Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbmx

Gene Name Gene ID Reads Annotation
rbmx ENSDARG00000014244 3445 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]










Genes with expression patterns similar to rbmx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbmx ENSDARG00000014244 3445 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
2. myef2 ENSDARG00000059398 6050 3.805 - 0.783 - - 0.741 0.761 0.745 - 0.775 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
3. eif4h ENSDARG00000042252 6742 3.097 - 0.746 - - - 0.802 0.728 - 0.821 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
4. arhgef2 ENSDARG00000075819 2173 3.065 0.763 0.756 0.773 - - - - - 0.773 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
5. sumo3a ENSDARG00000028119 13447 2.414 - - - - - 0.728 0.852 - 0.834 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
6. ddx39ab ENSDARG00000015111 11619 2.369 - 0.843 - - - - 0.743 - 0.783 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
7. lypla2 ENSDARG00000053656 8971 2.351 - - - - 0.791 - 0.770 - 0.790 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
8. Sep-06 Sep-06 5465 2.345 - 0.808 - - - - 0.757 - 0.780
9. TAF15 ENSDARG00000070019 5102 2.333 - 0.721 - - - - 0.799 - 0.813 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
10. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.323 - - 0.731 - - 0.786 - - 0.806 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
11. SERBP1 SERBP1 9276 2.322 - 0.736 - - - 0.760 0.826 - -
12. kpnb3 ENSDARG00000040245 7967 2.317 0.807 0.805 - - - 0.705 - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
13. GABARAP GABARAP 8341 2.315 - 0.821 - - - 0.757 0.737 - -
14. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.311 - 0.768 - - - - 0.767 - 0.776 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
15. khsrp ENSDARG00000026489 15738 2.305 - - - - - 0.737 0.831 - 0.737 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
16. srsf6b ENSDARG00000016783 9926 2.303 - - - - 0.721 0.769 0.813 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
17. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.3 - 0.733 - - - - 0.857 - 0.710 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
18. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 2.298 - - - 0.700 - - 0.842 - 0.756 histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
19. stox2a ENSDARG00000070162 1620 2.289 - - - - - 0.713 0.814 - 0.762 storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
20. erc1b ENSDARG00000031930 3670 2.284 0.734 0.753 - - - - 0.797 - - ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
21. hnrpl 6412 2.271 - - - - - - 0.761 0.706 0.804 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
22. tenm3 ENSDARG00000005479 3799 2.247 - 0.746 - - - 0.735 0.766 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
23. pak2b ENSDARG00000018476 4331 2.231 - 0.728 - - - - 0.791 - 0.712 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
24. arglu1a ENSDARG00000019223 8716 2.215 - 0.729 - - - 0.763 0.723 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
25. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 2.208 - - - - - 0.713 0.776 - 0.719 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
26. CABZ01080568.2 CABZ01080568.2 2137 2.2 - 0.706 - - - - 0.727 - 0.767
27. srsf9 ENSDARG00000008097 2405 2.194 0.720 0.744 0.730 - - - - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
28. g3bp1 ENSDARG00000017741 7622 2.184 - 0.703 - - - - 0.726 - 0.755 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
29. mybl2 mybl2 1341 2.152 - - 0.715 - - - 0.729 - 0.708
30. atf7ip ENSDARG00000069619 5495 1.711 - 0.872 - - - - 0.839 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
31. stmn1a ENSDARG00000004169 21169 1.68 - - - - - - 0.887 - 0.793 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
32. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 1.678 - - - - - - 0.825 - 0.853 pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
33. drap1 ENSDARG00000041203 6749 1.653 - 0.877 - - 0.776 - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
34. ube2nb ENSDARG00000045877 4583 1.649 - 0.893 - - - 0.756 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
35. snrpf ENSDARG00000105037 10241 1.638 - - - - - 0.798 0.840 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
36. sf1 ENSDARG00000008188 5142 1.634 - - - - - 0.804 - - 0.830 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
37. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.63 - - - - - - 0.768 - 0.862 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
38. apex1 ENSDARG00000045843 6345 1.624 - 0.857 - - - - 0.767 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
39. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.618 - - - - - - 0.742 - 0.876 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
40. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.61 - - - - - - 0.800 - 0.810 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
41. npm1b ENSDARG00000037675 5448 1.601 - - - - - 0.744 0.857 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
42. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.598 - - - - - 0.781 - - 0.817 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
43. emc6 ENSDARG00000035282 4981 1.596 - 0.865 - - - 0.731 - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
44. eftud2 ENSDARG00000012261 3081 1.595 - 0.758 - - - - - - 0.837 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
45. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.594 - - - - - 0.867 - - 0.727 transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
46. tcea1 ENSDARG00000003531 2912 1.592 - - - - - - 0.800 - 0.792 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
47. atad2b ENSDARG00000060537 3050 1.591 - 0.825 - - - - - - 0.766 ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
48. BX511086.1 BX511086.1 8308 1.59 - 0.788 - - - - 0.802 - -
49. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.588 - - - - 0.712 - 0.876 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
50. grsf1 ENSDARG00000053021 2752 1.588 0.713 0.875 - - - - - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
51. pcbp2 ENSDARG00000099039 4248 1.588 - 0.746 - - - 0.842 - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
52. ldb1a ENSDARG00000010137 3035 1.586 - - - - - - 0.717 - 0.869 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
53. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.585 - - - - 0.704 - 0.881 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
54. rbm25 rbm25 3629 1.584 0.754 - - - - - - - 0.830
55. prpf40a ENSDARG00000058467 6565 1.582 - - - - - - 0.796 - 0.786 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
56. tra2a ENSDARG00000007863 4449 1.581 - - - - - 0.835 0.746 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
57. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.579 - 0.831 - - - - - - 0.748 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
58. sephs1 ENSDARG00000058292 3347 1.575 - - - - 0.707 - 0.868 - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
59. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.574 - 0.799 - - - - - - 0.775 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
60. mpp6b ENSDARG00000029761 2142 1.571 - 0.809 - - - - - - 0.762 membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
61. TRAK2 ENSDARG00000102471 2258 1.57 - - - - - - 0.766 - 0.804 trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
62. zgc:123105 ENSDARG00000003127 3061 1.568 - 0.738 - - - - 0.830 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
63. SNRPG ENSDARG00000099667 18697 1.568 - 0.729 - - - - - - 0.839 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
64. dlgap5 ENSDARG00000045167, ENSDARG00000109645 1466 1.567 - - - - - - 0.810 - 0.757 discs, large (Drosophila) homolog-associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-040912-160]
65. abi2b ENSDARG00000014875 2259 1.566 - - - - - 0.808 0.758 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
66. bcl11ab ENSDARG00000063153 3032 1.563 - - - - - 0.757 - - 0.806 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
67. HNRNPAB HNRNPAB 22267 1.559 - - - - - - 0.762 - 0.797
68. ncl ENSDARG00000002710 16951 1.556 - 0.766 - - - - - - 0.790 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
69. acvr1b acvr1b 2963 1.556 - - - - - - 0.726 - 0.830
70. rpa2 ENSDARG00000037188 4284 1.555 - 0.847 - - - - 0.708 - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
71. snrpd3l ENSDARG00000076283 7655 1.553 - - - - - - 0.744 - 0.809 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
72. igdcc4 ENSDARG00000076919 1303 1.553 - 0.734 - - - 0.819 - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
73. ubtf ENSDARG00000035066 4070 1.549 - - - - - 0.715 0.834 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
74. ppp6r3 ENSDARG00000013379 2912 1.548 - 0.810 - - - - 0.738 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
75. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.548 - - - - - 0.741 - - 0.807 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
76. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 1.547 - 0.749 - - - - - - 0.798 proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
77. u2af1 ENSDARG00000015325 3217 1.546 - 0.739 - - - - - - 0.807 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
78. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.546 0.753 - - - - - 0.793 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
79. si:ch211-196l7.4 ENSDARG00000095451 3766 1.546 - 0.762 - - - - - - 0.784 si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
80. cbx3a ENSDARG00000003860 4922 1.546 - 0.831 - - - - - - 0.715 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
81. psmd7 ENSDARG00000102417 4732 1.543 - 0.809 - - - - - - 0.734 proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
82. smek1 ENSDARG00000042187 3509 1.54 - 0.808 - - - - - - 0.732 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
83. snrpa ENSDARG00000018890 4593 1.54 - 0.753 - - - - - - 0.787 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
84. whsc1l1 8544 1.539 - - - - 0.744 - - - 0.795 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
85. thbs1b ENSDARG00000010785 3095 1.539 0.751 0.788 - - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
86. CR388231.3 ENSDARG00000105601 2404 1.538 - 0.751 - - - - 0.787 - -
87. ezh2 ENSDARG00000010571 3273 1.537 - - - - - - 0.745 - 0.792 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
88. tgif1 ENSDARG00000059337 4020 1.537 - - - - - - 0.778 - 0.759 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
89. ndrg3a ENSDARG00000013087 5581 1.536 - - - - - 0.749 0.787 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
90. SCAF8 1618 1.535 - 0.805 - - - - - - 0.730 SR-related CTD-associated factor 8, transcript variant X3
91. ccnt1 ENSDARG00000017525 1888 1.535 - - - 0.751 - - - - 0.784 cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
92. rac1 rac1 7341 1.535 - 0.784 - - - - 0.751 - -
93. mbd3a ENSDARG00000061774 4047 1.534 - 0.832 - - - - - - 0.702 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
94. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.531 - - - - - - 0.730 - 0.801 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
95. ALMS1 ENSDARG00000074779 900 1.53 - - - 0.769 - - - - 0.761 Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]
96. rnf2 ENSDARG00000010381 3427 1.528 - - - - - 0.809 0.719 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
97. u2af2b ENSDARG00000011740 6946 1.526 - - 0.709 - - - 0.817 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
98. hsbp1b ENSDARG00000041921 6170 1.524 - 0.781 - - - 0.743 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
99. wrb ENSDARG00000074271, ENSDARG00000110353 970 1.524 - - - - - 0.795 0.729 - - tryptophan rich basic protein [Source:ZFIN;Acc:ZDB-GENE-030131-7696]
100. lbr ENSDARG00000014013 4835 1.524 - 0.733 - - - - - - 0.791 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]

There are 1622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA