Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbms1a

Gene Name Gene ID Reads Annotation
rbms1a ENSDARG00000074023 2742 RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]










Genes with expression patterns similar to rbms1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbms1a ENSDARG00000074023 2742 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
2. hoxb3a ENSDARG00000029263 5493 1.951 - - - - 0.953 - 0.998 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
3. ndufb8 ENSDARG00000010113 11385 1.911 - - - - 0.925 - 0.986 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
4. si:dkey-13i19.8 ENSDARG00000093058 4617 1.79 - 0.811 - - - - 0.979 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
5. dnajc8 ENSDARG00000059373 1858 1.784 - 0.785 - - - - 0.999 - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
6. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 1.781 - 0.782 - - - - 0.999 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
7. slc35d2 ENSDARG00000089837 1606 1.775 - 0.783 - - 0.992 - - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
8. mtmr14 ENSDARG00000059642 1405 1.769 - 0.770 - - - - 0.999 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
9. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.758 - - - - - 0.760 0.998 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
10. cd276 ENSDARG00000003061 2798 1.754 - - - - - - 0.999 0.755 - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
11. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 1.752 - 0.761 - - 0.991 - - - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
12. SERP1_1 ENSDARG00000076223 6668 1.75 - 0.789 - - 0.961 - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
13. fundc2 ENSDARG00000103740 3856 1.742 - 0.745 - - - - 0.997 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
14. edf1 ENSDARG00000009950 10518 1.719 - - - - - 0.729 0.990 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
15. ube2e3 ENSDARG00000012244 8909 1.715 - - - - 0.957 0.758 - - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
16. ctnnb1 ENSDARG00000014571 12004 1.701 - 0.707 - - - - 0.994 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
17. hyou1 ENSDARG00000013670 4172 1.689 - 0.710 - - 0.979 - - - - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
18. ptenb ENSDARG00000056623 5783 1.689 - 0.824 - - 0.865 - - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
19. scaf1 ENSDARG00000054010 3752 1.636 - 0.802 - - - 0.834 - - - SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
20. srrm1 ENSDARG00000001244 4972 1.537 - 0.700 - - 0.837 - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
21. MXD4 ENSDARG00000054031 1165 1.519 - 0.802 - - - 0.717 - - - MAX dimerization protein 4 [Source:ZFIN;Acc:ZDB-GENE-050208-44]
22. cited4a ENSDARG00000035990 2762 1.517 - 0.775 - - - 0.742 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
23. G3BP2 ENSDARG00000014790 9380 1.487 - 0.705 - - - 0.782 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
24. cyp20a1 ENSDARG00000006040 2570 1.465 - 0.724 - - 0.741 - - - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
25. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.455 - 0.722 - - - 0.733 - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
26. hsbp1b ENSDARG00000041921 6170 1.454 - 0.709 - - 0.745 - - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
27. smad1 ENSDARG00000027199, ENSDARG00000112617, ENSDARG00000115674 2791 1.44 0.703 0.737 - - - - - - - SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]
28. irf2bp2a ENSDARG00000004702 6719 1.431 - 0.730 - - - - - 0.701 - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
29. pik3c2a ENSDARG00000060841 785 1.41 - 0.703 - - - 0.707 - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-030328-39]
30. ZNF462 ENSDARG00000112909 1132 1 - - - - - - 1.000 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
31. ARHGAP35 2409 1 - - - - - - 1.000 - - Rho GTPase activating protein 35b, transcript variant X2
32. echdc2 ENSDARG00000016607 719 1 - - - - - - 1.000 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
33. galnt11 ENSDARG00000063636 1188 1 - - - - - - 1.000 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
34. arrdc3a ENSDARG00000052690 2280 1 - - - - - - 1.000 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
35. adssl ENSDARG00000012399 2271 1 - - - - - - 1.000 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
36. med6 ENSDARG00000034734 2711 0.999 - - - - - - 0.999 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
37. kif5aa ENSDARG00000098936 2428 0.999 - - - - - - 0.999 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
38. fbl ENSDARG00000053912 5891 0.999 - - - - - - 0.999 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
39. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.999 - - - - - - 0.999 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
40. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.999 - - - - - - 0.999 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
41. degs1 ENSDARG00000007347 2481 0.999 - - - - - - 0.999 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
42. cux2b ENSDARG00000086345 519 0.999 - - - - - - 0.999 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
43. prkacba ENSDARG00000001782 1340 0.999 - - - - - - 0.999 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
44. dkk2 ENSDARG00000076420 553 0.999 - - - - - - 0.999 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
45. irx3a ENSDARG00000101076 3106 0.999 - - - - - - 0.999 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
46. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.999 - - - - - - 0.999 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
47. mapk6 ENSDARG00000032103 6422 0.999 - - - - - - 0.999 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
48. CU457815.1 ENSDARG00000115823 1005 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
49. TNRC18 ENSDARG00000077052 1095 0.999 - - - - - - 0.999 - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
50. zbtb18 ENSDARG00000028228 3653 0.999 - - - - - - 0.999 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
51. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.999 - - - - - - 0.999 - -
52. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.999 - - - - - - 0.999 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
53. CAMK2G CAMK2G 3537 0.999 - - - - - - 0.999 - -
54. C20H2orf44 C20H2orf44 486 0.999 - - - - - - 0.999 - -
55. h1fx ENSDARG00000054058 4075 0.999 - - - - - - 0.999 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
56. pigo ENSDARG00000011743 928 0.999 - - - - - - 0.999 - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
57. inpp5e ENSDARG00000103926 567 0.999 - - - - - - 0.999 - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
58. igfbp1a ENSDARG00000099351 1717 0.999 - - - - - - 0.999 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
59. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.999 - - - - - - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
60. lgi2a ENSDARG00000111069 965 0.999 - - - - - - 0.999 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
61. CR388132.2 ENSDARG00000104041 640 0.999 - - - - - - 0.999 - -
62. SH3BGRL ENSDARG00000058302 4525 0.999 - - - - - - 0.999 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
63. AP2A1 ENSDARG00000054320 5591 0.999 - - - - - - 0.999 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
64. CABZ01075242.1_1 ENSDARG00000114227 1012 0.999 - - - - - - 0.999 - -
65. GPANK1 ENSDARG00000053995 1535 0.999 - - - - - - 0.999 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
66. TUBB8P7 TUBB8P7 1353 0.999 - - - - - - 0.999 - -
67. prkag1 ENSDARG00000003818 2800 0.999 - - - - - - 0.999 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
68. SLC29A4 ENSDARG00000059690 470 0.999 - - - - - - 0.999 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
69. USP31 ENSDARG00000074017 628 0.999 - - - - - - 0.999 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
70. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.999 - - - - - - 0.999 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
71. elmo1 ENSDARG00000098753 6966 0.998 - - - - - - 0.998 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
72. mapre1b ENSDARG00000002659 9119 0.998 - - - - - - 0.998 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
73. timm13 ENSDARG00000058297 4447 0.998 - - - - - - 0.998 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
74. ywhaqa ENSDARG00000042539 7034 0.998 - - - - - - 0.998 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
75. snrnp27 ENSDARG00000035625 9080 0.998 - - - - - - 0.998 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
76. zranb2 ENSDARG00000044332 6723 0.998 - - - - - - 0.998 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
77. pfkma ENSDARG00000014179 1293 0.998 - - - - - - 0.998 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
78. arf6b ENSDARG00000052928 4585 0.998 - - - - - - 0.998 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
79. vamp2 ENSDARG00000056877 2158 0.998 - - - - - - 0.998 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
80. TNRC6C_1 TNRC6C_1 6574 0.998 - - - - - - 0.998 - -
81. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 0.998 - - - - - - 0.998 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
82. ctdsp1 ENSDARG00000040674 2828 0.998 - - - - - - 0.998 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
83. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 0.998 - - - - - - 0.998 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
84. gys1 ENSDARG00000016875 2037 0.997 - - - - - - 0.997 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
85. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.997 - - - - - - 0.997 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
86. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.997 - - - - - - 0.997 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
87. grpel2 ENSDARG00000069421 5673 0.997 - - - - - - 0.997 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
88. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 0.997 - - - - - - 0.997 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
89. meis1 meis1 6937 0.997 - - - - - - 0.997 - -
90. ppa1b ENSDARG00000030441 9027 0.996 - - - - - - 0.996 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
91. si:ch73-110p20.1 5932 0.996 - - - - - - 0.996 - - si:ch73-110p20.1
92. zgc:110339 ENSDARG00000046030 8180 0.996 - - - - - - 0.996 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
93. fubp1 ENSDARG00000029248 15259 0.996 - - - - - - 0.996 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
94. tob1b ENSDARG00000021372 7048 0.996 - - - - - - 0.996 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
95. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.996 - - - - - - 0.996 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
96. si:rp71-45k5.4 ENSDARG00000035679 10411 0.994 - - - - - - 0.994 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
97. drgx ENSDARG00000069329 610 0.994 - - - - 0.994 - - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
98. ift140 ENSDARG00000031886 573 0.993 - - - - 0.993 - - - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
99. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.993 - - - - 0.993 - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
100. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.993 - - - - 0.993 - - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]

There are 636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA