Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbm41

Gene Name Gene ID Reads Annotation
rbm41 ENSDARG00000054096 498 RNA binding motif protein 41 [Source:ZFIN;Acc:ZDB-GENE-041114-107]










Genes with expression patterns similar to rbm41

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm41 ENSDARG00000054096 498 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 41 [Source:ZFIN;Acc:ZDB-GENE-041114-107]
2. plch2a ENSDARG00000059960 222 1.697 - - - 0.939 - 0.758 - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
3. CR735107.2 CR735107.2 476 1.691 - - - - - - 0.801 0.890 -
4. cog8 ENSDARG00000002798 229 1.684 - - - 0.876 - - - 0.808 - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
5. tsen15 ENSDARG00000069280 240 1.681 - 0.738 - 0.943 - - - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
6. si:dkey-58f10.7 ENSDARG00000091972, ENSDARG00000093350 152 1.656 - - - 0.881 - - 0.775 - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
7. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.633 - - - 0.897 - - - 0.736 - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
8. slc25a39 ENSDARG00000007449 630 1.61 - 0.859 - - - - 0.751 - - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
9. CU179656.1 ENSDARG00000107086 270 1.608 - - - 0.898 - - 0.710 - -
10. foxo1b ENSDARG00000061549 790 1.597 - - - 0.893 - - 0.704 - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
11. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 1.597 - - - 0.796 - - 0.801 - - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
12. cry3 cry3 483 1.592 - - - 0.806 - 0.786 - - -
13. foxq1b ENSDARG00000055395 549 1.573 - - - - - - 0.829 0.744 - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
14. si:dkey-183n20.15 ENSDARG00000094265 190 1.571 - - - - - - 0.830 0.741 - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
15. ssh2b ENSDARG00000098955 614 1.57 - - - 0.827 - - - 0.743 - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
16. stambpb ENSDARG00000086906 265 1.56 - - - 0.859 - 0.701 - - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
17. bspry ENSDARG00000104875 63 1.546 - - - - - 0.813 0.733 - - B-box and SPRY domain containing [Source:ZFIN;Acc:ZDB-GENE-060526-219]
18. isoc2 ENSDARG00000013371 1378 1.53 - 0.761 - 0.769 - - - - - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
19. slc25a44a ENSDARG00000045927 1067 1.527 - 0.777 - - - 0.750 - - - solute carrier family 25, member 44 a [Source:ZFIN;Acc:ZDB-GENE-041114-38]
20. tmem41b ENSDARG00000080006 1060 1.522 - 0.706 - - - - - 0.816 - transmembrane protein 41B [Source:ZFIN;Acc:ZDB-GENE-061215-138]
21. acot9.1 ENSDARG00000058352, ENSDARG00000114328 489 1.514 - - - 0.805 - - - 0.709 - acyl-CoA thioesterase 9, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-139]
22. SKA2 ENSDARG00000114038 1448 1.511 - - - - - - 0.776 0.735 - spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
23. C25H12orf4 C25H12orf4 317 1.505 - - - 0.800 - - - 0.705 -
24. gorab ENSDARG00000042031 483 1.505 - - - - - 0.773 - 0.732 - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
25. trappc11 ENSDARG00000004726 969 1.466 - 0.745 - 0.721 - - - - - trafficking protein particle complex 11 [Source:ZFIN;Acc:ZDB-GENE-030131-1723]
26. lin37 ENSDARG00000053950 1003 1.451 0.739 - - - - 0.712 - - - lin-37 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-050417-446]
27. fam175a fam175a 224 1.45 - - - - - - 0.715 0.735 -
28. emx2 ENSDARG00000039701 827 1.443 - - - - - 0.733 0.710 - - empty spiracles homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-990415-54]
29. ssx2ip ssx2ip 482 1.437 - 0.707 - - - 0.730 - - -
30. nsun2 ENSDARG00000056665 740 1.435 - 0.703 - - - - 0.732 - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
31. relb ENSDARG00000086173 762 1.43 - - - 0.722 - 0.708 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
32. efnb2b_1 ENSDARG00000074050 1094 1.406 - - - - - - 0.705 0.701 - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
33. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.962 - - - 0.962 - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
34. PLEKHG3 72 0.962 - - - 0.962 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
35. HAP1 HAP1 481 0.958 - - - 0.958 - - - - -
36. GMIP ENSDARG00000077249 43 0.954 - - - 0.954 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
37. zgc:154054 ENSDARG00000099923 19 0.953 - - - 0.953 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
38. 5S_rRNA_18 5S_rRNA_18 270 0.952 - - - 0.952 - - - - -
39. nlgn3b ENSDARG00000062376 171 0.951 - - - 0.951 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
40. zgc:173652 22 0.951 - - - 0.951 - - - - - zgc:173652
41. PHLDB2_1 PHLDB2_1 316 0.951 - - - 0.951 - - - - -
42. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.951 - - - 0.951 - - - - - kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
43. zgc:110353 ENSDARG00000039443 80 0.951 - - - 0.951 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
44. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.95 - - - 0.950 - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
45. si:dkeyp-82a1.6 ENSDARG00000094336 228 0.95 - - - 0.950 - - - - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
46. haao ENSDARG00000076487 143 0.947 - - - 0.947 - - - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
47. gpr173 ENSDARG00000042922 238 0.947 - - - 0.947 - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
48. amn1 ENSDARG00000070478, ENSDARG00000111705 72 0.947 - - - 0.947 - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
49. arhgap22 ENSDARG00000021255 117 0.946 - - - 0.946 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
50. nudt14 ENSDARG00000062335, ENSDARG00000111320 294 0.945 - - - 0.945 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 14 [Source:ZFIN;Acc:ZDB-GENE-041014-254]
51. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.943 - - - 0.943 - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
52. si:ch211-199g17.2 ENSDARG00000092310 243 0.943 - - - 0.943 - - - - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
53. zgc:172075 ENSDARG00000076146 93 0.943 - - - 0.943 - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
54. slmapb ENSDARG00000020764, ENSDARG00000117032 112 0.942 - - - 0.942 - - - - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
55. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 0.942 - - - 0.942 - - - - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
56. si:dkeyp-53d3.6 204 0.942 - - - 0.942 - - - - - si:dkeyp-53d3.6, transcript variant X1
57. FNIP2 FNIP2 593 0.94 - - - 0.940 - - - - -
58. fndc1 ENSDARG00000002847 178 0.938 - - - 0.938 - - - - - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
59. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.936 - - - 0.936 - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
60. trim109 ENSDARG00000062429 321 0.936 - - - 0.936 - - - - - tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]
61. adat3 ENSDARG00000005640 96 0.934 - - - 0.934 - - - - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
62. appl1 1019 0.934 - - - 0.934 - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
63. bnip2 ENSDARG00000013397 206 0.933 - - - 0.933 - - - - - BCL2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040109-6]
64. si:dkey-154b15.1 ENSDARG00000057010 85 0.933 - - - 0.933 - - - - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
65. si:dkey-42p8.3 1117 0.931 - - - 0.931 - - - - - si:dkey-42p8.3, transcript variant X1
66. GPR4 ENSDARG00000079479 92 0.931 - - - 0.931 - - - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
67. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 0.931 - - - 0.931 - - - - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
68. pus7l_1 ENSDARG00000069780 49 0.931 - - - 0.931 - - - - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
69. mir124-6 64 0.93 - - - 0.930 - - - - - microRNA 124-6
70. polg2 ENSDARG00000074933 117 0.929 - - - 0.929 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
71. ybey ENSDARG00000011999, ENSDARG00000110510 73 0.927 - - - 0.927 - - - - - ybeY metalloendoribonuclease [Source:ZFIN;Acc:ZDB-GENE-030131-437]
72. tatdn3 ENSDARG00000054076 130 0.925 - - - 0.925 - - - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
73. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 0.922 - - - 0.922 - - - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
74. otof otof 127 0.922 - - - 0.922 - - - - -
75. WDR70 ENSDARG00000109022 265 0.921 - - - 0.921 - - - - - WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
76. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 0.921 - - - 0.921 - - - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
77. NTAN1 ENSDARG00000105182 844 0.919 - - - - - 0.919 - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
78. ikbkb ENSDARG00000079123 498 0.919 - - - - - 0.919 - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
79. gb:ai877918 ENSDARG00000100179 173 0.919 - - - 0.919 - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
80. stim2 stim2 278 0.917 - - - 0.917 - - - - -
81. hsd17b4 ENSDARG00000101239 301 0.917 - - - 0.917 - - - - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
82. e4f1 ENSDARG00000038243 160 0.917 - - - 0.917 - - - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
83. FEZ2_1 FEZ2_1 153 0.914 - - - 0.914 - - - - -
84. dusp12 ENSDARG00000076330 173 0.914 - - - 0.914 - - - - - dual specificity phosphatase 12 [Source:ZFIN;Acc:ZDB-GENE-050626-91]
85. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.912 - - - 0.912 - - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
86. itga4 ENSDARG00000103056 223 0.911 - - - 0.911 - - - - - integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
87. ar ENSDARG00000067976, ENSDARG00000114287 192 0.911 - - - 0.911 - - - - - androgen receptor [Source:ZFIN;Acc:ZDB-GENE-060131-1]
88. dcun1d4 ENSDARG00000092394 258 0.91 - - - 0.910 - - - - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
89. bicc2 ENSDARG00000076557 77 0.91 - - - - - - - 0.910 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
90. CPAMD8 ENSDARG00000056530 3481 0.91 - - - 0.910 - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
91. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 0.907 - - - 0.907 - - - - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
92. nptnb ENSDARG00000043864 165 0.907 - - - 0.907 - - - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
93. arhgap10 ENSDARG00000078326 994 0.907 - - - 0.907 - - - - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
94. sox7 ENSDARG00000030125 806 0.907 - - - 0.907 - - - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
95. exoc3l4 ENSDARG00000058180 923 0.907 - - - 0.907 - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
96. CABZ01032467.1 CABZ01032467.1 400 0.903 - - - 0.903 - - - - -
97. zfr2 ENSDARG00000071683 780 0.902 - - - 0.902 - - - - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
98. APH1A APH1A 129 0.902 - - - 0.902 - - - - -
99. ECM1 ECM1 87 0.902 - - - 0.902 - - - - -
100. zgc:162232 zgc:162232 251 0.898 - - - 0.898 - - - - -

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA