0.802 - 0.999 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
23. h3f3d ENSDARG00000045248 43757 1.8 - - - 0.815 - - 0.985 - - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
24. midn ENSDARG00000018524 7559 1.791 - 0.833 - - - - - - 0.958 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
25. kpnb3 ENSDARG00000040245 7967 1.785 - - 0.935 0.850 - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
26. cenpf ENSDARG00000055133 5267 1.783 - 0.790 - - - 0.993 - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
27. tle2 5014 1.777 - - 0.948 0.829 - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
28. fbl ENSDARG00000053912 5891 1.768 - - - - 0.769 - 0.999 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
29. vamp2 ENSDARG00000056877 2158 1.761 0.762 - - - - - 0.999 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
30. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.761 - 0.762 - - - - 0.999 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
31. kdm1a ENSDARG00000060679 6152 1.756 - - - 0.760 - - - - 0.996 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
32. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.748 - 0.813 0.935 - - - - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
33. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.744 - - - - - 0.997 - 0.747 - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
34. cd276 ENSDARG00000003061 2798 1.743 - 0.744 - - - - 0.999 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
35. brd8 ENSDARG00000025071 2605 1.737 - - 0.938 - 0.799 - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
36. mapk6 ENSDARG00000032103 6422 1.732 - - - - 0.733 - 0.999 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
37. med6 ENSDARG00000034734 2711 1.716 - 0.717 - - - - 0.999 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
38. meis1 meis1 6937 1.715 - 0.717 - - - - 0.998 - -
39. ube2i ube2i 13024 1.712 - - - 0.720 - 0.992 - - -
40. C24H7orf50 1417 1.711 - 0.735 - - - - - - 0.976 chromosome 24 C7orf50 homolog, transcript variant X2
41. ap2m1a ENSDARG00000002790 9781 1.708 - 0.723 - - - 0.985 - - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
42. apex1 ENSDARG00000045843 6345 1.708 - - - 0.713 - - - - 0.995 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
43. adssl ENSDARG00000012399 2271 1.707 - - - 0.708 - - 0.999 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
44. vta1 ENSDARG00000013732 6072 1.707 - 0.729 - - - - - - 0.978 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
45. cops5 ENSDARG00000057624 1485 1.702 - 0.769 0.933 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
46. zfp36l1b ENSDARG00000021443 2974 1.702 - 0.708 - - - 0.994 - - - zinc finger protein 36, C3H type-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2391]
47. hnrnpua ENSDARG00000015206 4012 1.698 - 0.702 - - - 0.996 - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
48. DACT3_1 DACT3_1 1235 1.689 - - 0.939 0.750 - - - - -
49. si:dkey-13i19.8 ENSDARG00000093058 4617 1.682 - 0.703 - - - - 0.979 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
50. PYURF ENSDARG00000045773 4576 1.681 - 0.752 0.929 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
51. prpf40a ENSDARG00000058467 6565 1.677 - - 0.860 - 0.817 - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
52. kmt2cb ENSDARG00000075560 4816 1.673 - 0.738 0.935 - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
53. ezh2 ENSDARG00000010571 3273 1.671 - - - 0.851 0.820 - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
54. abcf1 ENSDARG00000031795 8635 1.662 - - 0.930 0.732 - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
55. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.658 - - 0.906 0.752 - - - - - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
56. cdk2 ENSDARG00000026577 2835 1.653 - - 0.941 0.712 - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
57. eif4ebp2 ENSDARG00000031819 13168 1.653 - - 0.926 - - - - 0.727 - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
58. sepw2a 8597 1.641 - - 0.931 - - - - 0.710 - selenoprotein W, 2a
59. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.638 - - - 0.756 0.882 - - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
60. hgs ENSDARG00000020960 3574 1.625 - 0.881 - - 0.744 - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
61. TUBA1A ENSDARG00000001889 25294 1.608 - - 0.783 0.825 - - - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
62. tfdp2 ENSDARG00000042835 1985 1.607 0.819 - - 0.788 - - - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
63. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.601 0.761 - - - 0.840 - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
64. znf865 ENSDARG00000036698 15532 1.599 - 0.792 - 0.807 - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
65. hmgb1b ENSDARG00000030479 10398 1.599 0.714 - - - 0.885 - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
66. HNRNPA2B1 HNRNPA2B1 14997 1.596 - - - 0.815 - - - 0.781 -
67. ppp1cb ENSDARG00000044153 4748 1.565 - 0.814 - - 0.751 - - - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
68. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.564 - - - 0.744 0.820 - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
69. zfand5b ENSDARG00000002271 4145 1.561 - 0.801 - - 0.760 - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
70. syncrip ENSDARG00000040184 24690 1.559 - - 0.723 - - - - 0.836 - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
71. lmnb2 ENSDARG00000101624 11304 1.559 - - - 0.707 0.852 - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
72. pcdh19 ENSDARG00000034344 2378 1.559 - 0.723 - 0.836 - - - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
73. dpysl3 ENSDARG00000002587 4381 1.552 - - - - 0.755 - - 0.797 - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
74. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.549 - - - 0.747 0.802 - - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
75. ilf2 ENSDARG00000014591 14543 1.544 - - - 0.799 - 0.745 - - - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
76. lfng ENSDARG00000037879 11783 1.541 - - - 0.771 - - - 0.770 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
77. mcm5 ENSDARG00000019507 6407 1.537 - 0.729 - 0.808 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
78. sox2 ENSDARG00000070913 2763 1.532 0.715 - - 0.817 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
79. si:ch211-51e12.7 ENSDARG00000045914 9598 1.526 - - - 0.713 - - - 0.813 - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
80. cdkn2aipnl ENSDARG00000053395 5107 1.525 - - - 0.714 0.811 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
81. slc38a4 ENSDARG00000018149 2344 1.523 0.774 - - - 0.749 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
82. coil ENSDARG00000040070 863 1.52 - - - 0.718 0.802 - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
83. smg7 ENSDARG00000060767 2759 1.52 - - - 0.742 0.778 - - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
84. CLSPN 2054 1.517 - 0.726 - 0.791 - - - - - claspin
85. ctnnd2b ENSDARG00000003779 964 1.514 - - - 0.740 0.774 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
86. ncaph2 ENSDARG00000033757 1042 1.507 - - - 0.733 0.774 - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
87. ccng1 ENSDARG00000076667, ENSDARG00000110260 40792 1.504 - - 0.779 - - 0.725 - - - cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
88. FP016176.1 FP016176.1 7030 1.502 - 0.761 - - - - - 0.741 -
89. sp4 ENSDARG00000005186 2904 1.495 - 0.750 - - 0.745 - - - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
90. fzd1 ENSDARG00000106062 1581 1.488 - - - 0.719 0.769 - - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
91. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.479 - 0.764 - - 0.715 - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
92. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.477 0.723 0.754 - - - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
93. mbd1 mbd1 1309 1.475 - - - 0.723 0.752 - - - -
94. dhx9 ENSDARG00000079725 1241 1.473 - 0.712 - - 0.761 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
95. ccne2 ENSDARG00000098529 4695 1.464 - - - 0.749 - - - - 0.715 cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
96. ints1 ENSDARG00000100419 1958 1.463 - 0.703 - - 0.760 - - - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
97. ube2e1 ENSDARG00000116649 10656 1.461 - 0.733 - - - - - 0.728 - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
98. npm1b ENSDARG00000037675 5448 1.451 - - - 0.730 0.721 - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
99. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.446 0.710 0.736 - - - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
100. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.435 - - 0.716 - - - - - 0.719 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]

There are 1114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA