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Results for rbx1

Gene Name Gene ID Reads Annotation
rbx1 ENSDARG00000038030 14611 ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]










Genes with expression patterns similar to rbx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbx1 ENSDARG00000038030 14611 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
2. ldha ENSDARG00000101251 10868 2.56 0.747 0.837 - - - - 0.976 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
3. eif3c ENSDARG00000016443 18003 1.912 - - - - - - 0.993 - 0.919 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
4. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 1.86 - 0.866 - - - - 0.994 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
5. wnk1b ENSDARG00000039392 3587 1.849 0.857 - - - - - 0.992 - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
6. tubb4b ENSDARG00000002344 30333 1.839 - - - - - - 0.979 - 0.860 tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
7. FP102272.1 FP102272.1 9473 1.8 0.807 - - - - - 0.993 - -
8. ndrg2 ENSDARG00000011170 11442 1.766 - 0.827 - - - - - - 0.939 NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
9. sltm ENSDARG00000052728 6234 1.763 0.801 - - - - - - - 0.962 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
10. zc3h15 ENSDARG00000015889 3861 1.761 0.799 - - - - - - - 0.962 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
11. qkia ENSDARG00000097478 18572 1.741 - - - - - 0.752 0.989 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
12. nnt ENSDARG00000023536 7357 1.723 - - - - - 0.765 - - 0.958 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
13. srsf5a ENSDARG00000029818 15600 1.714 - - - - - 0.717 0.997 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
14. ube2f ENSDARG00000025754 1946 1.704 0.868 0.836 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
15. tmpoa ENSDARG00000007315 3638 1.672 - 0.827 - - - 0.845 - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
16. ubqln4 ENSDARG00000052975 6453 1.668 - 0.930 - - - 0.738 - - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
17. atp2b4 5891 1.665 - 0.873 - - - 0.792 - - - ATPase, Ca++ transporting, plasma membrane 4
18. rpl35 ENSDARG00000018334 69583 1.664 - - 0.728 - - - - - 0.936 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
19. gmfb ENSDARG00000028327 6522 1.663 0.818 - - - - - - - 0.845 glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
20. zgc:193541 ENSDARG00000092873 21276 1.663 - 0.941 - - - 0.722 - - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
21. smarca4 smarca4 9726 1.657 - 0.915 - - - 0.742 - - -
22. setb ENSDARG00000003920 21788 1.65 - - - - - 0.716 - - 0.934 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
23. clpxb ENSDARG00000067796 1918 1.63 0.809 0.821 - - - - - - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
24. C6H6orf106 C6H6orf106 2940 1.625 0.878 - - - - 0.747 - - -
25. alyref ENSDARG00000077732 25934 1.602 - - - - - 0.734 - - 0.868 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
26. ahsa1l ahsa1l 2366 1.599 0.761 0.838 - - - - - - -
27. snrnp70 ENSDARG00000077126 5921 1.597 0.852 - - - - 0.745 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
28. vapal ENSDARG00000115862 3108 1.594 0.866 - - - - 0.728 - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
29. G3BP2 ENSDARG00000014790 9380 1.593 - - - - - 0.738 - - 0.855 GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
30. cyc1 ENSDARG00000038075 16699 1.585 - 0.868 - - - 0.717 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
31. acap3a ENSDARG00000075990 9652 1.584 - 0.832 - - - 0.752 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
32. MRPL52 ENSDARG00000090568 4402 1.579 0.877 - - - - - - - 0.702 mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
33. ppiab ENSDARG00000103994 47491 1.576 - - - 0.707 - - - - 0.869 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
34. zgc:111974 zgc:111974 1386 1.573 0.735 0.838 - - - - - - -
35. chchd1 ENSDARG00000029100 2121 1.556 0.814 - - - - 0.742 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
36. cnot3a ENSDARG00000007135 3084 1.54 0.801 - - - - 0.739 - - - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
37. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.539 - 0.826 - - - 0.713 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
38. zgc:86598 ENSDARG00000014222 3664 1.535 - 0.829 - - - 0.706 - - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
39. akirin2 ENSDARG00000058729 13245 1.516 0.813 - - - - 0.703 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
40. scaf1 ENSDARG00000054010 3752 1.495 0.739 - - - - 0.756 - - - SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
41. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.472 - - - - - 0.762 - - 0.710 small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
42. CABZ01092303.1 CABZ01092303.1 8825 1.466 0.743 - - - - 0.723 - - -
43. oaz1b ENSDARG00000104782 37623 1.458 - - - 0.734 - - - - 0.724 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
44. eif3g ENSDARG00000016889 10367 1.454 - - - - 0.707 0.747 - - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
45. mapre1b ENSDARG00000002659 9119 1.435 - - - - - 0.723 - 0.712 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
46. hmgcl ENSDARG00000021220 2468 0.998 - - - - - - 0.998 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
47. nr2f1a ENSDARG00000052695 5037 0.998 - - - - - - 0.998 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
48. tomm20b ENSDARG00000103566 12436 0.996 - - - - - - 0.996 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
49. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.994 - - - - - - 0.994 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
50. wu:fj08f03 wu:fj08f03 1337 0.994 - - - - - - 0.994 - -
51. parp1 ENSDARG00000019529 6787 0.994 - - - - - - 0.994 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
52. stx12 ENSDARG00000098813 2576 0.994 - - - - - - 0.994 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
53. CT955967.1 ENSDARG00000099956 2885 0.994 - - - - - - 0.994 - -
54. rgma ENSDARG00000012248 2238 0.994 - - - - - - 0.994 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
55. cmip ENSDARG00000062933 4521 0.994 - - - - - - 0.994 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
56. rbm39a ENSDARG00000011613 4520 0.994 - - - - - - 0.994 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
57. aspg ENSDARG00000052942 1406 0.994 - - - - - - 0.994 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
58. cth ENSDARG00000074301 3860 0.994 - - - - - - 0.994 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
59. sh3gl3a ENSDARG00000013360 3602 0.994 - - - - - - 0.994 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
60. serpine2 ENSDARG00000029353 2274 0.994 - - - - - - 0.994 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
61. AL772300.3 AL772300.3 1752 0.994 - - - - - - 0.994 - -
62. efcab7 ENSDARG00000020279 1030 0.994 - - - - - - 0.994 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
63. ndufa7 ENSDARG00000036684 6051 0.994 - - - - - - 0.994 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
64. PCDH9 ENSDARG00000063264 1309 0.994 - - - - - - 0.994 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
65. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.994 - - - - - - 0.994 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
66. loxl2a ENSDARG00000044010 1906 0.994 - - - - - - 0.994 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
67. vamp3 ENSDARG00000070161 6396 0.994 - - - - - - 0.994 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
68. chd2 ENSDARG00000060687 3832 0.994 - - - - - - 0.994 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
69. phf2 ENSDARG00000018691 3341 0.994 - - - - - - 0.994 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
70. TUBGCP6 1991 0.994 - - - - - - 0.994 - - tubulin, gamma complex associated protein 6
71. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.994 - - - - - - 0.994 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
72. EIF4G1_1 EIF4G1_1 3721 0.994 - - - - - - 0.994 - -
73. cep97 ENSDARG00000102407 1154 0.994 - - - - - - 0.994 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
74. hoxb8a ENSDARG00000056027 6340 0.994 - - - - - - 0.994 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
75. rab5aa ENSDARG00000018602 8947 0.993 - - - - - - 0.993 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
76. BX548078.1 ENSDARG00000093780 1325 0.993 - - - - - - 0.993 - -
77. zgc:101000 zgc:101000 9041 0.993 - - - - - - 0.993 - -
78. slc16a12b ENSDARG00000089885 3744 0.993 - - - - - - 0.993 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
79. bin2a ENSDARG00000003219 1369 0.993 - - - - - - 0.993 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
80. rab1ba ENSDARG00000058044 5080 0.993 - - - - - - 0.993 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
81. loxl1 ENSDARG00000054451 2485 0.993 - - - - - - 0.993 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
82. CU463857.1 CU463857.1 5541 0.992 - - - - - - 0.992 - -
83. cx43.4 ENSDARG00000007099 16369 0.991 - - - - - - 0.991 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
84. psmd6 ENSDARG00000070674 4675 0.991 - - - - - - 0.991 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
85. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.991 - - - - - - 0.991 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
86. lgals3l lgals3l 3833 0.991 - - - - - - 0.991 - -
87. lamc1 ENSDARG00000036279 11025 0.991 - - - - - - 0.991 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
88. rnaseka ENSDARG00000069461 10304 0.991 - - - - - - 0.991 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
89. mat2aa ENSDARG00000040334 10769 0.989 - - - - - - 0.989 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
90. oaz1a ENSDARG00000071403 21112 0.988 - - - - - - 0.988 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
91. snd1 ENSDARG00000006766 12906 0.987 - - - - - - 0.987 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
92. IDH2 ENSDARG00000003795 18659 0.986 - - - - - - 0.986 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
93. ywhaba ENSDARG00000013078 42000 0.985 - - - - - - 0.985 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
94. suclg1 ENSDARG00000052712 17570 0.983 - - - - - - 0.983 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
95. glceb ENSDARG00000068981 2100 0.98 - - - - - - - - 0.980 glucuronic acid epimerase b [Source:ZFIN;Acc:ZDB-GENE-040630-8]
96. ENSDARG00000070355 ENSDARG00000070355 8316 0.978 - - - - - - 0.978 - -
97. atp5e 14858 0.969 - 0.969 - - - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
98. khdrbs1a ENSDARG00000052856 53666 0.964 - - - - - - 0.964 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
99. f11r f11r 16668 0.964 - - - - - - - - 0.964
100. tfam ENSDARG00000063145 4524 0.963 - - - - - - - - 0.963 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]

There are 800 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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