Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbm48

Gene Name Gene ID Reads Annotation
rbm48 ENSDARG00000033754 193 RNA binding motif protein 48 [Source:ZFIN;Acc:ZDB-GENE-060328-1]










Genes with expression patterns similar to rbm48

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm48 ENSDARG00000033754 193 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 48 [Source:ZFIN;Acc:ZDB-GENE-060328-1]
2. nsd1b ENSDARG00000060705 88 1.563 - - - - - 0.843 0.720 - - nuclear receptor binding SET domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-080519-2]
3. si:ch211-23l10.3 ENSDARG00000073998 113 1.562 - - - - - 0.820 0.742 - - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
4. MMADHC ENSDARG00000005870 212 1.549 - 0.773 - - - 0.776 - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
5. dpcd ENSDARG00000060501 479 1.513 - 0.758 - - - 0.755 - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-060825-166]
6. polr1b ENSDARG00000077469, ENSDARG00000115880 313 1.436 - 0.705 - - - - 0.731 - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
7. C3H17orf75 C3H17orf75 432 1.434 - - - - - 0.725 0.709 - -
8. dera ENSDARG00000005897 406 1.42 - 0.714 - - - - 0.706 - - deoxyribose-phosphate aldolase (putative) [Source:ZFIN;Acc:ZDB-GENE-041010-200]
9. CR391961.2 CR391961.2 107 1.416 0.705 - - - - 0.711 - - -
10. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.884 - - - - - 0.884 - - - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
11. edn2 ENSDARG00000070578 276 0.884 0.884 - - - - - - - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
12. TMEM150A TMEM150A 975 0.872 - - - - - - 0.872 - -
13. si:ch211-212k5.1 ENSDARG00000110637 337 0.862 - - - - - - 0.862 - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
14. C9H3orf38 C9H3orf38 83 0.859 - - - - - 0.859 - - -
15. zgc:158257 831 0.858 - 0.858 - - - - - - - zgc:158257
16. CUZD1_3 CUZD1_3 9 0.857 - - - - - 0.857 - - -
17. RDM1 RDM1 28 0.857 - - - - - 0.857 - - -
18. tspan4 tspan4 692 0.857 - 0.857 - - - - - - -
19. PHKA2 ENSDARG00000030687 280 0.853 0.853 - - - - - - - - phosphorylase kinase, alpha 2 (liver) [Source:ZFIN;Acc:ZDB-GENE-130422-1]
20. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.851 - - - - - 0.851 - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
21. prkcha ENSDARG00000018382 43 0.851 - - - - - 0.851 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
22. zgc:152891 ENSDARG00000016789 11 0.851 - - - - - 0.851 - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
23. pus10 ENSDARG00000079973 637 0.849 - - - - - 0.849 - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]
24. 5S_rRNA_20 5S_rRNA_20 79 0.847 - - - - - 0.847 - - -
25. tha1 ENSDARG00000076225 183 0.844 - - - - - 0.844 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
26. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 0.843 - 0.843 - - - - - - - growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
27. NRTN ENSDARG00000079849 77 0.841 - - - - - 0.841 - - - neurturin [Source:ZFIN;Acc:ZDB-GENE-100427-6]
28. FAM98C FAM98C 225 0.84 - - - - - - 0.840 - -
29. snx27b ENSDARG00000016977 2768 0.839 - - - - - - 0.839 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
30. si:ch73-386o14.1 si:ch73-386o14.1 82 0.838 - - - - - 0.838 - - -
31. C5HXorf56 C5HXorf56 880 0.836 - - - - - - 0.836 - -
32. rab4a ENSDARG00000019144 192 0.834 - - - - - - 0.834 - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
33. ipo4 ENSDARG00000041493 1578 0.83 - - - - - 0.830 - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
34. tmub1 ENSDARG00000038787 1012 0.828 - 0.828 - - - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
35. acss3 ENSDARG00000032218 226 0.828 - - - - - 0.828 - - - acyl-CoA synthetase short chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-816]
36. igf2bp2b ENSDARG00000099758, ENSDARG00000111268, ENSDARG00000116761 588 0.827 - 0.827 - - - - - - - insulin-like growth factor 2 mRNA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060503-536]
37. EPS8 78 0.825 - - - - - 0.825 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
38. si:dkey-247i3.3 si:dkey-247i3.3 297 0.825 - - - - - 0.825 - - -
39. lipeb ENSDARG00000101145 184 0.821 - - - - - - 0.821 - - lipase, hormone-sensitive b [Source:ZFIN;Acc:ZDB-GENE-100921-71]
40. tmtc4 ENSDARG00000020447 873 0.821 - - - - - 0.821 - - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
41. BX469922.1 BX469922.1 133 0.82 - - - - - - 0.820 - -
42. MFAP4_7 MFAP4_7 43 0.818 - - - - - - 0.818 - -
43. MANEAL ENSDARG00000056450 262 0.817 0.817 - - - - - - - - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
44. zgc:162962_1 ENSDARG00000116765 42 0.815 - - - - - 0.815 - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
45. lrrc32 ENSDARG00000040621 348 0.815 - 0.815 - - - - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
46. thumpd2 ENSDARG00000093070 154 0.815 - - - - - 0.815 - - - THUMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090428-2]
47. ano5a ENSDARG00000015731 601 0.815 - 0.815 - - - - - - - anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
48. C8H12orf43 C8H12orf43 50 0.814 - - - - - 0.814 - - -
49. slc45a1 ENSDARG00000004302 152 0.814 0.814 - - - - - - - - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
50. lmbrd2b ENSDARG00000017312 358 0.814 0.814 - - - - - - - - LMBR1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7197]
51. nr5a1a ENSDARG00000103176 12 0.813 - - - - - 0.813 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
52. nsmce1 ENSDARG00000098780 289 0.812 - - - - - - 0.812 - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
53. ARHGAP32_1 ARHGAP32_1 124 0.811 - - - - - - 0.811 - -
54. galnt18b ENSDARG00000059438 115 0.81 - - - - - 0.810 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b [Source:ZFIN;Acc:ZDB-GENE-091014-1]
55. alg1 ENSDARG00000054963 334 0.81 - - - - - - 0.810 - - ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-6093]
56. st5 ENSDARG00000037363, ENSDARG00000112276 1797 0.809 - 0.809 - - - - - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
57. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.808 - - - - - - 0.808 - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
58. NFATC2 NFATC2 88 0.808 - - - - - 0.808 - - -
59. TRPM4 TRPM4 60 0.807 - - - - - 0.807 - - -
60. ntf7 ntf7 72 0.806 - - - - - 0.806 - - -
61. rfx1a ENSDARG00000005883 148 0.805 0.805 - - - - - - - - regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]
62. wdtc1 ENSDARG00000059760 1218 0.805 - - - - - - 0.805 - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
63. atp1a1a.4 ENSDARG00000001870 1864 0.804 - 0.804 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
64. shox ENSDARG00000025891 338 0.801 - - - - - 0.801 - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
65. C20H8orf82 C20H8orf82 91 0.801 - - - - - 0.801 - - -
66. pank2 ENSDARG00000003311 881 0.799 - 0.799 - - - - - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
67. psmc3ip ENSDARG00000037892 214 0.798 - - - - - 0.798 - - - PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
68. BX908759.1 BX908759.1 52 0.798 - - - - - 0.798 - - -
69. itpa ENSDARG00000057529 104 0.798 - - - - - 0.798 - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
70. scly ENSDARG00000073813 578 0.798 - - - - - - 0.798 - - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
71. HECW2 HECW2 691 0.797 - - - - - - 0.797 - -
72. VOPP1_1 VOPP1_1 73 0.795 - - - - - 0.795 - - -
73. lppr5a lppr5a 38 0.795 - - - - - 0.795 - - -
74. cgnl1 ENSDARG00000015805 856 0.795 - 0.795 - - - - - - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
75. prkra ENSDARG00000076718 606 0.792 - - - - - 0.792 - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
76. gtf2f2a ENSDARG00000069910 1027 0.792 - - - - - - 0.792 - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
77. ift80 ENSDARG00000038879 283 0.791 - - - - - - 0.791 - - intraflagellar transport 80 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-50]
78. si:ch73-334d15.2 ENSDARG00000087020 441 0.791 - 0.791 - - - - - - - si:ch73-334d15.2 [Source:ZFIN;Acc:ZDB-GENE-091204-158]
79. etv2 ENSDARG00000053868 715 0.79 - 0.790 - - - - - - - ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
80. plcd3a ENSDARG00000052957 467 0.787 - - - - - - 0.787 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
81. phf16 phf16 1116 0.787 - 0.787 - - - - - - -
82. dhx57 ENSDARG00000057660 390 0.786 - 0.786 - - - - - - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
83. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.786 - 0.786 - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
84. DDHD1 DDHD1 250 0.785 - - - - - - 0.785 - -
85. ZDHHC21 ENSDARG00000110709 295 0.784 - - - - - 0.784 - - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
86. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.784 - - - - - - 0.784 - - transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
87. tyw5 ENSDARG00000069672, ENSDARG00000110022 255 0.784 - 0.784 - - - - - - - tRNA-yW synthesizing protein 5 [Source:ZFIN;Acc:ZDB-GENE-060929-894]
88. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.784 - - - - - - 0.784 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
89. pxk ENSDARG00000063195 851 0.783 - 0.783 - - - - - - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
90. zgc:123060 4 0.783 - - - - - 0.783 - - - zgc:123060
91. cdr2l ENSDARG00000026834 254 0.782 - - - - - - 0.782 - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
92. DENND1A ENSDARG00000014592 436 0.782 - - - - - - 0.782 - - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
93. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.781 - - - - - 0.781 - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
94. C8H1orf222 C8H1orf222 36 0.781 - - - - - - 0.781 - -
95. pdss2 ENSDARG00000012563 984 0.779 - - - - - 0.779 - - - prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43]
96. snrnp40 ENSDARG00000023160 1108 0.778 - 0.778 - - - - - - - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
97. sin3aa ENSDARG00000079716 580 0.777 - - - - - - 0.777 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
98. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.777 - - - - - 0.777 - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
99. snx30 ENSDARG00000069601 209 0.776 - - - - - - 0.776 - - sorting nexin family member 30 [Source:ZFIN;Acc:ZDB-GENE-050417-330]
100. ints10 ENSDARG00000043031 455 0.776 - - - - - 0.776 - - - integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]

There are 365 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA