Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbm8a

Gene Name Gene ID Reads Annotation
rbm8a ENSDARG00000016516 8789 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]










Genes with expression patterns similar to rbm8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm8a ENSDARG00000016516 8789 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
2. brms1la ENSDARG00000006235 2011 2.699 - - 0.981 - 0.815 - - 0.903 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
3. ube2v1 ENSDARG00000041875 5739 2.627 - 0.905 - - 0.848 - - - 0.874 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
4. rbm4.2 ENSDARG00000055080 5241 2.616 0.896 - - - 0.857 - - 0.863 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
5. nsd1a ENSDARG00000060016 2974 2.583 - - - - - 0.830 0.880 - 0.873 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
6. klc2 3058 2.537 - - - - - 0.719 - 0.874 0.944 kinesin light chain 2
7. spcs2 ENSDARG00000042823 10032 2.509 - - - - 0.803 - 0.908 0.798 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
8. ephb4a ENSDARG00000100725 1749 2.506 - - - - 0.786 - 0.816 - 0.904 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
9. ywhaqa ENSDARG00000042539 7034 2.488 - 0.888 0.880 - - - - 0.720 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
10. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.475 0.877 - - - - - 0.730 0.868 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
11. snrpb ENSDARG00000011125 11729 2.473 0.830 - - - - - 0.751 0.892 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
12. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 2.471 - - - - 0.891 - 0.800 - 0.780 myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
13. cenpe ENSDARG00000063385 4428 2.464 0.742 0.896 - - 0.826 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
14. tmem258 ENSDARG00000078785 9578 2.462 0.874 - - - - - 0.735 - 0.853 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
15. b3gnt2b ENSDARG00000091902 4125 2.405 0.727 0.891 - - - - - - 0.787 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
16. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 2.401 - - - - - - 0.714 0.793 0.894 ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
17. cdv3 ENSDARG00000023028 12380 2.394 0.791 - 0.901 - - - 0.702 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
18. sf3b2 ENSDARG00000018049 4675 2.374 - - - - 0.813 - 0.776 - 0.785 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
19. wsb1 ENSDARG00000021343 3828 2.359 - - - - - 0.732 0.767 - 0.860 WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
20. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.347 - - - - 0.762 - 0.712 0.873 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
21. kif22 ENSDARG00000102624 3694 2.283 - - - - 0.774 - 0.729 0.780 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
22. sin3b ENSDARG00000062472 2025 2.281 - - - - 0.783 0.774 0.724 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
23. arpc1b ENSDARG00000027063 1532 2.255 - - - - - - 0.745 0.724 0.786 actin related protein 2/3 complex, subunit 1B [Source:ZFIN;Acc:ZDB-GENE-030131-7414]
24. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.906 - - 0.976 - - - - 0.930 -
25. PEG3_5 PEG3_5 1624 1.9 - - 0.978 - - - - - 0.922
26. thoc2 ENSDARG00000037503 8711 1.876 - 0.891 0.985 - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
27. schip1 ENSDARG00000035175 3838 1.874 - - 0.971 - - - - - 0.903 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
28. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.871 - - 0.978 - - - - 0.893 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
29. LPL_1 LPL_1 1150 1.86 - - 0.975 - - - - 0.885 -
30. si:dkey-82i20.5 ENSDARG00000116717 2965 1.857 - - 0.964 - - - - - 0.893 si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
31. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.85 0.924 - - - - - - - 0.926 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
32. id3 ENSDARG00000054823 3484 1.821 - 0.967 - - - - - - 0.854 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
33. MON2 ENSDARG00000099798 2359 1.817 - - 0.978 - - - - 0.839 - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
34. fam192a ENSDARG00000041631 4113 1.815 0.918 0.897 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
35. s100u ENSDARG00000071014 4754 1.813 - 0.893 0.920 - - - - - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
36. atp2b4 5891 1.809 0.928 - - - - - 0.881 - - ATPase, Ca++ transporting, plasma membrane 4
37. gorasp1 gorasp1 3075 1.789 0.890 - - - - - - - 0.899
38. farsa ENSDARG00000098825 2813 1.789 0.907 - - - - - - 0.882 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
39. derl1 ENSDARG00000021905 4698 1.777 - - 0.903 - - - 0.874 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
40. CABZ01013938.1 CABZ01013938.1 4497 1.777 - - 0.981 - - - - 0.796 -
41. uqcrfs1 ENSDARG00000007745 4654 1.77 0.874 0.896 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
42. dido1 ENSDARG00000057940 3819 1.77 - 0.894 - - - - - 0.876 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
43. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.769 - - - - - - 0.832 0.937 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
44. UBE2QL1 ENSDARG00000079276 3474 1.766 - - 0.979 - 0.787 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
45. rab5aa ENSDARG00000018602 8947 1.764 - 0.890 - - - - - 0.874 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
46. ipo7 ENSDARG00000035751 7095 1.762 0.850 - 0.912 - - - - - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
47. ube2i ube2i 13024 1.758 0.872 - - - - - - 0.886 -
48. ccng2 ENSDARG00000017602 3141 1.756 - 0.897 - - - - - - 0.859 cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
49. psma2 ENSDARG00000040121 2504 1.754 - - - - - - 0.877 0.877 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
50. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.753 0.898 - - - - - - - 0.855 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
51. nme3 ENSDARG00000100990 3889 1.745 - - - - - - - 0.840 0.905 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
52. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.743 0.915 - - - - - 0.828 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
53. arf6b ENSDARG00000052928 4585 1.741 - - - - - - - 0.867 0.874 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
54. U6 U6 931 1.741 - - - - - - - 0.864 0.877
55. agpat4 ENSDARG00000069044 4487 1.739 0.903 - - - - - - 0.836 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
56. myeov2 3351 1.737 0.902 - - - - - 0.835 - - myeloma overexpressed 2
57. cox14 ENSDARG00000092124 2229 1.734 0.913 - - - - - - 0.821 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
58. arih2 ENSDARG00000012848 7087 1.732 - - - - - - 0.848 0.884 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
59. ppig ENSDARG00000044431 3427 1.731 0.906 - - - - - 0.825 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
60. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.73 - 0.886 - - - - 0.844 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
61. THEM4 ENSDARG00000061621 364 1.728 - - - - - - - 0.884 0.844 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
62. atpaf1 ENSDARG00000042799 1309 1.728 - - 0.975 - - - 0.753 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
63. snrpe ENSDARG00000033175 7462 1.721 - - 0.942 - - - 0.779 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
64. eif5b ENSDARG00000016548 3972 1.72 - 0.912 - - 0.808 - - - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
65. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.715 0.899 - - - - - - - 0.816 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
66. lmnb2 ENSDARG00000101624 11304 1.715 0.751 0.964 - - - - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
67. tet2 ENSDARG00000076928 2190 1.714 0.897 - - - - - - 0.817 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
68. neo1 neo1 4056 1.713 0.916 - - - - - 0.797 - -
69. tmem181 ENSDARG00000045910 2288 1.711 - 0.897 - - - - - - 0.814 transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
70. pa2g4b ENSDARG00000070657 7999 1.709 - - 0.977 - - - 0.732 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
71. boc ENSDARG00000074335 4832 1.705 - - - - - - 0.814 0.891 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
72. elavl1 11672 1.704 - 0.903 - - - - - - 0.801 ELAV like RNA binding protein 1, transcript variant X3
73. ing2 ENSDARG00000104907 1336 1.704 - - - - - - 0.837 - 0.867 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
74. atf7ip ENSDARG00000069619 5495 1.703 - - 0.902 - - - - - 0.801 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
75. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 1.701 - - 0.978 - - - 0.723 - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
76. ghitm 1443 1.7 - - - - - 0.817 - 0.883 - growth hormone inducible transmembrane protein
77. wu:fc51f04 wu:fc51f04 7074 1.699 0.860 - - - 0.839 - - - -
78. sf3b1 ENSDARG00000056138 5785 1.698 - 0.889 - - - - 0.809 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
79. CR354611.2 CR354611.2 2040 1.698 - - - - - - 0.806 0.892 -
80. c1d ENSDARG00000021112 2839 1.696 - - - - - - 0.827 0.869 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
81. ptbp3 ENSDARG00000043757 6760 1.695 0.875 - - - - - 0.820 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
82. ZNF70_11 ZNF70_11 1246 1.694 - 0.909 - - - - 0.785 - -
83. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.691 0.916 - - - - - 0.775 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
84. tram1 ENSDARG00000019137, ENSDARG00000109629 8309 1.69 - 0.854 0.836 - - - - - - translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]
85. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.689 - - - - - - - 0.842 0.847 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
86. pgm1 ENSDARG00000013561 11984 1.688 0.766 - 0.922 - - - - - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
87. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.688 0.897 - - - - - 0.791 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
88. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.687 - - - - - - 0.751 - 0.936 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
89. GCA GCA 5211 1.687 0.885 - - - - - 0.802 - -
90. si:ch211-11k18.4 ENSDARG00000087869 3298 1.683 - - 0.909 - - - 0.774 - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
91. NAIF1_1 NAIF1_1 1336 1.679 - - - - - - 0.770 0.909 -
92. npepl1 ENSDARG00000012871 3064 1.677 0.917 - - - - - 0.760 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
93. oaz1a ENSDARG00000071403 21112 1.677 0.831 - - - - - - - 0.846 ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
94. dcun1d1 ENSDARG00000099642 2043 1.676 - - - - - 0.776 - 0.900 - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
95. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.676 - - - - 0.784 - - 0.892 - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
96. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.675 - 0.896 0.779 - - - - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
97. banf1 ENSDARG00000037009 16466 1.674 - - 0.950 - - - - - 0.724 barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
98. tead3a ENSDARG00000074321 2240 1.674 0.911 - - - - - 0.763 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
99. impdh1b ENSDARG00000029524 7472 1.673 - - - - - - - 0.850 0.823 IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
100. hexim1 ENSDARG00000036482 4317 1.672 - - - - 0.818 - 0.854 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]

There are 1856 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA