Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rcc1

Gene Name Gene ID Reads Annotation
rcc1 ENSDARG00000037158 1165 regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]










Genes with expression patterns similar to rcc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rcc1 ENSDARG00000037158 1165 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
2. nin ENSDARG00000060298 1558 1.786 - - - 0.997 - 0.789 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
3. C13H9orf72 C13H9orf72 2310 1.757 - 0.759 - 0.998 - - - - -
4. exosc8 ENSDARG00000068755 951 1.72 - - - 0.998 - - 0.722 - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
5. ARFGAP1 ENSDARG00000101616 2952 1.714 - - - 0.996 - 0.718 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
6. atat1 ENSDARG00000004472 700 1.699 - - - 0.998 - 0.701 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
7. mllt10 ENSDARG00000045401 7557 1.698 - - - 0.987 - 0.711 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
8. LYAR ENSDARG00000098507 1506 1.678 - 0.835 - 0.843 - - - - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
9. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.604 - 0.823 - - - 0.781 - - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
10. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.573 - 0.753 - - - 0.820 - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
11. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1.567 - - - - - 0.794 0.773 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
12. MLLT1 MLLT1 349 1.565 - - - - - 0.709 0.856 - -
13. dacha ENSDARG00000010132 648 1.547 - 0.732 - - - 0.815 - - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
14. wu:fd44f01 wu:fd44f01 391 1.526 - - - - - 0.743 0.783 - -
15. WDFY3 ENSDARG00000078890 2092 1.516 - 0.739 - - - 0.777 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
16. tcf7l1b ENSDARG00000007369 2785 1.498 - - - 0.791 - 0.707 - - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
17. rgs3a ENSDARG00000099746 727 1.494 - - - - - 0.704 0.790 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
18. fbrs ENSDARG00000074688 621 1.474 - - - - - 0.766 0.708 - - fibrosin [Source:ZFIN;Acc:ZDB-GENE-111207-1]
19. rnd1 rnd1 1086 1.47 - - - - - 0.719 0.751 - -
20. med13b ENSDARG00000003910 1143 1.459 - 0.708 - - - 0.751 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
21. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.453 0.730 - - - - 0.723 - - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
22. SLC36A4 ENSDARG00000039661 175 1.449 - - - - - 0.724 0.725 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
23. CU463790.1 CU463790.1 60 1.444 - 0.726 - - - 0.718 - - -
24. ctdspl2b ENSDARG00000060586 1682 1.443 - 0.735 - - - - 0.708 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
25. hint3 ENSDARG00000074286 1015 1.437 - 0.716 - - - 0.721 - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
26. rangap1a ENSDARG00000041317 1456 1.433 - - - - - 0.701 0.732 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
27. mbtps2 ENSDARG00000057577 1285 0.999 - - - 0.999 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
28. ZNF628 1104 0.999 - - - 0.999 - - - - - zinc finger protein 628, transcript variant X3
29. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 0.998 - - - 0.998 - - - - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
30. syf2 ENSDARG00000004706 2463 0.998 - - - 0.998 - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
31. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.998 - - - 0.998 - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
32. angptl4 ENSDARG00000035859 2701 0.998 - - - 0.998 - - - - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
33. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 0.998 - - - 0.998 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
34. RAPGEF2 ENSDARG00000005482 2068 0.998 - - - 0.998 - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
35. cbx3b ENSDARG00000092158 1976 0.998 - - - 0.998 - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
36. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.998 - - - 0.998 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
37. ppp2r5a ENSDARG00000027017 2397 0.998 - - - 0.998 - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
38. mob3a ENSDARG00000019113 2551 0.998 - - - 0.998 - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
39. ccdc22 ENSDARG00000052379 2276 0.998 - - - 0.998 - - - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
40. creb1a ENSDARG00000053586 5068 0.997 - - - 0.997 - - - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
41. piezo1 ENSDARG00000076870 4704 0.997 - - - 0.997 - - - - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
42. llgl2 ENSDARG00000023920 2617 0.997 - - - 0.997 - - - - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
43. wu:fj13e08 1223 0.997 - - - 0.997 - - - - - wu:fj13e08
44. usp4 ENSDARG00000014770 1684 0.997 - - - 0.997 - - - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
45. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 0.997 - - - 0.997 - - - - - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
46. greb1 ENSDARG00000070794 1741 0.997 - - - 0.997 - - - - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
47. ip6k2 ip6k2 3926 0.997 - - - 0.997 - - - - -
48. elmod2 ENSDARG00000101669 3101 0.996 - - - 0.996 - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
49. rars ENSDARG00000054530 1495 0.996 - - - 0.996 - - - - - arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
50. ncoa4 ENSDARG00000021439 4581 0.996 - - - 0.996 - - - - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
51. hexb ENSDARG00000034368 3505 0.996 - - - 0.996 - - - - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
52. lig3 ENSDARG00000052553 2665 0.996 - - - 0.996 - - - - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
53. kdsr ENSDARG00000012021 1560 0.996 - - - 0.996 - - - - - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
54. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.996 - - - 0.996 - - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
55. thoc7 ENSDARG00000015394 3824 0.995 - - - 0.995 - - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
56. lsm14ab ENSDARG00000100553 3837 0.995 - - - 0.995 - - - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
57. zgc:77262 ENSDARG00000044545 5563 0.995 - - - 0.995 - - - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
58. eppk1 ENSDARG00000096359 4315 0.995 - - - 0.995 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
59. pinx1 ENSDARG00000023532 4452 0.995 - - - 0.995 - - - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
60. napa napa 4444 0.995 - - - 0.995 - - - - -
61. meis3 ENSDARG00000002795 2509 0.995 - - - 0.995 - - - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
62. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 0.995 - - - 0.995 - - - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
63. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.994 - - - 0.994 - - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
64. atp1b3a ENSDARG00000015790 12310 0.994 - - - 0.994 - - - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
65. nt5c2b ENSDARG00000058231 3822 0.994 - - - 0.994 - - - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
66. paip2b ENSDARG00000008706 4255 0.993 - - - 0.993 - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
67. si:ch73-110p20.1 5932 0.992 - - - 0.992 - - - - - si:ch73-110p20.1
68. taf10 ENSDARG00000068641 3333 0.992 - - - 0.992 - - - - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
69. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 0.992 - - - 0.992 - - - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
70. nucks1b ENSDARG00000012777 4468 0.992 - - - 0.992 - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
71. vimp 4034 0.992 - - - 0.992 - - - - - VCP-interacting membrane selenoprotein
72. ndufa10 ENSDARG00000013333 6597 0.991 - - - 0.991 - - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
73. SH3BGRL ENSDARG00000058302 4525 0.991 - - - 0.991 - - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
74. srm ENSDARG00000055760 6572 0.991 - - - 0.991 - - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
75. emc6 ENSDARG00000035282 4981 0.991 - - - 0.991 - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
76. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 0.99 - - - 0.990 - - - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
77. cers2b ENSDARG00000058992 5319 0.99 - - - 0.990 - - - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
78. capn2b ENSDARG00000055592 5431 0.989 - - - 0.989 - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
79. COL22A1 COL22A1 4473 0.989 - - - 0.989 - - - - -
80. arhgdig ENSDARG00000004034 10368 0.988 - - - 0.988 - - - - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
81. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.988 - - - 0.988 - - - - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
82. trappc1 ENSDARG00000039005 6990 0.986 - - - 0.986 - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
83. pdcd4a ENSDARG00000021702 7293 0.986 - - - 0.986 - - - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
84. sncb ENSDARG00000104945 8197 0.985 - - - 0.985 - - - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
85. zgc:109868 zgc:109868 7474 0.984 - - - 0.984 - - - - -
86. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 0.984 - - - 0.984 - - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
87. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.984 - - - 0.984 - - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
88. eif3ha ENSDARG00000102452 9238 0.983 - - - 0.983 - - - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
89. gdi1 ENSDARG00000056122 4106 0.982 - - - 0.982 - - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
90. hadhb ENSDARG00000102055 9700 0.982 - - - 0.982 - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
91. wu:fb17g07 wu:fb17g07 10567 0.98 - - - 0.980 - - - - -
92. supt16h ENSDARG00000079949 4755 0.979 - - - 0.979 - - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
93. gpx4b ENSDARG00000076836 8085 0.972 - - - 0.972 - - - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
94. hnrpdl 14288 0.967 - - - 0.967 - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
95. mapre1b ENSDARG00000002659 9119 0.967 - - - 0.967 - - - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
96. lmnb1 ENSDARG00000044299 9817 0.963 - - - 0.963 - - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
97. hif1al ENSDARG00000100826 18627 0.962 - - - 0.962 - - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
98. dla ENSDARG00000010791 9281 0.96 - - - 0.960 - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
99. elavl1 11672 0.955 - - - 0.955 - - - - - ELAV like RNA binding protein 1, transcript variant X3
100. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.953 - - - - - - 0.953 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]

There are 1126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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