Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbms3

Gene Name Gene ID Reads Annotation
rbms3 ENSDARG00000044574 2514 RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]










Genes with expression patterns similar to rbms3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbms3 ENSDARG00000044574 2514 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
2. tbl1xr1a ENSDARG00000058696 5439 2.465 - 0.719 0.978 - - - 0.768 - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
3. tcf7l1b ENSDARG00000007369 2785 2.412 - - - - - 0.859 0.823 - 0.730 transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
4. flrt3 ENSDARG00000076895 3516 2.368 - - - 0.856 - 0.797 - - 0.715 fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
5. neo1 neo1 4056 2.351 - 0.760 - - - 0.820 - - 0.771
6. zswim5 ENSDARG00000055900 4243 2.338 - - - - - 0.861 0.766 - 0.711 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
7. bmpr2a ENSDARG00000011941 2972 2.338 - - - - - 0.807 0.795 - 0.736 bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
8. pum1 ENSDARG00000099256 5017 2.239 - - - - - 0.732 0.735 - 0.772 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
9. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.226 - - - - - 0.786 0.740 - 0.700 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
10. ddx19 ENSDARG00000005699 4602 2.145 - - - - - 0.721 0.722 - 0.702 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
11. npm1b ENSDARG00000037675 5448 1.739 - - - - - 0.877 0.862 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
12. slc1a6 ENSDARG00000010096 764 1.673 - - 0.892 - - - 0.781 - - solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
13. supt16h ENSDARG00000079949 4755 1.658 - - 0.851 - - - 0.807 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
14. tnni2a.2 ENSDARG00000005841 483 1.656 - - - 0.832 - 0.824 - - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
15. slc25a44b ENSDARG00000035905 968 1.653 - - - - - 0.795 0.858 - - solute carrier family 25, member 44 b [Source:ZFIN;Acc:ZDB-GENE-050320-89]
16. fscn1a ENSDARG00000059680 3999 1.652 - - - - - 0.829 0.823 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
17. asna1 ENSDARG00000018190 5253 1.641 - - 0.869 - - 0.772 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
18. scrt2 ENSDARG00000056175 4331 1.641 - - 0.875 - - 0.766 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
19. nxf1 ENSDARG00000055076 3251 1.639 - - - - - 0.818 0.821 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
20. sumo3a ENSDARG00000028119 13447 1.634 - - - - - 0.869 0.765 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
21. nanos1 ENSDARG00000109337 2494 1.634 - - 0.886 - - - 0.748 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
22. ftr67 ENSDARG00000098820 611 1.633 - - - 0.852 - 0.781 - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
23. dopey1 438 1.632 - - - 0.763 - 0.869 - - - dopey family member 1, transcript variant X4
24. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.629 - - - - - 0.801 0.828 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
25. bcr ENSDARG00000079286 578 1.623 - - - 0.792 - 0.831 - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
26. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.619 - - - - - 0.789 0.830 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
27. cplx4b ENSDARG00000059486 3192 1.614 - - - 0.849 - - - - 0.765 complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
28. rnaseh2a ENSDARG00000018891 1979 1.612 - - 0.799 - - - 0.813 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
29. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.61 - - - - - 0.865 0.745 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
30. mrps18a ENSDARG00000024465 5187 1.605 - - 0.862 - - - 0.743 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
31. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.605 - 0.724 - - - 0.881 - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
32. hcfc1b ENSDARG00000012519 3633 1.605 - - - - - 0.853 0.752 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
33. synj1 ENSDARG00000025011, ENSDARG00000110664, ENSDARG00000111319 542 1.603 - - - - - 0.866 0.737 - - synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]
34. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.603 - - 0.889 - - 0.714 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
35. PLEKHH3 ENSDARG00000070174 2117 1.598 - - 0.887 - - 0.711 - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
36. gtpbp10 ENSDARG00000040300 533 1.596 - - - 0.781 - 0.815 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
37. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.595 - - - 0.782 - 0.813 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
38. lrrc40 ENSDARG00000017708 1156 1.595 - - - 0.751 - - 0.844 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
39. ctbp2 ctbp2 3255 1.593 - - - - - 0.847 0.746 - -
40. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.59 - - - - - 0.862 0.728 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
41. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.589 - - - - - 0.869 0.720 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
42. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.589 - - - - - 0.794 0.795 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
43. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.588 - - 0.886 - - - 0.702 - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
44. ap2s1 ENSDARG00000026967 18613 1.581 - - 0.832 - - 0.749 - - - adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
45. TTYH1 ENSDARG00000076804 399 1.579 - - - 0.799 - 0.780 - - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
46. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 1.578 - - - - - 0.790 - - 0.788 dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
47. si:ch211-173p18.3 ENSDARG00000035821 1917 1.577 - 0.777 - - - 0.800 - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
48. usb1 ENSDARG00000003841 524 1.577 - - - 0.821 - 0.756 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
49. puf60a ENSDARG00000032175 5618 1.576 - - - - - - 0.865 - 0.711 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
50. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.576 - - - - - 0.842 0.734 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
51. creb1a ENSDARG00000053586 5068 1.575 - - 0.863 - - 0.712 - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
52. srcap ENSDARG00000005236 1740 1.574 - - - - - 0.798 0.776 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
53. foxo3b ENSDARG00000042904 5046 1.573 - - 0.870 - - - 0.703 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
54. wu:fb30e12 wu:fb30e12 1254 1.571 - - - - - 0.808 0.763 - -
55. SERBP1 SERBP1 9276 1.569 - - - - - 0.785 0.784 - -
56. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.566 - - - - - 0.865 0.701 - - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
57. sap30bp ENSDARG00000031261 1348 1.566 - 0.722 - - - 0.844 - - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
58. rab6bb ENSDARG00000031343 1381 1.562 - - - 0.707 - 0.855 - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
59. pias4a ENSDARG00000007081 4264 1.561 - - 0.846 0.715 - - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
60. znf865 ENSDARG00000036698 15532 1.557 - - - - - 0.706 0.851 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
61. npr1a ENSDARG00000031751 517 1.556 - - - - - 0.725 0.831 - - natriuretic peptide receptor 1a [Source:ZFIN;Acc:ZDB-GENE-060503-539]
62. LRRC8A LRRC8A 406 1.555 - - - - - 0.835 0.720 - -
63. CABZ01072954.1 CABZ01072954.1 2330 1.554 - - - - - 0.845 0.709 - -
64. CR936200.1 CR936200.1 327 1.55 - - - 0.753 - 0.797 - - -
65. uggt1 ENSDARG00000054746 2060 1.55 - 0.782 - - - - 0.768 - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
66. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.55 - - - - - 0.712 0.838 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
67. irx3b ENSDARG00000031138 2538 1.548 - - - - - 0.714 0.834 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
68. myo1b ENSDARG00000024694 1761 1.547 - - - - - 0.789 0.758 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
69. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.545 - - - - - 0.783 0.762 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
70. jazf1a ENSDARG00000102551 767 1.545 - - - - - 0.788 0.757 - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
71. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.543 - - - - - - 0.807 - 0.736 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
72. nfyba ENSDARG00000039185 1804 1.543 - - - - - 0.788 0.755 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
73. RBM6 ENSDARG00000077060 3521 1.543 - - - 0.808 - 0.735 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
74. skia ENSDARG00000042151 1850 1.543 - - - 0.827 - - - - 0.716 v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
75. fut8 fut8 652 1.542 - - - 0.772 - 0.770 - - -
76. ptbp2b ENSDARG00000015901 2458 1.541 - - - - - 0.767 0.774 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
77. abi2b ENSDARG00000014875 2259 1.541 - - - - - 0.817 0.724 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
78. calhm2 ENSDARG00000039482 138 1.54 - - - 0.798 - 0.742 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
79. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 1.54 - - - - - 0.805 - - 0.735 zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
80. wdr54 ENSDARG00000010248 245 1.539 - - - 0.797 - - 0.742 - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
81. TMEM185A TMEM185A 5505 1.539 - - - - - 0.822 0.717 - -
82. mllt10 ENSDARG00000045401 7557 1.532 - - - - - 0.828 0.704 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
83. tmsb ENSDARG00000054911 6411 1.531 - - - - - 0.827 0.704 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
84. eif2s1b ENSDARG00000052178 11961 1.527 - - 0.793 - - - 0.734 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
85. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.526 - - 0.799 - - - 0.727 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
86. sorbs1 ENSDARG00000103435 2297 1.526 - - - 0.800 - - 0.726 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
87. ipo7 ENSDARG00000035751 7095 1.525 - 0.704 - - - - 0.821 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
88. uso1 ENSDARG00000019581 479 1.522 - - - 0.783 - - 0.739 - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
89. setd1a ENSDARG00000060030 874 1.521 - - - - - 0.803 0.718 - - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
90. khsrp ENSDARG00000026489 15738 1.52 - - - - - 0.815 0.705 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
91. hoxd10a ENSDARG00000057859 1498 1.519 - 0.743 - - - - 0.776 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
92. smarce1 ENSDARG00000016871 9628 1.518 - - - - - 0.817 0.701 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
93. CYTH2 ENSDARG00000028800 2349 1.517 - - - - - 0.814 0.703 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
94. WDR77 2463 1.517 - 0.725 0.792 - - - - - - WD repeat domain 77
95. magi1b ENSDARG00000003169 2056 1.515 - - - - - 0.778 0.737 - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
96. plxna4 ENSDARG00000019328 782 1.514 0.762 - - - - 0.752 - - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
97. strada ENSDARG00000037929 1614 1.514 - 0.813 - - - - 0.701 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
98. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.513 - - - - - 0.740 0.773 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
99. si:dkey-67c22.2 ENSDARG00000055389 6410 1.513 - - - - - 0.787 0.726 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
100. exoc6 ENSDARG00000020521 1533 1.512 - - - - - 0.778 0.734 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]

There are 2044 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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